EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSONIG00000014709 (Gene tree)
Gene ID: 109194164
Gene Symbol: -
Alias: -
Full Name: PR domain zinc finger protein 1
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Plus strand
Length: 8672 bases
Position: chrGL831422.1:430935-439606
Accession: 109194164
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000018516	zf-C2H2	PF00096.26	5e-15	1	3
ENSONIP00000018516	zf-C2H2	PF00096.26	5e-15	2	3
ENSONIP00000018516	zf-C2H2	PF00096.26	5e-15	3	3
ENSONIP00000018515	zf-C2H2	PF00096.26	6.6e-15	1	3
ENSONIP00000018515	zf-C2H2	PF00096.26	6.6e-15	2	3
ENSONIP00000018515	zf-C2H2	PF00096.26	6.6e-15	3	3
ENSONIP00000018516	zf-met	PF12874.7	4.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000018533	-	2241	-	ENSONIP00000018516	746 (aa)	-	I3KBM1
ENSONIT00000018532	-	2850	XM_005463226	ENSONIP00000018515	784 (aa)	XP_005463283	I3KBM0

Gene Model

Click here to download ENSONIG00000014709's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000014709's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSONIG00000014709	-	72	59.509	ENSONIG00000013583	prdm1b	69	59.509

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000014709	-	100	77.962	ENSAPOG00000014135	-	100	77.962	Acanthochromis_polyacanthus
ENSONIG00000014709	-	100	87.134	ENSACIG00000009747	-	100	87.134	Amphilophus_citrinellus
ENSONIG00000014709	-	57	58.282	ENSAPEG00000019826	prdm1b	54	58.282	Amphiprion_percula
ENSONIG00000014709	-	98	71.669	ENSATEG00000014034	-	99	71.669	Anabas_testudineus
ENSONIG00000014709	-	94	44.204	ENSATEG00000021017	prdm1a	98	45.000	Anabas_testudineus
ENSONIG00000014709	-	76	36.693	ENSATEG00000006924	prdm1b	85	37.604	Anabas_testudineus
ENSONIG00000014709	-	99	44.025	ENSCSEG00000009707	prdm1a	99	45.096	Cynoglossus_semilaevis
ENSONIG00000014709	-	59	55.215	ENSCVAG00000016746	prdm1b	56	55.967	Cyprinodon_variegatus
ENSONIG00000014709	-	98	44.219	ENSCVAG00000019081	prdm1a	98	43.813	Cyprinodon_variegatus
ENSONIG00000014709	-	99	67.261	ENSGAFG00000013012	-	99	67.261	Gambusia_affinis
ENSONIG00000014709	-	58	56.410	ENSGAFG00000016191	prdm1b	53	61.650	Gambusia_affinis
ENSONIG00000014709	-	53	55.967	ENSGACG00000002716	prdm1b	52	60.930	Gasterosteus_aculeatus
ENSONIG00000014709	-	52	63.000	ENSIPUG00000013740	prdm1b	53	61.429	Ictalurus_punctatus
ENSONIG00000014709	-	99	70.229	ENSKMAG00000016247	-	99	70.229	Kryptolebias_marmoratus
ENSONIG00000014709	-	98	42.145	ENSKMAG00000017597	prdm1a	98	42.734	Kryptolebias_marmoratus
ENSONIG00000014709	-	52	58.025	ENSLBEG00000020955	prdm1b	50	60.386	Labrus_bergylta
ENSONIG00000014709	-	68	49.524	ENSLOCG00000004978	prdm1b	70	49.524	Lepisosteus_oculatus
ENSONIG00000014709	-	98	72.374	ENSMALG00000000462	-	99	72.374	Monopterus_albus
ENSONIG00000014709	-	56	60.849	ENSPFOG00000003103	prdm1b	61	61.650	Poecilia_formosa
ENSONIG00000014709	-	99	42.188	ENSPVAG00000011732	PRDM1	75	53.824	Pteropus_vampyrus
ENSONIG00000014709	-	100	44.900	ENSPNAG00000028442	prdm1a	100	44.431	Pygocentrus_nattereri
ENSONIG00000014709	-	50	61.682	ENSSFOG00015021896	prdm1b	63	54.491	Scleropages_formosus
ENSONIG00000014709	-	57	56.442	ENSSMAG00000020467	prdm1b	55	56.442	Scophthalmus_maximus
ENSONIG00000014709	-	100	71.356	ENSSMAG00000017518	-	100	71.356	Scophthalmus_maximus
ENSONIG00000014709	-	100	76.835	ENSSDUG00000000524	-	100	76.835	Seriola_dumerili
ENSONIG00000014709	-	100	76.962	ENSSLDG00000001957	-	100	76.962	Seriola_lalandi_dorsalis
ENSONIG00000014709	-	55	57.669	ENSSLDG00000021973	prdm1b	54	57.669	Seriola_lalandi_dorsalis
ENSONIG00000014709	-	100	77.411	ENSSPAG00000009830	-	100	77.411	Stegastes_partitus
ENSONIG00000014709	-	83	43.328	ENSTNIG00000003926	prdm1a	86	45.969	Tetraodon_nigroviridis
ENSONIG00000014709	-	59	55.215	ENSXCOG00000018920	prdm1b	52	61.165	Xiphophorus_couchianus