EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSONIG00000015059 (Gene tree)
Gene ID: 100696717
Gene Symbol: smarcad1a
Alias: -
Full Name: SWI/SNF-related%2C matrix-associated actin-dependent regulator of chromatin%2C subfamily a%2C containing DEAD/H box 1 a
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Plus strand
Length: 12001 bases
Position: chrGL831176.1:2308234-2320234
Accession: ZDB-GENE-050522-499
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000018956	ResIII	PF04851.15	5e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000018973	-	3250	-	ENSONIP00000018956	961 (aa)	-	I3KCW1

Gene Model

Click here to download ENSONIG00000015059's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000015059's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSONIG00000015059	smarcad1a	52	31.619	ENSONIG00000006067	rad54b	50	31.452
ENSONIG00000015059	smarcad1a	53	30.159	ENSONIG00000015139	ercc6l2	77	30.159
ENSONIG00000015059	smarcad1a	54	36.765	ENSONIG00000013166	hells	63	36.481

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000015059	smarcad1a	100	52.220	ENSG00000163104	SMARCAD1	100	66.611	Homo_sapiens
ENSONIG00000015059	smarcad1a	100	84.942	ENSAPOG00000011446	smarcad1a	87	88.924	Acanthochromis_polyacanthus
ENSONIG00000015059	smarcad1a	89	57.732	ENSAMEG00000005844	SMARCAD1	63	65.895	Ailuropoda_melanoleuca
ENSONIG00000015059	smarcad1a	77	87.946	ENSACIG00000018326	smarcad1a	100	92.910	Amphilophus_citrinellus
ENSONIG00000015059	smarcad1a	100	84.985	ENSAOCG00000019762	smarcad1a	87	89.548	Amphiprion_ocellaris
ENSONIG00000015059	smarcad1a	100	84.840	ENSAPEG00000003889	smarcad1a	87	89.392	Amphiprion_percula
ENSONIG00000015059	smarcad1a	94	85.417	ENSATEG00000015608	smarcad1a	81	90.177	Anabas_testudineus
ENSONIG00000015059	smarcad1a	89	58.581	ENSAPLG00000004630	SMARCAD1	90	58.039	Anas_platyrhynchos
ENSONIG00000015059	smarcad1a	100	51.056	ENSACAG00000013554	SMARCAD1	100	51.495	Anolis_carolinensis
ENSONIG00000015059	smarcad1a	100	52.413	ENSANAG00000020488	SMARCAD1	71	65.895	Aotus_nancymaae
ENSONIG00000015059	smarcad1a	100	91.557	ENSACLG00000017063	smarcad1a	95	96.100	Astatotilapia_calliptera
ENSONIG00000015059	smarcad1a	74	68.732	ENSAMXG00000015470	smarcad1a	90	72.713	Astyanax_mexicanus
ENSONIG00000015059	smarcad1a	83	64.415	ENSAMXG00000019130	smarcad1b	68	74.571	Astyanax_mexicanus
ENSONIG00000015059	smarcad1a	100	51.977	ENSBTAG00000017061	SMARCAD1	63	65.895	Bos_taurus
ENSONIG00000015059	smarcad1a	68	41.203	WBGene00010845	M03C11.8	69	40.000	Caenorhabditis_elegans
ENSONIG00000015059	smarcad1a	100	52.077	ENSCJAG00000006778	SMARCAD1	63	66.049	Callithrix_jacchus
ENSONIG00000015059	smarcad1a	100	52.174	ENSCAFG00000010026	SMARCAD1	63	66.049	Canis_familiaris
ENSONIG00000015059	smarcad1a	89	57.847	ENSCAFG00020003994	SMARCAD1	72	66.049	Canis_lupus_dingo
ENSONIG00000015059	smarcad1a	100	51.880	ENSCHIG00000012905	SMARCAD1	63	65.895	Capra_hircus
ENSONIG00000015059	smarcad1a	100	52.647	ENSTSYG00000002706	SMARCAD1	63	65.895	Carlito_syrichta
ENSONIG00000015059	smarcad1a	84	52.206	ENSCAPG00000016744	SMARCAD1	68	59.171	Cavia_aperea
ENSONIG00000015059	smarcad1a	100	52.601	ENSCPOG00000011398	SMARCAD1	63	66.049	Cavia_porcellus
ENSONIG00000015059	smarcad1a	100	52.413	ENSCCAG00000022264	SMARCAD1	100	66.611	Cebus_capucinus
ENSONIG00000015059	smarcad1a	100	52.317	ENSCATG00000035663	SMARCAD1	73	66.049	Cercocebus_atys
ENSONIG00000015059	smarcad1a	87	58.107	ENSCSAG00000004186	SMARCAD1	77	66.049	Chlorocebus_sabaeus
ENSONIG00000015059	smarcad1a	91	59.152	ENSCPBG00000013203	SMARCAD1	63	67.588	Chrysemys_picta_bellii
ENSONIG00000015059	smarcad1a	68	49.028	ENSCING00000001688	-	97	49.309	Ciona_intestinalis
ENSONIG00000015059	smarcad1a	100	52.317	ENSCANG00000003556	SMARCAD1	100	66.611	Colobus_angolensis_palliatus
ENSONIG00000015059	smarcad1a	100	51.541	ENSCGRG00001015056	Smarcad1	100	51.349	Cricetulus_griseus_chok1gshd
ENSONIG00000015059	smarcad1a	100	51.541	ENSCGRG00000014087	Smarcad1	100	51.349	Cricetulus_griseus_crigri
ENSONIG00000015059	smarcad1a	100	78.229	ENSCSEG00000014419	-	83	82.215	Cynoglossus_semilaevis
ENSONIG00000015059	smarcad1a	100	79.506	ENSCSEG00000017903	smarcad1a	84	83.463	Cynoglossus_semilaevis
ENSONIG00000015059	smarcad1a	68	74.504	ENSDARG00000073721	smarcad1b	67	75.351	Danio_rerio
ENSONIG00000015059	smarcad1a	100	59.543	ENSDARG00000014041	smarcad1a	65	75.430	Danio_rerio
ENSONIG00000015059	smarcad1a	100	52.027	ENSDNOG00000000806	-	63	66.049	Dasypus_novemcinctus
ENSONIG00000015059	smarcad1a	100	52.867	ENSDORG00000012331	Smarcad1	63	65.741	Dipodomys_ordii
ENSONIG00000015059	smarcad1a	67	45.552	FBgn0032157	Etl1	76	45.552	Drosophila_melanogaster
ENSONIG00000015059	smarcad1a	66	48.452	ENSEBUG00000003969	smarcad1a	91	50.000	Eptatretus_burgeri
ENSONIG00000015059	smarcad1a	100	52.073	ENSEASG00005012382	SMARCAD1	72	64.396	Equus_asinus_asinus
ENSONIG00000015059	smarcad1a	100	52.073	ENSECAG00000011562	SMARCAD1	63	65.895	Equus_caballus
ENSONIG00000015059	smarcad1a	100	65.116	ENSELUG00000018535	smarcad1a	87	81.747	Esox_lucius
ENSONIG00000015059	smarcad1a	83	62.940	ENSELUG00000019154	smarcad1b	79	64.442	Esox_lucius
ENSONIG00000015059	smarcad1a	100	51.688	ENSFCAG00000003958	SMARCAD1	100	66.611	Felis_catus
ENSONIG00000015059	smarcad1a	100	52.216	ENSFALG00000006089	SMARCAD1	100	51.977	Ficedula_albicollis
ENSONIG00000015059	smarcad1a	100	52.524	ENSFDAG00000017027	SMARCAD1	63	66.049	Fukomys_damarensis
ENSONIG00000015059	smarcad1a	99	81.166	ENSFHEG00000012778	smarcad1a	82	83.775	Fundulus_heteroclitus
ENSONIG00000015059	smarcad1a	90	73.648	ENSGMOG00000018995	smarcad1a	99	71.091	Gadus_morhua
ENSONIG00000015059	smarcad1a	83	58.549	ENSGALG00000037339	SMARCAD1	98	56.569	Gallus_gallus
ENSONIG00000015059	smarcad1a	100	63.808	ENSGAFG00000013498	smarcad1a	84	83.956	Gambusia_affinis
ENSONIG00000015059	smarcad1a	91	76.705	ENSGACG00000007327	smarcad1a	100	76.190	Gasterosteus_aculeatus
ENSONIG00000015059	smarcad1a	91	59.040	ENSGAGG00000008582	SMARCAD1	63	67.588	Gopherus_agassizii
ENSONIG00000015059	smarcad1a	100	52.220	ENSGGOG00000023001	SMARCAD1	63	66.049	Gorilla_gorilla
ENSONIG00000015059	smarcad1a	100	91.266	ENSHBUG00000011042	smarcad1a	90	95.788	Haplochromis_burtoni
ENSONIG00000015059	smarcad1a	100	52.418	ENSHGLG00000005070	SMARCAD1	63	66.049	Heterocephalus_glaber_female
ENSONIG00000015059	smarcad1a	100	52.418	ENSHGLG00100006812	SMARCAD1	63	66.049	Heterocephalus_glaber_male
ENSONIG00000015059	smarcad1a	99	80.187	ENSHCOG00000007848	smarcad1a	85	80.187	Hippocampus_comes
ENSONIG00000015059	smarcad1a	83	63.951	ENSIPUG00000022817	smarcad1b	69	73.167	Ictalurus_punctatus
ENSONIG00000015059	smarcad1a	92	73.006	ENSIPUG00000000242	smarcad1a	82	75.243	Ictalurus_punctatus
ENSONIG00000015059	smarcad1a	100	52.748	ENSSTOG00000001227	SMARCAD1	63	65.586	Ictidomys_tridecemlineatus
ENSONIG00000015059	smarcad1a	100	52.220	ENSJJAG00000022342	Smarcad1	63	65.741	Jaculus_jaculus
ENSONIG00000015059	smarcad1a	99	78.174	ENSKMAG00000021351	smarcad1a	85	84.395	Kryptolebias_marmoratus
ENSONIG00000015059	smarcad1a	97	81.924	ENSLBEG00000008088	smarcad1a	84	86.115	Labrus_bergylta
ENSONIG00000015059	smarcad1a	100	61.206	ENSLOCG00000012909	smarcad1a	100	60.545	Lepisosteus_oculatus
ENSONIG00000015059	smarcad1a	100	51.544	ENSLAFG00000000040	SMARCAD1	63	64.506	Loxodonta_africana
ENSONIG00000015059	smarcad1a	100	52.124	ENSMFAG00000042606	SMARCAD1	73	66.049	Macaca_fascicularis
ENSONIG00000015059	smarcad1a	89	57.847	ENSMMUG00000022242	SMARCAD1	73	66.049	Macaca_mulatta
ENSONIG00000015059	smarcad1a	100	52.124	ENSMNEG00000038117	SMARCAD1	100	66.611	Macaca_nemestrina
ENSONIG00000015059	smarcad1a	100	52.317	ENSMLEG00000038333	SMARCAD1	100	66.611	Mandrillus_leucophaeus
ENSONIG00000015059	smarcad1a	100	84.928	ENSMAMG00000000933	smarcad1a	85	89.392	Mastacembelus_armatus
ENSONIG00000015059	smarcad1a	100	91.412	ENSMZEG00005005203	smarcad1a	95	95.944	Maylandia_zebra
ENSONIG00000015059	smarcad1a	95	52.111	ENSMGAG00000005577	SMARCAD1	88	64.632	Meleagris_gallopavo
ENSONIG00000015059	smarcad1a	100	52.178	ENSMAUG00000008417	Smarcad1	100	51.445	Mesocricetus_auratus
ENSONIG00000015059	smarcad1a	100	52.157	ENSMICG00000009746	SMARCAD1	63	66.049	Microcebus_murinus
ENSONIG00000015059	smarcad1a	100	52.432	ENSMOCG00000017142	Smarcad1	100	52.237	Microtus_ochrogaster
ENSONIG00000015059	smarcad1a	76	83.929	ENSMMOG00000000275	smarcad1a	97	86.427	Mola_mola
ENSONIG00000015059	smarcad1a	89	58.998	ENSMODG00000019268	SMARCAD1	63	66.821	Monodelphis_domestica
ENSONIG00000015059	smarcad1a	87	58.637	MGP_CAROLIEiJ_G0028458	-	67	58.049	Mus_caroli
ENSONIG00000015059	smarcad1a	89	58.142	ENSMUSG00000029920	Smarcad1	100	52.284	Mus_musculus
ENSONIG00000015059	smarcad1a	100	52.478	MGP_PahariEiJ_G0022198	Smarcad1	100	52.128	Mus_pahari
ENSONIG00000015059	smarcad1a	89	58.142	MGP_SPRETEiJ_G0029462	Smarcad1	100	52.427	Mus_spretus
ENSONIG00000015059	smarcad1a	100	52.170	ENSMPUG00000002111	SMARCAD1	63	65.895	Mustela_putorius_furo
ENSONIG00000015059	smarcad1a	89	58.076	ENSMLUG00000000425	SMARCAD1	63	66.049	Myotis_lucifugus
ENSONIG00000015059	smarcad1a	100	52.348	ENSNGAG00000000810	Smarcad1	64	65.432	Nannospalax_galili
ENSONIG00000015059	smarcad1a	75	90.602	ENSNBRG00000012749	smarcad1a	85	95.728	Neolamprologus_brichardi
ENSONIG00000015059	smarcad1a	100	52.220	ENSNLEG00000014225	SMARCAD1	100	66.611	Nomascus_leucogenys
ENSONIG00000015059	smarcad1a	100	52.178	ENSODEG00000004334	SMARCAD1	63	66.049	Octodon_degus
ENSONIG00000015059	smarcad1a	83	60.343	ENSOANG00000013764	SMARCAD1	78	68.105	Ornithorhynchus_anatinus
ENSONIG00000015059	smarcad1a	100	52.077	ENSOCUG00000017283	SMARCAD1	63	65.741	Oryctolagus_cuniculus
ENSONIG00000015059	smarcad1a	100	83.384	ENSORLG00000004869	smarcad1a	84	84.555	Oryzias_latipes
ENSONIG00000015059	smarcad1a	100	83.384	ENSORLG00020020569	smarcad1a	84	84.555	Oryzias_latipes_hni
ENSONIG00000015059	smarcad1a	100	83.232	ENSORLG00015009045	smarcad1a	84	84.399	Oryzias_latipes_hsok
ENSONIG00000015059	smarcad1a	99	83.841	ENSOMEG00000023032	smarcad1a	84	85.179	Oryzias_melastigma
ENSONIG00000015059	smarcad1a	100	52.454	ENSOGAG00000011444	SMARCAD1	63	65.741	Otolemur_garnettii
ENSONIG00000015059	smarcad1a	100	51.977	ENSOARG00000017851	SMARCAD1	63	65.895	Ovis_aries
ENSONIG00000015059	smarcad1a	100	52.124	ENSPPAG00000035715	SMARCAD1	63	66.049	Pan_paniscus
ENSONIG00000015059	smarcad1a	100	51.880	ENSPPRG00000024756	SMARCAD1	100	66.611	Panthera_pardus
ENSONIG00000015059	smarcad1a	100	51.880	ENSPTIG00000017868	SMARCAD1	63	66.049	Panthera_tigris_altaica
ENSONIG00000015059	smarcad1a	100	52.220	ENSPTRG00000023126	SMARCAD1	100	66.611	Pan_troglodytes
ENSONIG00000015059	smarcad1a	100	51.442	ENSPANG00000019757	SMARCAD1	63	64.516	Papio_anubis
ENSONIG00000015059	smarcad1a	89	59.318	ENSPSIG00000010255	SMARCAD1	63	67.797	Pelodiscus_sinensis
ENSONIG00000015059	smarcad1a	67	78.416	ENSPMGG00000010735	smarcad1a	91	78.416	Periophthalmus_magnuspinnatus
ENSONIG00000015059	smarcad1a	100	47.705	ENSPEMG00000001854	Smarcad1	100	46.965	Peromyscus_maniculatus_bairdii
ENSONIG00000015059	smarcad1a	99	46.705	ENSPMAG00000003516	smarcad1a	64	58.589	Petromyzon_marinus
ENSONIG00000015059	smarcad1a	82	60.799	ENSPCIG00000008137	SMARCAD1	84	67.568	Phascolarctos_cinereus
ENSONIG00000015059	smarcad1a	100	83.409	ENSPFOG00000019116	smarcad1a	81	85.023	Poecilia_formosa
ENSONIG00000015059	smarcad1a	100	83.257	ENSPLAG00000000108	smarcad1a	81	84.867	Poecilia_latipinna
ENSONIG00000015059	smarcad1a	100	83.409	ENSPMEG00000009155	smarcad1a	81	85.023	Poecilia_mexicana
ENSONIG00000015059	smarcad1a	100	80.730	ENSPREG00000018185	smarcad1a	84	85.179	Poecilia_reticulata
ENSONIG00000015059	smarcad1a	100	51.981	ENSPPYG00000014935	SMARCAD1	63	65.741	Pongo_abelii
ENSONIG00000015059	smarcad1a	63	58.521	ENSPCOG00000020478	SMARCAD1	63	63.790	Propithecus_coquereli
ENSONIG00000015059	smarcad1a	89	57.274	ENSPVAG00000001760	SMARCAD1	63	64.660	Pteropus_vampyrus
ENSONIG00000015059	smarcad1a	75	89.721	ENSPNYG00000010087	smarcad1a	75	94.620	Pundamilia_nyererei
ENSONIG00000015059	smarcad1a	100	52.233	ENSRNOG00000006391	Smarcad1	100	51.942	Rattus_norvegicus
ENSONIG00000015059	smarcad1a	100	52.220	ENSRBIG00000041989	SMARCAD1	63	66.049	Rhinopithecus_bieti
ENSONIG00000015059	smarcad1a	100	52.220	ENSRROG00000035309	SMARCAD1	63	66.049	Rhinopithecus_roxellana
ENSONIG00000015059	smarcad1a	100	52.413	ENSSBOG00000032114	SMARCAD1	100	66.611	Saimiri_boliviensis_boliviensis
ENSONIG00000015059	smarcad1a	89	59.361	ENSSHAG00000001279	SMARCAD1	63	67.130	Sarcophilus_harrisii
ENSONIG00000015059	smarcad1a	100	59.357	ENSSFOG00015016814	smarcad1b	63	76.755	Scleropages_formosus
ENSONIG00000015059	smarcad1a	78	67.017	ENSSFOG00015020909	smarcad1a	85	74.534	Scleropages_formosus
ENSONIG00000015059	smarcad1a	100	83.721	ENSSMAG00000001326	smarcad1a	87	87.988	Scophthalmus_maximus
ENSONIG00000015059	smarcad1a	72	84.081	ENSSDUG00000022338	smarcad1a	76	88.924	Seriola_dumerili
ENSONIG00000015059	smarcad1a	100	83.382	ENSSLDG00000024986	smarcad1a	83	87.988	Seriola_lalandi_dorsalis
ENSONIG00000015059	smarcad1a	62	69.333	ENSSPUG00000004633	SMARCAD1	99	69.333	Sphenodon_punctatus
ENSONIG00000015059	smarcad1a	100	85.423	ENSSPAG00000001970	smarcad1a	83	89.548	Stegastes_partitus
ENSONIG00000015059	smarcad1a	100	52.132	ENSSSCG00000009193	SMARCAD1	77	65.895	Sus_scrofa
ENSONIG00000015059	smarcad1a	80	60.253	ENSTGUG00000003127	SMARCAD1	100	60.203	Taeniopygia_guttata
ENSONIG00000015059	smarcad1a	90	75.854	ENSTNIG00000017585	smarcad1a	73	85.826	Tetraodon_nigroviridis
ENSONIG00000015059	smarcad1a	90	69.109	ENSTBEG00000002789	SMARCAD1	82	69.109	Tupaia_belangeri
ENSONIG00000015059	smarcad1a	89	57.617	ENSTTRG00000000226	SMARCAD1	64	65.586	Tursiops_truncatus
ENSONIG00000015059	smarcad1a	89	57.732	ENSUAMG00000022262	SMARCAD1	67	66.296	Ursus_americanus
ENSONIG00000015059	smarcad1a	89	57.732	ENSUMAG00000004549	SMARCAD1	63	65.895	Ursus_maritimus
ENSONIG00000015059	smarcad1a	100	52.077	ENSVVUG00000007271	SMARCAD1	77	65.895	Vulpes_vulpes
ENSONIG00000015059	smarcad1a	89	54.063	ENSXETG00000019214	smarcad1	100	53.386	Xenopus_tropicalis
ENSONIG00000015059	smarcad1a	80	75.813	ENSXCOG00000005232	smarcad1a	76	84.790	Xiphophorus_couchianus
ENSONIG00000015059	smarcad1a	100	80.146	ENSXMAG00000015350	smarcad1a	81	84.243	Xiphophorus_maculatus