EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSONIG00000013803 (Gene tree)
Gene ID: -
Gene Symbol: pleca
Alias: -
Full Name: plectin a
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Minus strand
Length: 53950 bases
Position: chrGL831186.1:3322485-3376434
Accession: ZDB-GENE-030131-8984
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000017357	S10_plectin	PF03501.15	6.6e-36	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000017372	-	13980	-	ENSONIP00000017357	4659 (aa)	-	I3K8B2
ENSONIT00000017373	-	11769	-	ENSONIP00000017358	3922 (aa)	-	I3K8B3

Gene Model

Click here to download ENSONIG00000013803's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000013803's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000013803	pleca	99	71.451	ENSATEG00000024559	plecb	82	71.319	Anabas_testudineus
ENSONIG00000013803	pleca	99	71.935	ENSACLG00000022613	plecb	83	71.935	Astatotilapia_calliptera
ENSONIG00000013803	pleca	99	71.855	ENSCVAG00000013972	plecb	80	71.884	Cyprinodon_variegatus
ENSONIG00000013803	pleca	99	73.084	ENSELUG00000020803	plecb	82	73.024	Esox_lucius
ENSONIG00000013803	pleca	100	68.783	ENSGMOG00000006545	plecb	99	68.819	Gadus_morhua
ENSONIG00000013803	pleca	100	70.481	ENSGACG00000005431	plecb	100	72.979	Gasterosteus_aculeatus
ENSONIG00000013803	pleca	99	70.517	ENSIPUG00000020055	plecb	81	71.097	Ictalurus_punctatus
ENSONIG00000013803	pleca	99	70.244	ENSKMAG00000003609	plecb	99	70.283	Kryptolebias_marmoratus
ENSONIG00000013803	pleca	99	71.984	ENSLBEG00000004779	plecb	80	71.801	Labrus_bergylta
ENSONIG00000013803	pleca	99	71.714	ENSMAMG00000001487	plecb	82	71.714	Mastacembelus_armatus
ENSONIG00000013803	pleca	99	71.078	ENSORLG00000023311	plecb	83	71.095	Oryzias_latipes
ENSONIG00000013803	pleca	99	71.033	ENSORLG00020001716	plecb	83	71.050	Oryzias_latipes_hni
ENSONIG00000013803	pleca	99	71.011	ENSORLG00015017959	plecb	83	71.027	Oryzias_latipes_hsok
ENSONIG00000013803	pleca	99	70.945	ENSOMEG00000011949	plecb	83	70.967	Oryzias_melastigma
ENSONIG00000013803	pleca	99	74.453	ENSPKIG00000014989	pleca	89	74.397	Paramormyrops_kingsleyae
ENSONIG00000013803	pleca	99	71.435	ENSPMEG00000014762	plecb	83	71.480	Poecilia_mexicana
ENSONIG00000013803	pleca	99	71.189	ENSPREG00000014625	plecb	83	71.233	Poecilia_reticulata
ENSONIG00000013803	pleca	100	73.453	ENSPNAG00000001581	plecb	79	73.613	Pygocentrus_nattereri
ENSONIG00000013803	pleca	98	71.949	ENSSMAG00000007821	plecb	81	71.859	Scophthalmus_maximus
ENSONIG00000013803	pleca	100	71.028	ENSTRUG00000003715	plecb	84	71.037	Takifugu_rubripes