EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSONIG00000014119 (Gene tree)
Gene ID: 100701818
Gene Symbol: grsf1
Alias: -
Full Name: G-rich RNA sequence binding factor 1
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Plus strand
Length: 9238 bases
Position: chrGL831164.1:3849389-3858626
Accession: 100701818
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000017751	RRM_1	PF00076.22	6.4e-30	1	2
ENSONIP00000017751	RRM_1	PF00076.22	6.4e-30	2	2
ENSONIP00000017750	RRM_1	PF00076.22	1.2e-29	1	2
ENSONIP00000017750	RRM_1	PF00076.22	1.2e-29	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000017766	-	1062	-	ENSONIP00000017751	354 (aa)	-	I3K9F6
ENSONIT00000017765	-	1513	-	ENSONIP00000017750	400 (aa)	XP_003444523	I3K9F5

Gene Model

Click here to download ENSONIG00000014119's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000014119's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSONIG00000014119	grsf1	99	42.571	ENSONIG00000017754	hnrnph1	83	44.681
ENSONIG00000014119	grsf1	98	40.164	ENSONIG00000017042	hnrnph3	91	46.842

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000014119	grsf1	100	72.099	ENSAPOG00000012487	grsf1	100	72.099	Acanthochromis_polyacanthus
ENSONIG00000014119	grsf1	100	82.500	ENSACIG00000005871	grsf1	100	82.500	Amphilophus_citrinellus
ENSONIG00000014119	grsf1	100	74.010	ENSAOCG00000017462	-	100	74.010	Amphiprion_ocellaris
ENSONIG00000014119	grsf1	100	74.384	ENSAPEG00000007240	-	100	74.384	Amphiprion_percula
ENSONIG00000014119	grsf1	99	68.828	ENSATEG00000007185	grsf1	99	68.828	Anabas_testudineus
ENSONIG00000014119	grsf1	100	94.000	ENSACLG00000003685	-	100	94.000	Astatotilapia_calliptera
ENSONIG00000014119	grsf1	100	46.328	ENSAMXG00000012270	grsf1	98	52.160	Astyanax_mexicanus
ENSONIG00000014119	grsf1	99	62.840	ENSCSEG00000019209	-	99	62.840	Cynoglossus_semilaevis
ENSONIG00000014119	grsf1	89	75.000	ENSCVAG00000004476	grsf1	100	64.677	Cyprinodon_variegatus
ENSONIG00000014119	grsf1	99	47.009	ENSDARG00000053021	grsf1	77	53.191	Danio_rerio
ENSONIG00000014119	grsf1	99	50.122	ENSFHEG00000013358	-	99	50.608	Fundulus_heteroclitus
ENSONIG00000014119	grsf1	75	67.914	ENSGMOG00000014047	grsf1	99	54.605	Gadus_morhua
ENSONIG00000014119	grsf1	99	62.716	ENSGAFG00000004496	grsf1	99	62.716	Gambusia_affinis
ENSONIG00000014119	grsf1	98	60.227	ENSGACG00000014447	grsf1	97	64.596	Gasterosteus_aculeatus
ENSONIG00000014119	grsf1	100	94.500	ENSHBUG00000006284	grsf1	99	94.500	Haplochromis_burtoni
ENSONIG00000014119	grsf1	99	60.750	ENSHCOG00000007715	-	99	60.750	Hippocampus_comes
ENSONIG00000014119	grsf1	99	64.398	ENSIPUG00000010533	grsf1	76	64.398	Ictalurus_punctatus
ENSONIG00000014119	grsf1	99	61.412	ENSKMAG00000004528	grsf1	100	61.882	Kryptolebias_marmoratus
ENSONIG00000014119	grsf1	98	52.326	ENSLBEG00000018100	grsf1	98	57.460	Labrus_bergylta
ENSONIG00000014119	grsf1	99	69.576	ENSMAMG00000002627	grsf1	99	69.576	Mastacembelus_armatus
ENSONIG00000014119	grsf1	100	94.250	ENSMZEG00005020633	-	100	94.250	Maylandia_zebra
ENSONIG00000014119	grsf1	100	64.972	ENSMMOG00000014231	grsf1	99	65.306	Mola_mola
ENSONIG00000014119	grsf1	100	66.908	ENSMALG00000000251	grsf1	100	66.908	Monopterus_albus
ENSONIG00000014119	grsf1	98	94.911	ENSNBRG00000017774	grsf1	96	94.911	Neolamprologus_brichardi
ENSONIG00000014119	grsf1	99	63.198	ENSORLG00000030211	grsf1	99	63.198	Oryzias_latipes
ENSONIG00000014119	grsf1	99	61.404	ENSORLG00020014383	grsf1	99	62.437	Oryzias_latipes_hni
ENSONIG00000014119	grsf1	99	62.437	ENSORLG00015006520	grsf1	99	63.198	Oryzias_latipes_hsok
ENSONIG00000014119	grsf1	87	80.488	ENSOMEG00000009181	grsf1	99	65.482	Oryzias_melastigma
ENSONIG00000014119	grsf1	99	51.567	ENSPKIG00000019432	grsf1	77	57.846	Paramormyrops_kingsleyae
ENSONIG00000014119	grsf1	99	60.907	ENSPMGG00000013654	grsf1	92	65.672	Periophthalmus_magnuspinnatus
ENSONIG00000014119	grsf1	99	62.683	ENSPFOG00000006122	grsf1	99	62.864	Poecilia_formosa
ENSONIG00000014119	grsf1	99	62.990	ENSPLAG00000020977	grsf1	99	63.480	Poecilia_latipinna
ENSONIG00000014119	grsf1	99	63.415	ENSPMEG00000012485	grsf1	99	63.592	Poecilia_mexicana
ENSONIG00000014119	grsf1	99	62.774	ENSPREG00000013383	grsf1	99	63.260	Poecilia_reticulata
ENSONIG00000014119	grsf1	100	93.500	ENSPNYG00000005379	grsf1	100	93.500	Pundamilia_nyererei
ENSONIG00000014119	grsf1	100	65.464	ENSPNAG00000014912	grsf1	94	65.464	Pygocentrus_nattereri
ENSONIG00000014119	grsf1	99	43.429	ENSSFOG00015014620	grsf1	83	46.707	Scleropages_formosus
ENSONIG00000014119	grsf1	100	64.634	ENSSMAG00000014181	grsf1	88	64.634	Scophthalmus_maximus
ENSONIG00000014119	grsf1	99	74.752	ENSSDUG00000009397	-	100	70.393	Seriola_dumerili
ENSONIG00000014119	grsf1	97	77.059	ENSSLDG00000025494	grsf1	91	77.059	Seriola_lalandi_dorsalis
ENSONIG00000014119	grsf1	99	66.749	ENSSPAG00000023296	grsf1	99	66.749	Stegastes_partitus
ENSONIG00000014119	grsf1	96	62.016	ENSTRUG00000015354	grsf1	99	61.905	Takifugu_rubripes
ENSONIG00000014119	grsf1	84	73.333	ENSTNIG00000015350	-	97	65.158	Tetraodon_nigroviridis
ENSONIG00000014119	grsf1	99	63.210	ENSXMAG00000029710	grsf1	99	63.210	Xiphophorus_maculatus