EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSONIG00000013748 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: probable ATP-dependent RNA helicase ddx6
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Minus strand
Length: 5628 bases
Position: chrGL831186.1:2767632-2773259
Accession: 100707815
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000017295	DEAD	PF00270.29	1.7e-42	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000017310	-	1495	-	ENSONIP00000017295	487 (aa)	XP_013128042	I3K850

Gene Model

Click here to download ENSONIG00000013748's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000013748's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSONIG00000013748	-	78	30.846	ENSONIG00000012063	ddx4	82	30.846
ENSONIG00000013748	-	81	36.341	ENSONIG00000008122	DDX39A	93	36.341
ENSONIG00000013748	-	76	30.807	ENSONIG00000016252	-	58	30.788
ENSONIG00000013748	-	76	31.343	ENSONIG00000015293	-	57	31.343
ENSONIG00000013748	-	72	31.856	ENSONIG00000018880	si:dkey-156n14.5	76	30.408
ENSONIG00000013748	-	72	36.813	ENSONIG00000019360	ddx19	74	36.813
ENSONIG00000013748	-	76	31.643	ENSONIG00000017048	ddx23	52	31.655
ENSONIG00000013748	-	76	30.105	ENSONIG00000018269	DDX5	57	30.685
ENSONIG00000013748	-	81	31.373	ENSONIG00000012731	ddx49	85	31.373
ENSONIG00000013748	-	76	40.054	ENSONIG00000010685	eif4a2	90	40.054
ENSONIG00000013748	-	76	30.263	ENSONIG00000012538	ddx59	63	30.263
ENSONIG00000013748	-	76	39.247	ENSONIG00000000606	eif4a1b	92	39.247
ENSONIG00000013748	-	68	31.856	ENSONIG00000015311	ddx55	59	31.856
ENSONIG00000013748	-	75	30.423	ENSONIG00000017785	DDX41	60	30.423
ENSONIG00000013748	-	72	35.230	ENSONIG00000016602	zgc:193690	76	35.501
ENSONIG00000013748	-	98	88.075	ENSONIG00000011418	ddx61	99	88.075
ENSONIG00000013748	-	71	34.463	ENSONIG00000001195	ddx43	53	34.463
ENSONIG00000013748	-	81	32.170	ENSONIG00000008325	ddx47	87	32.170
ENSONIG00000013748	-	79	34.171	ENSONIG00000012436	ddx20	53	34.171
ENSONIG00000013748	-	77	37.302	ENSONIG00000019828	eif4a3	92	37.302
ENSONIG00000013748	-	97	82.845	ENSONIG00000005756	ddx6	99	82.645
ENSONIG00000013748	-	72	31.389	ENSONIG00000008402	-	56	31.667
ENSONIG00000013748	-	78	35.751	ENSONIG00000004740	ddx39b	95	35.071
ENSONIG00000013748	-	66	31.915	ENSONIG00000007887	ddx18	50	31.915
ENSONIG00000013748	-	67	45.098	ENSONIG00000000513	ddx1	52	45.098
ENSONIG00000013748	-	81	35.840	ENSONIG00000018177	ddx39aa	93	35.840

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000013748	-	98	87.866	ENSAPOG00000014829	ddx61	98	87.866	Acanthochromis_polyacanthus
ENSONIG00000013748	-	77	97.067	ENSAPOG00000023627	-	95	97.067	Acanthochromis_polyacanthus
ENSONIG00000013748	-	100	92.197	ENSACIG00000018355	-	100	92.197	Amphilophus_citrinellus
ENSONIG00000013748	-	100	96.319	ENSAOCG00000006269	-	100	96.319	Amphiprion_ocellaris
ENSONIG00000013748	-	98	88.912	ENSAOCG00000007627	ddx61	98	88.912	Amphiprion_ocellaris
ENSONIG00000013748	-	98	88.912	ENSAPEG00000007293	ddx61	98	88.912	Amphiprion_percula
ENSONIG00000013748	-	100	96.319	ENSAPEG00000020642	-	100	96.319	Amphiprion_percula
ENSONIG00000013748	-	100	96.319	ENSAPEG00000021368	-	100	96.319	Amphiprion_percula
ENSONIG00000013748	-	100	95.910	ENSATEG00000005424	-	100	95.910	Anabas_testudineus
ENSONIG00000013748	-	97	87.949	ENSATEG00000011302	ddx61	99	87.500	Anabas_testudineus
ENSONIG00000013748	-	99	87.759	ENSACLG00000027620	ddx61	99	87.759	Astatotilapia_calliptera
ENSONIG00000013748	-	100	99.795	ENSACLG00000003260	-	100	99.795	Astatotilapia_calliptera
ENSONIG00000013748	-	99	88.660	ENSAMXG00000033980	-	98	88.660	Astyanax_mexicanus
ENSONIG00000013748	-	97	87.815	ENSAMXG00000032542	ddx61	99	86.680	Astyanax_mexicanus
ENSONIG00000013748	-	100	94.479	ENSCSEG00000009893	-	100	94.479	Cynoglossus_semilaevis
ENSONIG00000013748	-	100	92.843	ENSCVAG00000011006	-	100	92.843	Cyprinodon_variegatus
ENSONIG00000013748	-	97	87.076	ENSDARG00000018425	ddx61	98	87.076	Danio_rerio
ENSONIG00000013748	-	99	89.980	ENSELUG00000022538	-	99	89.980	Esox_lucius
ENSONIG00000013748	-	99	89.212	ENSELUG00000020545	ddx61	99	89.212	Esox_lucius
ENSONIG00000013748	-	100	93.456	ENSFHEG00000015487	-	100	93.456	Fundulus_heteroclitus
ENSONIG00000013748	-	66	87.768	ENSGMOG00000003561	-	100	88.450	Gadus_morhua
ENSONIG00000013748	-	97	88.050	ENSGMOG00000013762	ddx61	99	87.734	Gadus_morhua
ENSONIG00000013748	-	100	92.653	ENSGAFG00000015865	-	100	92.653	Gambusia_affinis
ENSONIG00000013748	-	99	86.626	ENSGACG00000003401	ddx61	100	86.626	Gasterosteus_aculeatus
ENSONIG00000013748	-	99	95.021	ENSGACG00000002413	-	99	95.021	Gasterosteus_aculeatus
ENSONIG00000013748	-	100	99.795	ENSHBUG00000017033	-	100	99.795	Haplochromis_burtoni
ENSONIG00000013748	-	99	87.967	ENSHBUG00000017832	ddx61	99	87.967	Haplochromis_burtoni
ENSONIG00000013748	-	100	90.798	ENSHCOG00000012238	-	100	90.798	Hippocampus_comes
ENSONIG00000013748	-	97	85.381	ENSHCOG00000008184	ddx61	97	85.381	Hippocampus_comes
ENSONIG00000013748	-	97	89.429	ENSIPUG00000008367	-	98	89.053	Ictalurus_punctatus
ENSONIG00000013748	-	96	86.325	ENSIPUG00000012823	DDX6	99	85.031	Ictalurus_punctatus
ENSONIG00000013748	-	100	95.277	ENSKMAG00000007213	-	100	95.277	Kryptolebias_marmoratus
ENSONIG00000013748	-	97	88.608	ENSLBEG00000001740	ddx61	98	88.608	Labrus_bergylta
ENSONIG00000013748	-	100	93.952	ENSLBEG00000016890	-	100	93.952	Labrus_bergylta
ENSONIG00000013748	-	98	84.440	ENSLACG00000015214	ddx61	100	84.440	Latimeria_chalumnae
ENSONIG00000013748	-	96	49.894	ENSLOCG00000004352	ddx61	94	49.045	Lepisosteus_oculatus
ENSONIG00000013748	-	99	87.216	ENSMAMG00000005321	ddx61	99	87.216	Mastacembelus_armatus
ENSONIG00000013748	-	100	95.918	ENSMAMG00000005559	-	100	95.918	Mastacembelus_armatus
ENSONIG00000013748	-	99	87.967	ENSMZEG00005003556	ddx61	99	87.967	Maylandia_zebra
ENSONIG00000013748	-	100	99.795	ENSMZEG00005026268	-	100	99.795	Maylandia_zebra
ENSONIG00000013748	-	100	85.685	ENSMMOG00000013694	-	100	85.685	Mola_mola
ENSONIG00000013748	-	72	77.054	ENSMMOG00000008825	-	92	77.054	Mola_mola
ENSONIG00000013748	-	96	87.207	ENSMMOG00000007415	ddx61	97	87.207	Mola_mola
ENSONIG00000013748	-	100	94.274	ENSMALG00000013817	-	100	94.274	Monopterus_albus
ENSONIG00000013748	-	97	76.827	ENSMALG00000013776	ddx61	96	76.827	Monopterus_albus
ENSONIG00000013748	-	98	81.172	ENSNBRG00000015800	ddx61	99	81.172	Neolamprologus_brichardi
ENSONIG00000013748	-	100	92.813	ENSNBRG00000015075	-	100	92.813	Neolamprologus_brichardi
ENSONIG00000013748	-	100	93.429	ENSORLG00000009178	-	100	93.429	Oryzias_latipes
ENSONIG00000013748	-	100	93.634	ENSORLG00020015515	-	100	93.634	Oryzias_latipes_hni
ENSONIG00000013748	-	100	93.429	ENSORLG00015006764	-	100	93.429	Oryzias_latipes_hsok
ENSONIG00000013748	-	97	86.229	ENSOMEG00000022326	-	99	86.229	Oryzias_melastigma
ENSONIG00000013748	-	97	90.756	ENSPKIG00000024264	ddx61	98	90.229	Paramormyrops_kingsleyae
ENSONIG00000013748	-	100	83.607	ENSPMGG00000013355	-	100	83.607	Periophthalmus_magnuspinnatus
ENSONIG00000013748	-	100	93.089	ENSPFOG00000005750	-	100	93.089	Poecilia_formosa
ENSONIG00000013748	-	100	93.089	ENSPLAG00000000403	-	100	93.089	Poecilia_latipinna
ENSONIG00000013748	-	100	93.238	ENSPMEG00000023737	-	100	93.238	Poecilia_mexicana
ENSONIG00000013748	-	99	81.696	ENSPNYG00000015045	ddx61	99	81.696	Pundamilia_nyererei
ENSONIG00000013748	-	100	99.795	ENSPNYG00000003986	-	100	99.795	Pundamilia_nyererei
ENSONIG00000013748	-	99	90.289	ENSPNAG00000008742	-	98	90.289	Pygocentrus_nattereri
ENSONIG00000013748	-	98	87.083	ENSPNAG00000024072	ddx61	99	87.083	Pygocentrus_nattereri
ENSONIG00000013748	-	97	89.662	ENSSFOG00015021404	ddx61	97	88.981	Scleropages_formosus
ENSONIG00000013748	-	100	94.683	ENSSMAG00000001793	-	100	94.683	Scophthalmus_maximus
ENSONIG00000013748	-	96	88.699	ENSSMAG00000006591	ddx61	97	88.000	Scophthalmus_maximus
ENSONIG00000013748	-	96	89.339	ENSSDUG00000009713	ddx61	99	86.885	Seriola_dumerili
ENSONIG00000013748	-	100	96.735	ENSSDUG00000007530	-	100	96.735	Seriola_dumerili
ENSONIG00000013748	-	100	96.735	ENSSLDG00000007608	-	100	96.735	Seriola_lalandi_dorsalis
ENSONIG00000013748	-	96	89.339	ENSSLDG00000000132	ddx61	99	86.885	Seriola_lalandi_dorsalis
ENSONIG00000013748	-	96	90.385	ENSSPAG00000001578	ddx61	99	88.223	Stegastes_partitus
ENSONIG00000013748	-	100	97.342	ENSSPAG00000013878	-	100	97.342	Stegastes_partitus
ENSONIG00000013748	-	99	90.369	ENSTRUG00000012432	-	99	90.369	Takifugu_rubripes
ENSONIG00000013748	-	99	91.458	ENSTNIG00000003560	-	100	91.458	Tetraodon_nigroviridis
ENSONIG00000013748	-	100	83.061	ENSXCOG00000001406	-	100	83.061	Xiphophorus_couchianus
ENSONIG00000013748	-	100	93.061	ENSXMAG00000016090	-	100	93.061	Xiphophorus_maculatus