EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSONIG00000014401 (Gene tree)
Gene ID: -
Gene Symbol: shrprbck1r
Alias: -
Full Name: ranBP-type and C3HC4-type zinc finger-containing protein 1
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Plus strand
Length: 12857 bases
Position: chrGL831157.1:3070927-3083783
Accession: 100708611
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000018105	zf-RanBP	PF00641.18	3.6e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000018120	-	3984	XM_013270372	ENSONIP00000018105	708 (aa)	XP_013125826	I3KAG0

Gene Model

Click here to download ENSONIG00000014401's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000014401's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSONIG00000014401	shrprbck1r	55	56.020	ENSONIG00000009626	-	97	55.528
ENSONIG00000014401	shrprbck1r	76	45.120	ENSONIG00000006803	rbck1	100	45.102

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000014401	shrprbck1r	59	58.333	ENSAPOG00000023352	sharpin	95	57.639	Acanthochromis_polyacanthus
ENSONIG00000014401	shrprbck1r	100	83.776	ENSAPOG00000022737	shrprbck1r	100	83.357	Acanthochromis_polyacanthus
ENSONIG00000014401	shrprbck1r	100	91.667	ENSACIG00000002184	shrprbck1r	100	91.667	Amphilophus_citrinellus
ENSONIG00000014401	shrprbck1r	100	85.714	ENSAOCG00000002890	shrprbck1r	100	85.434	Amphiprion_ocellaris
ENSONIG00000014401	shrprbck1r	59	58.333	ENSAOCG00000017464	sharpin	95	57.639	Amphiprion_ocellaris
ENSONIG00000014401	shrprbck1r	100	83.520	ENSAPEG00000023274	shrprbck1r	100	83.240	Amphiprion_percula
ENSONIG00000014401	shrprbck1r	59	58.565	ENSAPEG00000004049	sharpin	95	57.870	Amphiprion_percula
ENSONIG00000014401	shrprbck1r	100	82.278	ENSATEG00000014561	shrprbck1r	100	82.278	Anabas_testudineus
ENSONIG00000014401	shrprbck1r	60	58.275	ENSATEG00000007832	sharpin	88	57.576	Anabas_testudineus
ENSONIG00000014401	shrprbck1r	100	97.609	ENSACLG00000022609	shrprbck1r	100	97.609	Astatotilapia_calliptera
ENSONIG00000014401	shrprbck1r	100	70.380	ENSAMXG00000021016	shrprbck1r	100	70.862	Astyanax_mexicanus
ENSONIG00000014401	shrprbck1r	54	57.881	ENSAMXG00000006229	sharpin	97	57.881	Astyanax_mexicanus
ENSONIG00000014401	shrprbck1r	100	75.882	ENSCSEG00000011306	shrprbck1r	100	75.882	Cynoglossus_semilaevis
ENSONIG00000014401	shrprbck1r	59	55.684	ENSCVAG00000006586	sharpin	95	54.988	Cyprinodon_variegatus
ENSONIG00000014401	shrprbck1r	100	80.731	ENSCVAG00000007250	shrprbck1r	100	80.028	Cyprinodon_variegatus
ENSONIG00000014401	shrprbck1r	100	70.816	ENSDARG00000059871	shrprbck1r	100	71.231	Danio_rerio
ENSONIG00000014401	shrprbck1r	54	56.218	ENSDARG00000076995	sharpin	94	56.477	Danio_rerio
ENSONIG00000014401	shrprbck1r	100	75.209	ENSELUG00000016022	shrprbck1r	100	75.209	Esox_lucius
ENSONIG00000014401	shrprbck1r	59	56.381	ENSFHEG00000013564	sharpin	94	55.452	Fundulus_heteroclitus
ENSONIG00000014401	shrprbck1r	51	60.896	ENSGMOG00000010123	sharpin	91	60.896	Gadus_morhua
ENSONIG00000014401	shrprbck1r	59	44.104	ENSGAFG00000021405	sharpin	95	43.396	Gambusia_affinis
ENSONIG00000014401	shrprbck1r	100	79.520	ENSGAFG00000009309	shrprbck1r	100	78.814	Gambusia_affinis
ENSONIG00000014401	shrprbck1r	75	79.962	ENSGACG00000002544	shrprbck1r	100	79.962	Gasterosteus_aculeatus
ENSONIG00000014401	shrprbck1r	100	97.609	ENSHBUG00000021933	shrprbck1r	100	97.609	Haplochromis_burtoni
ENSONIG00000014401	shrprbck1r	62	52.370	ENSHCOG00000018847	sharpin	84	52.477	Hippocampus_comes
ENSONIG00000014401	shrprbck1r	51	72.973	ENSIPUG00000011951	sharpin	97	72.973	Ictalurus_punctatus
ENSONIG00000014401	shrprbck1r	96	68.975	ENSIPUG00000014247	shrprbck1r	98	66.621	Ictalurus_punctatus
ENSONIG00000014401	shrprbck1r	59	57.407	ENSKMAG00000015204	sharpin	76	56.944	Kryptolebias_marmoratus
ENSONIG00000014401	shrprbck1r	100	78.363	ENSKMAG00000015215	shrprbck1r	100	78.502	Kryptolebias_marmoratus
ENSONIG00000014401	shrprbck1r	60	58.352	ENSLBEG00000016624	sharpin	96	57.666	Labrus_bergylta
ENSONIG00000014401	shrprbck1r	100	84.107	ENSLBEG00000016876	shrprbck1r	100	84.107	Labrus_bergylta
ENSONIG00000014401	shrprbck1r	95	52.915	ENSLACG00000010948	-	98	52.374	Latimeria_chalumnae
ENSONIG00000014401	shrprbck1r	100	69.626	ENSLOCG00000008910	shrprbck1r	100	69.903	Lepisosteus_oculatus
ENSONIG00000014401	shrprbck1r	100	81.921	ENSMAMG00000022930	shrprbck1r	100	81.921	Mastacembelus_armatus
ENSONIG00000014401	shrprbck1r	58	55.556	ENSMAMG00000014645	sharpin	95	55.556	Mastacembelus_armatus
ENSONIG00000014401	shrprbck1r	100	97.468	ENSMZEG00005021257	shrprbck1r	100	97.468	Maylandia_zebra
ENSONIG00000014401	shrprbck1r	100	78.103	ENSMMOG00000003764	shrprbck1r	100	78.103	Mola_mola
ENSONIG00000014401	shrprbck1r	52	52.500	ENSMMOG00000016788	sharpin	91	52.500	Mola_mola
ENSONIG00000014401	shrprbck1r	54	55.556	ENSMALG00000020528	sharpin	96	55.556	Monopterus_albus
ENSONIG00000014401	shrprbck1r	95	82.769	ENSMALG00000008861	shrprbck1r	95	82.769	Monopterus_albus
ENSONIG00000014401	shrprbck1r	100	97.609	ENSNBRG00000002270	shrprbck1r	100	97.609	Neolamprologus_brichardi
ENSONIG00000014401	shrprbck1r	60	57.009	ENSORLG00000017281	sharpin	95	56.308	Oryzias_latipes
ENSONIG00000014401	shrprbck1r	100	79.044	ENSORLG00000007392	shrprbck1r	100	78.481	Oryzias_latipes
ENSONIG00000014401	shrprbck1r	60	56.542	ENSORLG00020000801	sharpin	95	55.841	Oryzias_latipes_hni
ENSONIG00000014401	shrprbck1r	100	78.481	ENSORLG00020018619	shrprbck1r	100	77.918	Oryzias_latipes_hni
ENSONIG00000014401	shrprbck1r	60	56.776	ENSORLG00015009860	sharpin	95	56.075	Oryzias_latipes_hsok
ENSONIG00000014401	shrprbck1r	100	78.481	ENSORLG00015018865	shrprbck1r	100	78.340	Oryzias_latipes_hsok
ENSONIG00000014401	shrprbck1r	100	80.309	ENSOMEG00000012749	shrprbck1r	100	79.747	Oryzias_melastigma
ENSONIG00000014401	shrprbck1r	59	44.181	ENSOMEG00000005729	sharpin	79	50.156	Oryzias_melastigma
ENSONIG00000014401	shrprbck1r	65	59.619	ENSPKIG00000018308	-	96	59.831	Paramormyrops_kingsleyae
ENSONIG00000014401	shrprbck1r	100	72.423	ENSPKIG00000006933	shrprbck1r	100	72.563	Paramormyrops_kingsleyae
ENSONIG00000014401	shrprbck1r	100	75.702	ENSPMGG00000013254	shrprbck1r	100	75.421	Periophthalmus_magnuspinnatus
ENSONIG00000014401	shrprbck1r	100	79.606	ENSPFOG00000004214	shrprbck1r	100	78.903	Poecilia_formosa
ENSONIG00000014401	shrprbck1r	59	56.250	ENSPFOG00000015253	sharpin	95	55.787	Poecilia_formosa
ENSONIG00000014401	shrprbck1r	59	56.481	ENSPLAG00000000423	sharpin	95	56.019	Poecilia_latipinna
ENSONIG00000014401	shrprbck1r	100	79.466	ENSPLAG00000020523	shrprbck1r	100	78.762	Poecilia_latipinna
ENSONIG00000014401	shrprbck1r	52	50.000	ENSPMEG00000023030	sharpin	89	50.000	Poecilia_mexicana
ENSONIG00000014401	shrprbck1r	100	78.059	ENSPMEG00000006877	shrprbck1r	100	77.356	Poecilia_mexicana
ENSONIG00000014401	shrprbck1r	100	77.075	ENSPREG00000014689	shrprbck1r	100	76.371	Poecilia_reticulata
ENSONIG00000014401	shrprbck1r	59	55.814	ENSPREG00000009702	sharpin	95	55.116	Poecilia_reticulata
ENSONIG00000014401	shrprbck1r	100	97.750	ENSPNYG00000022601	shrprbck1r	100	97.750	Pundamilia_nyererei
ENSONIG00000014401	shrprbck1r	55	56.443	ENSPNAG00000002911	sharpin	99	56.555	Pygocentrus_nattereri
ENSONIG00000014401	shrprbck1r	100	69.031	ENSPNAG00000007847	shrprbck1r	100	69.220	Pygocentrus_nattereri
ENSONIG00000014401	shrprbck1r	63	54.601	ENSSFOG00015004028	sharpin	99	55.422	Scleropages_formosus
ENSONIG00000014401	shrprbck1r	75	63.910	ENSSFOG00015014150	-	96	63.346	Scleropages_formosus
ENSONIG00000014401	shrprbck1r	100	80.307	ENSSMAG00000018085	shrprbck1r	100	80.307	Scophthalmus_maximus
ENSONIG00000014401	shrprbck1r	60	44.244	ENSSDUG00000019039	sharpin	96	43.341	Seriola_dumerili
ENSONIG00000014401	shrprbck1r	100	85.654	ENSSDUG00000002959	shrprbck1r	100	85.654	Seriola_dumerili
ENSONIG00000014401	shrprbck1r	100	84.951	ENSSLDG00000009026	shrprbck1r	100	84.951	Seriola_lalandi_dorsalis
ENSONIG00000014401	shrprbck1r	96	82.055	ENSSPAG00000016097	shrprbck1r	99	81.766	Stegastes_partitus
ENSONIG00000014401	shrprbck1r	100	79.213	ENSTRUG00000006949	shrprbck1r	100	79.213	Takifugu_rubripes
ENSONIG00000014401	shrprbck1r	59	53.521	ENSTRUG00000011046	sharpin	96	52.955	Takifugu_rubripes
ENSONIG00000014401	shrprbck1r	55	56.892	ENSTNIG00000008521	sharpin	94	56.391	Tetraodon_nigroviridis
ENSONIG00000014401	shrprbck1r	100	76.685	ENSXCOG00000006701	shrprbck1r	100	75.983	Xiphophorus_couchianus
ENSONIG00000014401	shrprbck1r	59	41.379	ENSXCOG00000015019	sharpin	96	56.250	Xiphophorus_couchianus
ENSONIG00000014401	shrprbck1r	100	76.545	ENSXMAG00000018972	shrprbck1r	100	75.843	Xiphophorus_maculatus
ENSONIG00000014401	shrprbck1r	59	55.684	ENSXMAG00000022076	sharpin	95	55.556	Xiphophorus_maculatus