EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSONIG00000013889 (Gene tree)
Gene ID: -
Gene Symbol: dkc1
Alias: -
Full Name: dyskerin pseudouridine synthase 1
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Minus strand
Length: 6575 bases
Position: chrGL831913.1:55152-61726
Accession: 100711985
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000017462	TruB_N	PF01509.18	2.4e-21	1	1
ENSONIP00000017461	TruB_N	PF01509.18	1.8e-20	1	1
ENSONIP00000017461	PUA	PF01472.20	4e-17	1	1
ENSONIP00000017462	PUA	PF01472.20	4.2e-17	1	1
ENSONIP00000017461	DKCLD	PF08068.12	6.6e-31	1	1
ENSONIP00000017462	DKCLD	PF08068.12	7.2e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000017477	-	1557	-	ENSONIP00000017462	519 (aa)	-	I3K8L7
ENSONIT00000017476	-	3321	-	ENSONIP00000017461	501 (aa)	XP_019204627	I3K8L6

Gene Model

Click here to download ENSONIG00000013889's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000013889's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000013889	dkc1	95	77.800	ENSG00000130826	DKC1	99	88.780	Homo_sapiens
ENSONIG00000013889	dkc1	93	90.063	ENSAPOG00000007799	dkc1	97	88.844	Acanthochromis_polyacanthus
ENSONIG00000013889	dkc1	89	80.631	ENSAMEG00000002776	DKC1	79	87.469	Ailuropoda_melanoleuca
ENSONIG00000013889	dkc1	95	91.649	ENSACIG00000022614	dkc1	97	91.649	Amphilophus_citrinellus
ENSONIG00000013889	dkc1	97	89.047	ENSAOCG00000013159	dkc1	95	88.273	Amphiprion_ocellaris
ENSONIG00000013889	dkc1	97	89.047	ENSAPEG00000002284	dkc1	97	88.641	Amphiprion_percula
ENSONIG00000013889	dkc1	93	86.164	ENSATEG00000013682	dkc1	96	85.714	Anabas_testudineus
ENSONIG00000013889	dkc1	97	75.429	ENSACAG00000015600	DKC1	87	75.048	Anolis_carolinensis
ENSONIG00000013889	dkc1	86	82.353	ENSANAG00000022732	DKC1	86	82.353	Aotus_nancymaae
ENSONIG00000013889	dkc1	96	91.684	ENSACLG00000015605	dkc1	98	91.684	Astatotilapia_calliptera
ENSONIG00000013889	dkc1	86	87.643	ENSAMXG00000017108	dkc1	93	83.716	Astyanax_mexicanus
ENSONIG00000013889	dkc1	91	79.258	ENSBTAG00000013045	DKC1	87	81.674	Bos_taurus
ENSONIG00000013889	dkc1	82	65.526	WBGene00010478	K01G5.5	97	62.500	Caenorhabditis_elegans
ENSONIG00000013889	dkc1	95	77.846	ENSCJAG00000004210	DKC1	94	77.642	Callithrix_jacchus
ENSONIG00000013889	dkc1	79	77.778	ENSCAFG00000009311	-	78	77.778	Canis_familiaris
ENSONIG00000013889	dkc1	89	80.313	ENSCAFG00000019620	-	81	84.086	Canis_familiaris
ENSONIG00000013889	dkc1	89	80.313	ENSCAFG00020008918	-	81	84.086	Canis_lupus_dingo
ENSONIG00000013889	dkc1	81	74.939	ENSCAFG00020009379	-	78	74.939	Canis_lupus_dingo
ENSONIG00000013889	dkc1	91	79.039	ENSCHIG00000017392	DKC1	87	81.222	Capra_hircus
ENSONIG00000013889	dkc1	86	80.531	ENSTSYG00000007681	DKC1	86	80.531	Carlito_syrichta
ENSONIG00000013889	dkc1	79	81.818	ENSCAPG00000003342	DKC1	92	81.418	Cavia_aperea
ENSONIG00000013889	dkc1	85	82.273	ENSCPOG00000008825	DKC1	86	81.900	Cavia_porcellus
ENSONIG00000013889	dkc1	86	72.624	ENSCCAG00000027418	DKC1	85	72.624	Cebus_capucinus
ENSONIG00000013889	dkc1	95	77.393	ENSCATG00000033602	DKC1	94	77.189	Cercocebus_atys
ENSONIG00000013889	dkc1	85	82.313	ENSCLAG00000000720	DKC1	87	81.941	Chinchilla_lanigera
ENSONIG00000013889	dkc1	95	77.393	ENSCSAG00000006706	DKC1	94	77.189	Chlorocebus_sabaeus
ENSONIG00000013889	dkc1	87	81.306	ENSCPBG00000005858	DKC1	85	87.469	Chrysemys_picta_bellii
ENSONIG00000013889	dkc1	79	80.353	ENSCING00000004599	-	83	74.828	Ciona_intestinalis
ENSONIG00000013889	dkc1	79	80.000	ENSCSAVG00000010047	-	93	76.850	Ciona_savignyi
ENSONIG00000013889	dkc1	95	77.393	ENSCANG00000027987	DKC1	94	77.189	Colobus_angolensis_palliatus
ENSONIG00000013889	dkc1	86	81.448	ENSCGRG00001014574	-	86	81.448	Cricetulus_griseus_chok1gshd
ENSONIG00000013889	dkc1	76	67.192	ENSCGRG00001016789	-	79	67.838	Cricetulus_griseus_chok1gshd
ENSONIG00000013889	dkc1	86	81.448	ENSCGRG00000016075	-	86	81.448	Cricetulus_griseus_crigri
ENSONIG00000013889	dkc1	76	67.192	ENSCGRG00000014809	-	77	67.838	Cricetulus_griseus_crigri
ENSONIG00000013889	dkc1	93	86.510	ENSCSEG00000012633	dkc1	96	86.739	Cynoglossus_semilaevis
ENSONIG00000013889	dkc1	96	84.538	ENSCVAG00000010155	dkc1	90	89.655	Cyprinodon_variegatus
ENSONIG00000013889	dkc1	87	89.401	ENSDARG00000016484	dkc1	97	82.688	Danio_rerio
ENSONIG00000013889	dkc1	86	82.063	ENSDNOG00000004218	DKC1	86	82.247	Dasypus_novemcinctus
ENSONIG00000013889	dkc1	55	73.285	ENSDORG00000013566	-	91	73.285	Dipodomys_ordii
ENSONIG00000013889	dkc1	86	69.725	FBgn0259937	Nop60B	88	70.500	Drosophila_melanogaster
ENSONIG00000013889	dkc1	86	79.684	ENSETEG00000016095	DKC1	90	79.684	Echinops_telfairi
ENSONIG00000013889	dkc1	66	77.812	ENSEBUG00000015962	dkc1	98	81.787	Eptatretus_burgeri
ENSONIG00000013889	dkc1	91	78.742	ENSEASG00005007484	DKC1	87	80.132	Equus_asinus_asinus
ENSONIG00000013889	dkc1	94	77.263	ENSECAG00000023524	DKC1	87	80.132	Equus_caballus
ENSONIG00000013889	dkc1	78	87.724	ENSEEUG00000003323	DKC1	98	83.855	Erinaceus_europaeus
ENSONIG00000013889	dkc1	86	89.352	ENSELUG00000014538	dkc1	96	84.631	Esox_lucius
ENSONIG00000013889	dkc1	85	82.005	ENSFCAG00000006577	DKC1	86	82.192	Felis_catus
ENSONIG00000013889	dkc1	85	82.167	ENSFALG00000011496	DKC1	85	82.040	Ficedula_albicollis
ENSONIG00000013889	dkc1	94	76.701	ENSFDAG00000002516	DKC1	94	76.289	Fukomys_damarensis
ENSONIG00000013889	dkc1	97	84.891	ENSFHEG00000004627	dkc1	97	89.117	Fundulus_heteroclitus
ENSONIG00000013889	dkc1	78	90.026	ENSGMOG00000017277	dkc1	100	90.026	Gadus_morhua
ENSONIG00000013889	dkc1	88	82.301	ENSGALG00000005054	DKC1	95	77.189	Gallus_gallus
ENSONIG00000013889	dkc1	86	92.361	ENSGAFG00000011486	dkc1	83	89.095	Gambusia_affinis
ENSONIG00000013889	dkc1	79	93.970	ENSGACG00000004373	dkc1	96	94.529	Gasterosteus_aculeatus
ENSONIG00000013889	dkc1	87	81.982	ENSGAGG00000011330	DKC1	84	84.101	Gopherus_agassizii
ENSONIG00000013889	dkc1	95	77.800	ENSGGOG00000001045	DKC1	94	77.597	Gorilla_gorilla
ENSONIG00000013889	dkc1	100	96.614	ENSHBUG00000012436	dkc1	100	96.614	Haplochromis_burtoni
ENSONIG00000013889	dkc1	83	83.333	ENSHGLG00000000649	DKC1	85	82.460	Heterocephalus_glaber_female
ENSONIG00000013889	dkc1	83	83.333	ENSHGLG00100001153	DKC1	86	82.460	Heterocephalus_glaber_male
ENSONIG00000013889	dkc1	96	86.242	ENSHCOG00000021099	dkc1	85	90.421	Hippocampus_comes
ENSONIG00000013889	dkc1	86	87.215	ENSIPUG00000010309	dkc1	93	84.440	Ictalurus_punctatus
ENSONIG00000013889	dkc1	86	75.231	ENSSTOG00000020149	-	85	75.231	Ictidomys_tridecemlineatus
ENSONIG00000013889	dkc1	86	81.490	ENSSTOG00000001074	-	91	81.490	Ictidomys_tridecemlineatus
ENSONIG00000013889	dkc1	94	67.213	ENSSTOG00000011904	-	91	66.395	Ictidomys_tridecemlineatus
ENSONIG00000013889	dkc1	55	73.646	ENSJJAG00000010086	-	92	73.646	Jaculus_jaculus
ENSONIG00000013889	dkc1	89	87.723	ENSKMAG00000008010	dkc1	95	87.789	Kryptolebias_marmoratus
ENSONIG00000013889	dkc1	89	91.759	ENSLBEG00000019122	dkc1	92	91.759	Labrus_bergylta
ENSONIG00000013889	dkc1	85	83.333	ENSLACG00000014025	DKC1	90	87.374	Latimeria_chalumnae
ENSONIG00000013889	dkc1	87	87.302	ENSLOCG00000013713	dkc1	88	89.810	Lepisosteus_oculatus
ENSONIG00000013889	dkc1	86	81.798	ENSLAFG00000000221	DKC1	86	82.353	Loxodonta_africana
ENSONIG00000013889	dkc1	95	77.393	ENSMFAG00000032398	DKC1	81	77.189	Macaca_fascicularis
ENSONIG00000013889	dkc1	95	77.393	ENSMMUG00000005768	DKC1	94	77.189	Macaca_mulatta
ENSONIG00000013889	dkc1	95	77.393	ENSMNEG00000034503	DKC1	94	77.189	Macaca_nemestrina
ENSONIG00000013889	dkc1	95	77.393	ENSMLEG00000034422	DKC1	94	77.189	Mandrillus_leucophaeus
ENSONIG00000013889	dkc1	82	94.390	ENSMAMG00000005427	dkc1	90	95.037	Mastacembelus_armatus
ENSONIG00000013889	dkc1	100	96.813	ENSMZEG00005014503	dkc1	100	96.813	Maylandia_zebra
ENSONIG00000013889	dkc1	77	85.859	ENSMGAG00000009238	DKC1	94	79.724	Meleagris_gallopavo
ENSONIG00000013889	dkc1	55	72.563	ENSMAUG00000016454	-	91	72.563	Mesocricetus_auratus
ENSONIG00000013889	dkc1	79	74.390	ENSMICG00000002818	-	99	77.198	Microcebus_murinus
ENSONIG00000013889	dkc1	86	81.735	ENSMICG00000038751	-	87	81.735	Microcebus_murinus
ENSONIG00000013889	dkc1	55	68.953	ENSMOCG00000001169	-	91	68.953	Microtus_ochrogaster
ENSONIG00000013889	dkc1	82	94.132	ENSMMOG00000020348	dkc1	86	94.949	Mola_mola
ENSONIG00000013889	dkc1	85	82.176	ENSMODG00000009243	DKC1	89	72.461	Monodelphis_domestica
ENSONIG00000013889	dkc1	99	86.627	ENSMALG00000009454	dkc1	95	87.037	Monopterus_albus
ENSONIG00000013889	dkc1	85	70.917	MGP_CAROLIEiJ_G0033191	Dkc1	86	83.333	Mus_caroli
ENSONIG00000013889	dkc1	86	81.448	ENSMUSG00000031403	Dkc1	87	81.448	Mus_musculus
ENSONIG00000013889	dkc1	85	81.279	MGP_PahariEiJ_G0031735	Dkc1	86	81.279	Mus_pahari
ENSONIG00000013889	dkc1	86	81.448	MGP_SPRETEiJ_G0034351	Dkc1	86	81.448	Mus_spretus
ENSONIG00000013889	dkc1	92	79.565	ENSMPUG00000016136	DKC1	83	80.761	Mustela_putorius_furo
ENSONIG00000013889	dkc1	92	74.675	ENSMLUG00000011918	DKC1	91	75.053	Myotis_lucifugus
ENSONIG00000013889	dkc1	55	73.646	ENSNGAG00000015724	-	92	73.646	Nannospalax_galili
ENSONIG00000013889	dkc1	84	97.381	ENSNBRG00000005638	dkc1	85	97.381	Neolamprologus_brichardi
ENSONIG00000013889	dkc1	96	77.126	ENSNLEG00000014323	DKC1	95	76.923	Nomascus_leucogenys
ENSONIG00000013889	dkc1	81	82.555	ENSMEUG00000001066	DKC1	89	82.759	Notamacropus_eugenii
ENSONIG00000013889	dkc1	69	80.747	ENSOPRG00000005248	DKC1	69	80.747	Ochotona_princeps
ENSONIG00000013889	dkc1	83	86.019	ENSODEG00000011816	-	86	83.790	Octodon_degus
ENSONIG00000013889	dkc1	55	73.285	ENSODEG00000000549	-	91	73.285	Octodon_degus
ENSONIG00000013889	dkc1	83	84.615	ENSOANG00000008713	-	88	84.615	Ornithorhynchus_anatinus
ENSONIG00000013889	dkc1	56	62.914	ENSOANG00000022295	-	84	63.036	Ornithorhynchus_anatinus
ENSONIG00000013889	dkc1	86	81.633	ENSOCUG00000012646	DKC1	86	81.633	Oryctolagus_cuniculus
ENSONIG00000013889	dkc1	90	87.140	ENSORLG00000018748	dkc1	84	87.617	Oryzias_latipes
ENSONIG00000013889	dkc1	97	86.448	ENSOMEG00000005786	dkc1	87	87.393	Oryzias_melastigma
ENSONIG00000013889	dkc1	86	80.752	ENSOGAG00000003399	DKC1	86	80.752	Otolemur_garnettii
ENSONIG00000013889	dkc1	91	79.039	ENSOARG00000003047	DKC1	87	81.448	Ovis_aries
ENSONIG00000013889	dkc1	96	74.803	ENSPPAG00000023820	DKC1	94	74.600	Pan_paniscus
ENSONIG00000013889	dkc1	85	82.005	ENSPPRG00000009104	DKC1	86	82.192	Panthera_pardus
ENSONIG00000013889	dkc1	85	83.099	ENSPTIG00000017469	DKC1	86	83.294	Panthera_tigris_altaica
ENSONIG00000013889	dkc1	95	77.800	ENSPTRG00000022449	DKC1	94	77.597	Pan_troglodytes
ENSONIG00000013889	dkc1	86	82.127	ENSPTRG00000043416	-	75	82.127	Pan_troglodytes
ENSONIG00000013889	dkc1	95	77.393	ENSPANG00000011978	DKC1	94	77.189	Papio_anubis
ENSONIG00000013889	dkc1	84	88.498	ENSPKIG00000008443	dkc1	98	83.656	Paramormyrops_kingsleyae
ENSONIG00000013889	dkc1	71	90.503	ENSPSIG00000013765	DKC1	86	90.503	Pelodiscus_sinensis
ENSONIG00000013889	dkc1	95	76.200	ENSPMGG00000004097	dkc1	89	78.807	Periophthalmus_magnuspinnatus
ENSONIG00000013889	dkc1	71	86.034	ENSPEMG00000013348	Dkc1	84	86.034	Peromyscus_maniculatus_bairdii
ENSONIG00000013889	dkc1	83	84.689	ENSPCIG00000016706	DKC1	72	83.796	Phascolarctos_cinereus
ENSONIG00000013889	dkc1	86	92.379	ENSPFOG00000018653	dkc1	93	90.578	Poecilia_formosa
ENSONIG00000013889	dkc1	86	92.379	ENSPLAG00000003272	dkc1	84	90.578	Poecilia_latipinna
ENSONIG00000013889	dkc1	86	92.379	ENSPMEG00000010413	dkc1	93	90.578	Poecilia_mexicana
ENSONIG00000013889	dkc1	86	92.379	ENSPREG00000004100	dkc1	91	89.871	Poecilia_reticulata
ENSONIG00000013889	dkc1	86	82.127	ENSPPYG00000020892	DKC1	87	82.127	Pongo_abelii
ENSONIG00000013889	dkc1	75	86.898	ENSPCAG00000015034	DKC1	73	86.898	Procavia_capensis
ENSONIG00000013889	dkc1	86	81.716	ENSPCOG00000026874	DKC1	86	81.716	Propithecus_coquereli
ENSONIG00000013889	dkc1	94	78.481	ENSPVAG00000009222	DKC1	93	78.270	Pteropus_vampyrus
ENSONIG00000013889	dkc1	96	92.495	ENSPNYG00000020063	dkc1	98	92.495	Pundamilia_nyererei
ENSONIG00000013889	dkc1	87	87.016	ENSPNAG00000005780	dkc1	85	87.963	Pygocentrus_nattereri
ENSONIG00000013889	dkc1	86	77.703	ENSRNOG00000055562	Dkc1	87	77.703	Rattus_norvegicus
ENSONIG00000013889	dkc1	95	77.393	ENSRBIG00000028457	DKC1	81	77.189	Rhinopithecus_bieti
ENSONIG00000013889	dkc1	95	77.393	ENSRROG00000044780	DKC1	94	77.189	Rhinopithecus_roxellana
ENSONIG00000013889	dkc1	76	71.540	YLR175W	-	87	67.780	Saccharomyces_cerevisiae
ENSONIG00000013889	dkc1	86	81.900	ENSSBOG00000033746	DKC1	86	81.900	Saimiri_boliviensis_boliviensis
ENSONIG00000013889	dkc1	89	81.223	ENSSHAG00000002463	DKC1	92	83.028	Sarcophilus_harrisii
ENSONIG00000013889	dkc1	86	87.016	ENSSFOG00015009585	dkc1	86	87.414	Scleropages_formosus
ENSONIG00000013889	dkc1	89	89.310	ENSSMAG00000002552	dkc1	88	89.310	Scophthalmus_maximus
ENSONIG00000013889	dkc1	97	88.548	ENSSDUG00000009963	dkc1	97	88.115	Seriola_dumerili
ENSONIG00000013889	dkc1	91	88.377	ENSSLDG00000019342	dkc1	89	89.640	Seriola_lalandi_dorsalis
ENSONIG00000013889	dkc1	86	78.829	ENSSARG00000001822	DKC1	88	79.233	Sorex_araneus
ENSONIG00000013889	dkc1	80	86.466	ENSSPUG00000018907	DKC1	86	79.867	Sphenodon_punctatus
ENSONIG00000013889	dkc1	94	88.445	ENSSPAG00000002585	dkc1	90	88.819	Stegastes_partitus
ENSONIG00000013889	dkc1	94	76.695	ENSSSCG00000012823	DKC1	91	80.594	Sus_scrofa
ENSONIG00000013889	dkc1	72	91.713	ENSTGUG00000006781	DKC1	88	84.938	Taeniopygia_guttata
ENSONIG00000013889	dkc1	97	86.653	ENSTRUG00000004413	dkc1	97	85.832	Takifugu_rubripes
ENSONIG00000013889	dkc1	90	72.198	ENSTNIG00000002582	dkc1	90	72.354	Tetraodon_nigroviridis
ENSONIG00000013889	dkc1	63	78.981	ENSTBEG00000011262	DKC1	86	79.365	Tupaia_belangeri
ENSONIG00000013889	dkc1	55	87.726	ENSTTRG00000008089	DKC1	55	87.726	Tursiops_truncatus
ENSONIG00000013889	dkc1	92	78.788	ENSUAMG00000022721	DKC1	88	84.450	Ursus_americanus
ENSONIG00000013889	dkc1	92	78.355	ENSUMAG00000016899	DKC1	97	84.887	Ursus_maritimus
ENSONIG00000013889	dkc1	85	68.852	ENSVVUG00000021671	-	78	68.852	Vulpes_vulpes
ENSONIG00000013889	dkc1	89	79.075	ENSVVUG00000020734	-	73	82.710	Vulpes_vulpes
ENSONIG00000013889	dkc1	100	78.088	ENSXETG00000032517	DKC1	99	76.125	Xenopus_tropicalis
ENSONIG00000013889	dkc1	87	91.055	ENSXCOG00000005498	dkc1	92	91.628	Xiphophorus_couchianus
ENSONIG00000013889	dkc1	87	92.414	ENSXMAG00000004919	dkc1	97	89.095	Xiphophorus_maculatus