EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSONIG00000014924 (Gene tree)
Gene ID: -
Gene Symbol: rbm28
Alias: -
Full Name: RNA binding motif protein 28
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Plus strand
Length: 11018 bases
Position: chrGL831142.1:4303629-4314646
Accession: ZDB-GENE-040426-960
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000018789	RRM_1	PF00076.22	4.5e-60	1	3
ENSONIP00000018789	RRM_1	PF00076.22	4.5e-60	2	3
ENSONIP00000018789	RRM_1	PF00076.22	4.5e-60	3	3
ENSONIP00000018788	RRM_1	PF00076.22	4.9e-60	1	3
ENSONIP00000018788	RRM_1	PF00076.22	4.9e-60	2	3
ENSONIP00000018788	RRM_1	PF00076.22	4.9e-60	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000018806	-	2283	-	ENSONIP00000018789	761 (aa)	-	I3KCE4
ENSONIT00000018805	-	4626	-	ENSONIP00000018788	773 (aa)	-	I3KCE3

Gene Model

Click here to download ENSONIG00000014924's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000014924's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSONIG00000014924	rbm28	58	30.055	ENSONIG00000006871	-	56	30.220

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000014924	rbm28	100	50.000	ENSG00000106344	RBM28	100	49.510	Homo_sapiens
ENSONIG00000014924	rbm28	57	76.298	ENSAPOG00000015512	rbm28	100	71.300	Acanthochromis_polyacanthus
ENSONIG00000014924	rbm28	97	58.621	ENSAMEG00000004776	RBM28	64	60.256	Ailuropoda_melanoleuca
ENSONIG00000014924	rbm28	56	85.882	ENSACIG00000023153	rbm28	91	85.412	Amphilophus_citrinellus
ENSONIG00000014924	rbm28	57	76.749	ENSAOCG00000000462	rbm28	100	72.879	Amphiprion_ocellaris
ENSONIG00000014924	rbm28	57	76.524	ENSAPEG00000012996	rbm28	100	73.393	Amphiprion_percula
ENSONIG00000014924	rbm28	59	70.270	ENSATEG00000001672	rbm28	100	65.629	Anabas_testudineus
ENSONIG00000014924	rbm28	100	50.000	ENSANAG00000033922	RBM28	80	53.982	Aotus_nancymaae
ENSONIG00000014924	rbm28	100	95.213	ENSACLG00000025024	rbm28	100	95.213	Astatotilapia_calliptera
ENSONIG00000014924	rbm28	58	61.573	ENSAMXG00000000763	rbm28	99	60.360	Astyanax_mexicanus
ENSONIG00000014924	rbm28	63	64.103	ENSBTAG00000017001	RBM28	81	53.611	Bos_taurus
ENSONIG00000014924	rbm28	100	50.254	ENSCJAG00000017731	RBM28	82	54.204	Callithrix_jacchus
ENSONIG00000014924	rbm28	100	50.000	ENSCAFG00000001667	RBM28	58	54.646	Canis_familiaris
ENSONIG00000014924	rbm28	100	50.000	ENSCAFG00020021648	RBM28	58	54.646	Canis_lupus_dingo
ENSONIG00000014924	rbm28	62	54.545	ENSCHIG00000014146	RBM28	59	53.796	Capra_hircus
ENSONIG00000014924	rbm28	68	66.667	ENSTSYG00000002892	RBM28	78	66.667	Carlito_syrichta
ENSONIG00000014924	rbm28	100	50.064	ENSCPOG00000006253	RBM28	58	54.444	Cavia_porcellus
ENSONIG00000014924	rbm28	68	64.103	ENSCCAG00000035105	RBM28	79	53.982	Cebus_capucinus
ENSONIG00000014924	rbm28	100	51.086	ENSCATG00000040497	RBM28	79	54.084	Cercocebus_atys
ENSONIG00000014924	rbm28	100	47.282	ENSCLAG00000003707	RBM28	61	54.367	Chinchilla_lanigera
ENSONIG00000014924	rbm28	100	49.365	ENSCSAG00000010161	RBM28	58	52.667	Chlorocebus_sabaeus
ENSONIG00000014924	rbm28	56	58.065	ENSCHOG00000001994	-	63	54.839	Choloepus_hoffmanni
ENSONIG00000014924	rbm28	52	50.446	ENSCPBG00000018088	RBM28	78	51.196	Chrysemys_picta_bellii
ENSONIG00000014924	rbm28	94	41.667	ENSCING00000009238	-	53	41.688	Ciona_intestinalis
ENSONIG00000014924	rbm28	96	52.768	ENSCANG00000038397	RBM28	93	52.632	Colobus_angolensis_palliatus
ENSONIG00000014924	rbm28	64	54.545	ENSCGRG00001021278	Rbm28	56	55.580	Cricetulus_griseus_chok1gshd
ENSONIG00000014924	rbm28	100	50.704	ENSCGRG00000005098	Rbm28	58	55.580	Cricetulus_griseus_crigri
ENSONIG00000014924	rbm28	100	64.450	ENSCSEG00000004212	rbm28	60	72.687	Cynoglossus_semilaevis
ENSONIG00000014924	rbm28	59	76.940	ENSCVAG00000010493	rbm28	58	76.821	Cyprinodon_variegatus
ENSONIG00000014924	rbm28	100	51.739	ENSDARG00000025332	rbm28	76	60.771	Danio_rerio
ENSONIG00000014924	rbm28	100	50.643	ENSDNOG00000001124	RBM28	58	53.863	Dasypus_novemcinctus
ENSONIG00000014924	rbm28	63	50.701	ENSDORG00000004184	Rbm28	86	53.982	Dipodomys_ordii
ENSONIG00000014924	rbm28	100	46.811	ENSETEG00000007130	RBM28	56	51.039	Echinops_telfairi
ENSONIG00000014924	rbm28	64	52.610	ENSEASG00005008528	RBM28	57	53.642	Equus_asinus_asinus
ENSONIG00000014924	rbm28	64	52.610	ENSECAG00000007745	RBM28	57	53.642	Equus_caballus
ENSONIG00000014924	rbm28	100	47.943	ENSEEUG00000002389	RBM28	58	50.223	Erinaceus_europaeus
ENSONIG00000014924	rbm28	100	58.794	ENSELUG00000020602	rbm28	59	64.147	Esox_lucius
ENSONIG00000014924	rbm28	100	50.585	ENSFCAG00000000946	RBM28	81	53.863	Felis_catus
ENSONIG00000014924	rbm28	100	49.290	ENSFDAG00000010169	RBM28	59	54.267	Fukomys_damarensis
ENSONIG00000014924	rbm28	99	55.204	ENSGMOG00000007091	rbm28	91	59.867	Gadus_morhua
ENSONIG00000014924	rbm28	59	74.066	ENSGAFG00000004802	rbm28	98	73.626	Gambusia_affinis
ENSONIG00000014924	rbm28	58	75.281	ENSGACG00000012612	rbm28	100	67.273	Gasterosteus_aculeatus
ENSONIG00000014924	rbm28	75	63.636	ENSGAGG00000008873	RBM28	83	62.632	Gopherus_agassizii
ENSONIG00000014924	rbm28	94	48.996	ENSGGOG00000004644	RBM28	59	52.954	Gorilla_gorilla
ENSONIG00000014924	rbm28	95	95.362	ENSHBUG00000009611	rbm28	99	95.362	Haplochromis_burtoni
ENSONIG00000014924	rbm28	100	50.000	ENSHGLG00000005409	RBM28	86	59.406	Heterocephalus_glaber_female
ENSONIG00000014924	rbm28	100	50.000	ENSHGLG00100016458	RBM28	86	59.406	Heterocephalus_glaber_male
ENSONIG00000014924	rbm28	99	49.025	ENSHCOG00000010597	rbm28	97	54.525	Hippocampus_comes
ENSONIG00000014924	rbm28	56	48.605	ENSIPUG00000007103	rbm28	81	48.140	Ictalurus_punctatus
ENSONIG00000014924	rbm28	100	49.007	ENSSTOG00000002169	RBM28	57	54.066	Ictidomys_tridecemlineatus
ENSONIG00000014924	rbm28	100	47.182	ENSJJAG00000022400	Rbm28	85	57.459	Jaculus_jaculus
ENSONIG00000014924	rbm28	99	66.796	ENSKMAG00000013348	rbm28	99	66.115	Kryptolebias_marmoratus
ENSONIG00000014924	rbm28	59	73.348	ENSLBEG00000012998	rbm28	100	66.963	Labrus_bergylta
ENSONIG00000014924	rbm28	100	58.673	ENSLOCG00000015541	rbm28	100	59.278	Lepisosteus_oculatus
ENSONIG00000014924	rbm28	100	50.960	ENSLAFG00000010717	RBM28	58	53.422	Loxodonta_africana
ENSONIG00000014924	rbm28	100	49.683	ENSMFAG00000031036	RBM28	79	52.851	Macaca_fascicularis
ENSONIG00000014924	rbm28	100	49.430	ENSMMUG00000007250	RBM28	79	52.851	Macaca_mulatta
ENSONIG00000014924	rbm28	100	49.936	ENSMNEG00000036970	RBM28	78	52.851	Macaca_nemestrina
ENSONIG00000014924	rbm28	100	69.103	ENSMAMG00000008525	rbm28	59	73.866	Mastacembelus_armatus
ENSONIG00000014924	rbm28	93	94.861	ENSMZEG00005019625	rbm28	100	94.861	Maylandia_zebra
ENSONIG00000014924	rbm28	64	54.158	ENSMAUG00000002263	Rbm28	56	55.928	Mesocricetus_auratus
ENSONIG00000014924	rbm28	64	51.081	ENSMICG00000000107	RBM28	60	54.746	Microcebus_murinus
ENSONIG00000014924	rbm28	100	50.579	ENSMOCG00000014615	Rbm28	59	54.767	Microtus_ochrogaster
ENSONIG00000014924	rbm28	58	66.219	ENSMMOG00000008600	rbm28	91	64.877	Mola_mola
ENSONIG00000014924	rbm28	100	47.264	ENSMODG00000015151	RBM28	58	53.159	Monodelphis_domestica
ENSONIG00000014924	rbm28	59	76.211	ENSMALG00000006419	rbm28	58	75.551	Monopterus_albus
ENSONIG00000014924	rbm28	62	54.219	MGP_CAROLIEiJ_G0028162	Rbm28	59	54.248	Mus_caroli
ENSONIG00000014924	rbm28	100	50.581	ENSMUSG00000029701	Rbm28	58	55.631	Mus_musculus
ENSONIG00000014924	rbm28	100	50.963	MGP_PahariEiJ_G0021920	Rbm28	58	54.545	Mus_pahari
ENSONIG00000014924	rbm28	100	50.579	MGP_SPRETEiJ_G0029162	Rbm28	58	55.605	Mus_spretus
ENSONIG00000014924	rbm28	100	51.282	ENSMPUG00000006511	RBM28	58	55.507	Mustela_putorius_furo
ENSONIG00000014924	rbm28	64	52.410	ENSMLUG00000002186	RBM28	58	53.422	Myotis_lucifugus
ENSONIG00000014924	rbm28	100	50.000	ENSNGAG00000006480	-	59	54.705	Nannospalax_galili
ENSONIG00000014924	rbm28	100	49.805	ENSNGAG00000017946	-	58	53.229	Nannospalax_galili
ENSONIG00000014924	rbm28	69	64.103	ENSNLEG00000012307	RBM28	76	64.103	Nomascus_leucogenys
ENSONIG00000014924	rbm28	80	60.377	ENSMEUG00000009611	RBM28	83	60.377	Notamacropus_eugenii
ENSONIG00000014924	rbm28	100	47.233	ENSODEG00000003213	-	57	50.993	Octodon_degus
ENSONIG00000014924	rbm28	73	58.038	ENSODEG00000013217	-	79	58.038	Octodon_degus
ENSONIG00000014924	rbm28	100	48.412	ENSOANG00000000815	-	59	50.327	Ornithorhynchus_anatinus
ENSONIG00000014924	rbm28	63	54.004	ENSOCUG00000003009	RBM28	57	54.212	Oryctolagus_cuniculus
ENSONIG00000014924	rbm28	99	67.183	ENSORLG00000009636	rbm28	99	66.194	Oryzias_latipes
ENSONIG00000014924	rbm28	59	74.610	ENSORLG00020002123	rbm28	99	62.800	Oryzias_latipes_hni
ENSONIG00000014924	rbm28	87	71.778	ENSORLG00015015030	rbm28	98	71.707	Oryzias_latipes_hsok
ENSONIG00000014924	rbm28	59	75.604	ENSOMEG00000007801	rbm28	100	67.358	Oryzias_melastigma
ENSONIG00000014924	rbm28	84	50.877	ENSOGAG00000006011	RBM28	78	53.778	Otolemur_garnettii
ENSONIG00000014924	rbm28	100	50.824	ENSOARG00000002547	RBM28	59	53.796	Ovis_aries
ENSONIG00000014924	rbm28	71	52.632	ENSPPAG00000041730	RBM28	79	52.954	Pan_paniscus
ENSONIG00000014924	rbm28	100	49.806	ENSPPRG00000004420	RBM28	81	53.744	Panthera_pardus
ENSONIG00000014924	rbm28	100	50.585	ENSPTIG00000008550	RBM28	81	53.863	Panthera_tigris_altaica
ENSONIG00000014924	rbm28	71	52.632	ENSPTRG00000019659	RBM28	79	52.954	Pan_troglodytes
ENSONIG00000014924	rbm28	100	48.731	ENSPANG00000022295	RBM28	79	52.851	Papio_anubis
ENSONIG00000014924	rbm28	99	54.110	ENSPKIG00000023453	rbm28	62	54.959	Paramormyrops_kingsleyae
ENSONIG00000014924	rbm28	92	66.513	ENSPMGG00000012840	rbm28	90	69.951	Periophthalmus_magnuspinnatus
ENSONIG00000014924	rbm28	100	49.610	ENSPEMG00000020673	Rbm28	85	59.444	Peromyscus_maniculatus_bairdii
ENSONIG00000014924	rbm28	100	49.541	ENSPCIG00000012810	RBM28	59	53.437	Phascolarctos_cinereus
ENSONIG00000014924	rbm28	59	73.392	ENSPFOG00000018209	rbm28	59	73.510	Poecilia_formosa
ENSONIG00000014924	rbm28	58	73.884	ENSPLAG00000016078	rbm28	56	73.438	Poecilia_latipinna
ENSONIG00000014924	rbm28	59	73.230	ENSPMEG00000004292	rbm28	59	73.348	Poecilia_mexicana
ENSONIG00000014924	rbm28	58	72.627	ENSPREG00000014287	rbm28	75	72.185	Poecilia_reticulata
ENSONIG00000014924	rbm28	100	49.747	ENSPPYG00000017975	RBM28	58	53.111	Pongo_abelii
ENSONIG00000014924	rbm28	75	50.829	ENSPCAG00000008223	RBM28	83	50.549	Procavia_capensis
ENSONIG00000014924	rbm28	72	52.632	ENSPCOG00000016797	RBM28	78	54.586	Propithecus_coquereli
ENSONIG00000014924	rbm28	74	62.150	ENSPVAG00000005443	RBM28	70	64.677	Pteropus_vampyrus
ENSONIG00000014924	rbm28	100	95.213	ENSPNYG00000014003	rbm28	100	95.213	Pundamilia_nyererei
ENSONIG00000014924	rbm28	100	50.129	ENSRNOG00000005468	Rbm28	58	54.267	Rattus_norvegicus
ENSONIG00000014924	rbm28	100	49.430	ENSRBIG00000033990	RBM28	78	52.667	Rhinopithecus_bieti
ENSONIG00000014924	rbm28	100	49.430	ENSRROG00000040747	RBM28	79	52.667	Rhinopithecus_roxellana
ENSONIG00000014924	rbm28	86	46.939	ENSSBOG00000012308	RBM28	72	59.901	Saimiri_boliviensis_boliviensis
ENSONIG00000014924	rbm28	96	47.347	ENSSHAG00000017017	RBM28	97	47.724	Sarcophilus_harrisii
ENSONIG00000014924	rbm28	100	55.411	ENSSFOG00015001231	rbm28	60	60.948	Scleropages_formosus
ENSONIG00000014924	rbm28	68	63.793	ENSSMAG00000003885	rbm28	90	65.789	Scophthalmus_maximus
ENSONIG00000014924	rbm28	59	80.617	ENSSDUG00000014270	rbm28	88	80.396	Seriola_dumerili
ENSONIG00000014924	rbm28	100	71.026	ENSSLDG00000020099	rbm28	100	71.026	Seriola_lalandi_dorsalis
ENSONIG00000014924	rbm28	73	60.054	ENSSARG00000008303	RBM28	76	60.109	Sorex_araneus
ENSONIG00000014924	rbm28	67	60.294	ENSSPUG00000000838	RBM28	80	60.294	Sphenodon_punctatus
ENSONIG00000014924	rbm28	58	76.682	ENSSPAG00000023305	rbm28	100	70.548	Stegastes_partitus
ENSONIG00000014924	rbm28	100	51.279	ENSSSCG00000031847	RBM28	59	55.482	Sus_scrofa
ENSONIG00000014924	rbm28	100	63.198	ENSTRUG00000013311	rbm28	99	63.124	Takifugu_rubripes
ENSONIG00000014924	rbm28	99	60.453	ENSTNIG00000017962	rbm28	60	69.095	Tetraodon_nigroviridis
ENSONIG00000014924	rbm28	69	54.019	ENSTBEG00000012749	RBM28	67	54.313	Tupaia_belangeri
ENSONIG00000014924	rbm28	100	50.380	ENSTTRG00000013647	RBM28	85	61.386	Tursiops_truncatus
ENSONIG00000014924	rbm28	100	48.067	ENSUAMG00000006949	RBM28	83	57.075	Ursus_americanus
ENSONIG00000014924	rbm28	100	50.773	ENSUMAG00000005997	RBM28	58	53.642	Ursus_maritimus
ENSONIG00000014924	rbm28	86	47.605	ENSVPAG00000008304	RBM28	70	71.111	Vicugna_pacos
ENSONIG00000014924	rbm28	100	49.870	ENSVVUG00000007270	RBM28	58	54.646	Vulpes_vulpes
ENSONIG00000014924	rbm28	99	48.489	ENSXETG00000009271	rbm28	58	50.743	Xenopus_tropicalis
ENSONIG00000014924	rbm28	59	69.265	ENSXCOG00000020357	rbm28	92	68.820	Xiphophorus_couchianus
ENSONIG00000014924	rbm28	58	73.333	ENSXMAG00000004415	rbm28	59	73.051	Xiphophorus_maculatus