EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSONIG00000013960 (Gene tree)
Gene ID: -
Gene Symbol: zfr
Alias: -
Full Name: zinc finger RNA binding protein
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Plus strand
Length: 75486 bases
Position: chrGL831364.1:938663-1014148
Accession: ZDB-GENE-030131-378
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000017545	DZF	PF07528.14	7.1e-54	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000017560	-	3051	-	ENSONIP00000017545	1016 (aa)	-	I3K8V0

Gene Model

Click here to download ENSONIG00000013960's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000013960's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSONIG00000013960	zfr	78	53.273	ENSONIG00000001871	zfr2	81	51.820

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000013960	zfr	100	60.350	ENSG00000056097	ZFR	98	72.778	Homo_sapiens
ENSONIG00000013960	zfr	74	87.143	ENSAPOG00000009740	zfr	79	86.667	Acanthochromis_polyacanthus
ENSONIG00000013960	zfr	59	99.448	ENSACIG00000015926	zfr	78	85.366	Amphilophus_citrinellus
ENSONIG00000013960	zfr	74	86.364	ENSAOCG00000013876	zfr	79	82.040	Amphiprion_ocellaris
ENSONIG00000013960	zfr	74	88.278	ENSAPEG00000024383	zfr	80	83.814	Amphiprion_percula
ENSONIG00000013960	zfr	74	87.560	ENSATEG00000010271	zfr	100	67.857	Anabas_testudineus
ENSONIG00000013960	zfr	79	75.359	ENSACAG00000007880	ZFR	100	59.276	Anolis_carolinensis
ENSONIG00000013960	zfr	100	60.350	ENSANAG00000023333	ZFR	100	60.902	Aotus_nancymaae
ENSONIG00000013960	zfr	59	99.448	ENSACLG00000016832	zfr	100	63.806	Astatotilapia_calliptera
ENSONIG00000013960	zfr	76	83.254	ENSAMXG00000019511	zfr	79	79.157	Astyanax_mexicanus
ENSONIG00000013960	zfr	77	54.026	ENSBTAG00000008414	ZFR	100	60.531	Bos_taurus
ENSONIG00000013960	zfr	93	84.127	ENSCJAG00000018740	ZFR	100	60.810	Callithrix_jacchus
ENSONIG00000013960	zfr	59	84.127	ENSCAFG00020016859	-	100	60.348	Canis_lupus_dingo
ENSONIG00000013960	zfr	96	59.117	ENSTSYG00000010670	ZFR	99	59.750	Carlito_syrichta
ENSONIG00000013960	zfr	63	65.479	ENSCAPG00000015655	ZFR	100	49.451	Cavia_aperea
ENSONIG00000013960	zfr	96	55.512	ENSCPOG00000000862	ZFR	100	56.280	Cavia_porcellus
ENSONIG00000013960	zfr	100	60.350	ENSCCAG00000024473	ZFR	100	60.902	Cebus_capucinus
ENSONIG00000013960	zfr	100	60.166	ENSCATG00000038311	ZFR	100	60.718	Cercocebus_atys
ENSONIG00000013960	zfr	67	70.118	ENSCHOG00000003848	ZFR	68	69.822	Choloepus_hoffmanni
ENSONIG00000013960	zfr	100	60.166	ENSCANG00000017807	ZFR	100	60.718	Colobus_angolensis_palliatus
ENSONIG00000013960	zfr	74	84.248	ENSCSEG00000011169	ZFR	80	80.000	Cynoglossus_semilaevis
ENSONIG00000013960	zfr	71	85.132	ENSCSEG00000009224	zfr	78	80.889	Cynoglossus_semilaevis
ENSONIG00000013960	zfr	73	84.412	ENSCVAG00000016494	zfr	80	80.222	Cyprinodon_variegatus
ENSONIG00000013960	zfr	79	81.087	ENSDARG00000027109	zfr	81	76.096	Danio_rerio
ENSONIG00000013960	zfr	79	73.986	ENSETEG00000008937	ZFR	83	71.239	Echinops_telfairi
ENSONIG00000013960	zfr	80	55.991	ENSECAG00000012851	ZFR	99	57.447	Equus_caballus
ENSONIG00000013960	zfr	73	69.359	ENSEEUG00000014206	ZFR	75	68.660	Erinaceus_europaeus
ENSONIG00000013960	zfr	72	76.112	ENSELUG00000022743	zfr	77	72.609	Esox_lucius
ENSONIG00000013960	zfr	66	91.892	ENSGMOG00000003967	zfr	93	90.323	Gadus_morhua
ENSONIG00000013960	zfr	77	81.418	ENSGACG00000005045	zfr	100	64.183	Gasterosteus_aculeatus
ENSONIG00000013960	zfr	100	60.258	ENSGGOG00000016302	ZFR	100	60.810	Gorilla_gorilla
ENSONIG00000013960	zfr	72	78.198	ENSHGLG00000008088	ZFR	100	60.534	Heterocephalus_glaber_female
ENSONIG00000013960	zfr	74	83.254	ENSIPUG00000008192	zfr	82	79.157	Ictalurus_punctatus
ENSONIG00000013960	zfr	100	60.037	ENSSTOG00000008742	ZFR	100	60.500	Ictidomys_tridecemlineatus
ENSONIG00000013960	zfr	80	74.463	ENSJJAG00000023064	Zfr	99	59.224	Jaculus_jaculus
ENSONIG00000013960	zfr	64	84.049	ENSKMAG00000009468	zfr	76	80.516	Kryptolebias_marmoratus
ENSONIG00000013960	zfr	74	86.782	ENSLBEG00000010783	zfr	84	80.795	Labrus_bergylta
ENSONIG00000013960	zfr	79	70.922	ENSLACG00000000831	ZFR	100	57.987	Latimeria_chalumnae
ENSONIG00000013960	zfr	79	82.297	ENSLOCG00000006727	zfr	100	63.026	Lepisosteus_oculatus
ENSONIG00000013960	zfr	98	59.475	ENSLAFG00000002308	ZFR	100	60.721	Loxodonta_africana
ENSONIG00000013960	zfr	100	59.246	ENSMFAG00000042691	ZFR	100	59.798	Macaca_fascicularis
ENSONIG00000013960	zfr	100	60.166	ENSMMUG00000001317	ZFR	100	60.718	Macaca_mulatta
ENSONIG00000013960	zfr	100	60.166	ENSMNEG00000029441	ZFR	100	60.718	Macaca_nemestrina
ENSONIG00000013960	zfr	74	85.879	ENSMAMG00000017351	zfr	100	63.553	Mastacembelus_armatus
ENSONIG00000013960	zfr	59	99.448	ENSMZEG00005021243	zfr	100	63.806	Maylandia_zebra
ENSONIG00000013960	zfr	100	60.258	ENSMICG00000001244	ZFR	100	60.626	Microcebus_murinus
ENSONIG00000013960	zfr	72	77.907	ENSMOCG00000018630	Zfr	100	60.737	Microtus_ochrogaster
ENSONIG00000013960	zfr	74	87.081	ENSMMOG00000012585	zfr	71	81.596	Mola_mola
ENSONIG00000013960	zfr	79	75.418	ENSMODG00000020412	ZFR	100	61.624	Monodelphis_domestica
ENSONIG00000013960	zfr	74	87.560	ENSMALG00000007123	zfr	94	96.774	Monopterus_albus
ENSONIG00000013960	zfr	100	60.202	MGP_CAROLIEiJ_G0019681	Zfr	100	70.199	Mus_caroli
ENSONIG00000013960	zfr	100	60.478	ENSMUSG00000022201	Zfr	99	79.480	Mus_musculus
ENSONIG00000013960	zfr	100	60.294	MGP_PahariEiJ_G0016057	Zfr	100	69.868	Mus_pahari
ENSONIG00000013960	zfr	71	54.250	ENSMPUG00000015193	-	99	55.125	Mustela_putorius_furo
ENSONIG00000013960	zfr	69	77.303	ENSMLUG00000011797	ZFR	99	60.057	Myotis_lucifugus
ENSONIG00000013960	zfr	59	99.448	ENSNBRG00000008378	zfr	100	63.899	Neolamprologus_brichardi
ENSONIG00000013960	zfr	96	59.291	ENSNLEG00000014098	ZFR	100	59.770	Nomascus_leucogenys
ENSONIG00000013960	zfr	75	68.019	ENSMEUG00000010225	ZFR	80	69.355	Notamacropus_eugenii
ENSONIG00000013960	zfr	56	76.744	ENSOPRG00000016756	ZFR	84	73.333	Ochotona_princeps
ENSONIG00000013960	zfr	100	60.350	ENSOCUG00000016737	ZFR	100	60.810	Oryctolagus_cuniculus
ENSONIG00000013960	zfr	73	84.241	ENSORLG00000017243	zfr	82	78.444	Oryzias_latipes
ENSONIG00000013960	zfr	73	84.241	ENSORLG00020014823	zfr	80	78.444	Oryzias_latipes_hni
ENSONIG00000013960	zfr	78	82.734	ENSORLG00015005801	zfr	80	78.222	Oryzias_latipes_hsok
ENSONIG00000013960	zfr	73	84.814	ENSOMEG00000003336	zfr	80	80.000	Oryzias_melastigma
ENSONIG00000013960	zfr	100	59.926	ENSOGAG00000015117	ZFR	100	60.294	Otolemur_garnettii
ENSONIG00000013960	zfr	97	58.991	ENSPPAG00000027447	ZFR	99	59.732	Pan_paniscus
ENSONIG00000013960	zfr	100	60.350	ENSPTRG00000016771	ZFR	100	60.902	Pan_troglodytes
ENSONIG00000013960	zfr	100	59.019	ENSPANG00000003729	ZFR	100	59.482	Papio_anubis
ENSONIG00000013960	zfr	74	72.792	ENSPKIG00000007596	ZFR	79	70.133	Paramormyrops_kingsleyae
ENSONIG00000013960	zfr	79	82.775	ENSPKIG00000016781	ZFR	100	64.604	Paramormyrops_kingsleyae
ENSONIG00000013960	zfr	74	80.636	ENSPMGG00000015984	zfr	86	73.529	Periophthalmus_magnuspinnatus
ENSONIG00000013960	zfr	79	74.940	ENSPCIG00000020906	ZFR	100	60.711	Phascolarctos_cinereus
ENSONIG00000013960	zfr	74	83.848	ENSPFOG00000005931	zfr	100	65.146	Poecilia_formosa
ENSONIG00000013960	zfr	78	84.173	ENSPREG00000011947	zfr	100	65.356	Poecilia_reticulata
ENSONIG00000013960	zfr	81	66.892	ENSPCAG00000007277	ZFR	83	68.243	Procavia_capensis
ENSONIG00000013960	zfr	95	58.818	ENSPCOG00000000045	ZFR	99	59.205	Propithecus_coquereli
ENSONIG00000013960	zfr	93	67.647	ENSPVAG00000004780	ZFR	94	67.647	Pteropus_vampyrus
ENSONIG00000013960	zfr	59	99.448	ENSPNYG00000006239	zfr	100	62.546	Pundamilia_nyererei
ENSONIG00000013960	zfr	79	84.689	ENSPNAG00000025151	zfr	80	80.488	Pygocentrus_nattereri
ENSONIG00000013960	zfr	100	60.367	ENSRNOG00000011627	Zfr	87	74.107	Rattus_norvegicus
ENSONIG00000013960	zfr	100	60.166	ENSRBIG00000041561	ZFR	100	60.718	Rhinopithecus_bieti
ENSONIG00000013960	zfr	100	60.166	ENSRROG00000044008	ZFR	100	60.718	Rhinopithecus_roxellana
ENSONIG00000013960	zfr	96	59.462	ENSSBOG00000024150	ZFR	99	59.942	Saimiri_boliviensis_boliviensis
ENSONIG00000013960	zfr	75	75.179	ENSSHAG00000015478	ZFR	100	59.829	Sarcophilus_harrisii
ENSONIG00000013960	zfr	79	81.340	ENSSFOG00015017300	ZFR	100	59.794	Scleropages_formosus
ENSONIG00000013960	zfr	74	83.886	ENSSMAG00000000320	zfr	83	80.440	Scophthalmus_maximus
ENSONIG00000013960	zfr	74	87.560	ENSSDUG00000013882	zfr	80	83.149	Seriola_dumerili
ENSONIG00000013960	zfr	72	87.799	ENSSLDG00000000762	zfr	78	83.370	Seriola_lalandi_dorsalis
ENSONIG00000013960	zfr	74	88.517	ENSSPAG00000019293	zfr	80	84.035	Stegastes_partitus
ENSONIG00000013960	zfr	59	84.127	ENSSSCG00000027681	ZFR	100	60.440	Sus_scrofa
ENSONIG00000013960	zfr	74	84.571	ENSTRUG00000016620	zfr	100	65.685	Takifugu_rubripes
ENSONIG00000013960	zfr	75	81.538	ENSTBEG00000017687	ZFR	83	55.752	Tupaia_belangeri
ENSONIG00000013960	zfr	81	73.747	ENSTTRG00000017321	ZFR	83	71.018	Tursiops_truncatus
ENSONIG00000013960	zfr	77	52.397	ENSUAMG00000000172	-	99	56.066	Ursus_americanus
ENSONIG00000013960	zfr	77	52.397	ENSUMAG00000013805	-	99	56.066	Ursus_maritimus
ENSONIG00000013960	zfr	72	85.669	ENSXETG00000015598	zfr	74	85.669	Xenopus_tropicalis
ENSONIG00000013960	zfr	78	83.933	ENSXCOG00000009361	zfr	100	64.051	Xiphophorus_couchianus
ENSONIG00000013960	zfr	78	84.173	ENSXMAG00000013356	zfr	100	64.142	Xiphophorus_maculatus