EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSONIG00000015672 (Gene tree)
Gene ID: 100709007
Gene Symbol: rpusd1
Alias: -
Full Name: RNA pseudouridine synthase domain containing 1
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Plus strand
Length: 1966 bases
Position: chrGL831298.1:381352-383317
Accession: ZDB-GENE-060929-444
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000019724	PseudoU_synth_2	PF00849.22	1.7e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000019741	-	924	-	ENSONIP00000019724	308 (aa)	-	I3KF29

Gene Model

Click here to download ENSONIG00000015672's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000015672's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000015672	rpusd1	99	56.958	ENSG00000007376	RPUSD1	99	67.066	Homo_sapiens
ENSONIG00000015672	rpusd1	100	82.468	ENSAPOG00000022221	rpusd1	99	83.766	Acanthochromis_polyacanthus
ENSONIG00000015672	rpusd1	99	57.980	ENSAMEG00000007461	RPUSD1	98	56.452	Ailuropoda_melanoleuca
ENSONIG00000015672	rpusd1	100	90.584	ENSACIG00000015863	rpusd1	99	90.584	Amphilophus_citrinellus
ENSONIG00000015672	rpusd1	100	83.766	ENSAOCG00000021975	rpusd1	96	84.416	Amphiprion_ocellaris
ENSONIG00000015672	rpusd1	100	84.091	ENSAPEG00000001316	rpusd1	96	84.740	Amphiprion_percula
ENSONIG00000015672	rpusd1	100	83.442	ENSATEG00000002984	rpusd1	99	84.091	Anabas_testudineus
ENSONIG00000015672	rpusd1	78	58.264	ENSAPLG00000012316	RPUSD1	98	58.264	Anas_platyrhynchos
ENSONIG00000015672	rpusd1	99	62.951	ENSACAG00000008953	RPUSD1	99	62.951	Anolis_carolinensis
ENSONIG00000015672	rpusd1	99	57.003	ENSANAG00000024709	RPUSD1	81	64.427	Aotus_nancymaae
ENSONIG00000015672	rpusd1	100	97.727	ENSACLG00000013692	rpusd1	99	97.727	Astatotilapia_calliptera
ENSONIG00000015672	rpusd1	99	68.852	ENSAMXG00000019802	rpusd1	99	66.450	Astyanax_mexicanus
ENSONIG00000015672	rpusd1	99	59.609	ENSBTAG00000000179	RPUSD1	82	67.194	Bos_taurus
ENSONIG00000015672	rpusd1	99	56.678	ENSCJAG00000012253	RPUSD1	98	56.818	Callithrix_jacchus
ENSONIG00000015672	rpusd1	99	57.003	ENSCAFG00000019614	RPUSD1	98	56.452	Canis_familiaris
ENSONIG00000015672	rpusd1	99	57.003	ENSCAFG00020008891	RPUSD1	98	56.452	Canis_lupus_dingo
ENSONIG00000015672	rpusd1	99	59.935	ENSCHIG00000012872	RPUSD1	98	57.680	Capra_hircus
ENSONIG00000015672	rpusd1	99	56.352	ENSTSYG00000036934	RPUSD1	98	55.700	Carlito_syrichta
ENSONIG00000015672	rpusd1	99	57.655	ENSCAPG00000014219	RPUSD1	83	64.032	Cavia_aperea
ENSONIG00000015672	rpusd1	99	57.655	ENSCPOG00000034604	RPUSD1	83	64.032	Cavia_porcellus
ENSONIG00000015672	rpusd1	99	56.678	ENSCCAG00000034385	RPUSD1	81	64.032	Cebus_capucinus
ENSONIG00000015672	rpusd1	99	57.282	ENSCATG00000042983	RPUSD1	98	57.605	Cercocebus_atys
ENSONIG00000015672	rpusd1	99	56.352	ENSCLAG00000013966	RPUSD1	83	64.427	Chinchilla_lanigera
ENSONIG00000015672	rpusd1	99	56.958	ENSCSAG00000012121	RPUSD1	98	57.282	Chlorocebus_sabaeus
ENSONIG00000015672	rpusd1	99	61.639	ENSCPBG00000021101	RPUSD1	99	61.639	Chrysemys_picta_bellii
ENSONIG00000015672	rpusd1	81	64.427	ENSCANG00000028576	RPUSD1	90	64.427	Colobus_angolensis_palliatus
ENSONIG00000015672	rpusd1	99	56.352	ENSCGRG00001014253	Rpusd1	98	55.627	Cricetulus_griseus_chok1gshd
ENSONIG00000015672	rpusd1	99	56.352	ENSCGRG00000017995	Rpusd1	98	55.627	Cricetulus_griseus_crigri
ENSONIG00000015672	rpusd1	99	81.967	ENSCSEG00000018512	rpusd1	98	81.967	Cynoglossus_semilaevis
ENSONIG00000015672	rpusd1	100	80.195	ENSCVAG00000022746	rpusd1	99	80.195	Cyprinodon_variegatus
ENSONIG00000015672	rpusd1	99	70.820	ENSDARG00000060192	rpusd1	99	68.197	Danio_rerio
ENSONIG00000015672	rpusd1	99	56.352	ENSDNOG00000003721	RPUSD1	98	56.352	Dasypus_novemcinctus
ENSONIG00000015672	rpusd1	99	57.003	ENSDORG00000026656	Rpusd1	98	58.632	Dipodomys_ordii
ENSONIG00000015672	rpusd1	97	46.984	ENSEBUG00000008767	rpusd1	79	52.874	Eptatretus_burgeri
ENSONIG00000015672	rpusd1	99	57.878	ENSEASG00005018421	RPUSD1	61	65.882	Equus_asinus_asinus
ENSONIG00000015672	rpusd1	100	71.429	ENSELUG00000014307	rpusd1	89	72.727	Esox_lucius
ENSONIG00000015672	rpusd1	99	57.980	ENSFCAG00000010359	RPUSD1	98	57.329	Felis_catus
ENSONIG00000015672	rpusd1	99	64.262	ENSFALG00000003211	RPUSD1	99	62.179	Ficedula_albicollis
ENSONIG00000015672	rpusd1	99	56.678	ENSFDAG00000013398	RPUSD1	98	54.430	Fukomys_damarensis
ENSONIG00000015672	rpusd1	100	77.273	ENSFHEG00000004736	rpusd1	99	79.870	Fundulus_heteroclitus
ENSONIG00000015672	rpusd1	99	74.516	ENSGMOG00000010756	rpusd1	99	74.516	Gadus_morhua
ENSONIG00000015672	rpusd1	99	62.295	ENSGALG00000005315	RPUSD1	99	62.295	Gallus_gallus
ENSONIG00000015672	rpusd1	100	77.922	ENSGAFG00000009886	rpusd1	99	77.922	Gambusia_affinis
ENSONIG00000015672	rpusd1	100	83.442	ENSGACG00000014276	rpusd1	99	84.091	Gasterosteus_aculeatus
ENSONIG00000015672	rpusd1	99	60.984	ENSGAGG00000004181	RPUSD1	99	60.984	Gopherus_agassizii
ENSONIG00000015672	rpusd1	99	57.605	ENSGGOG00000013997	RPUSD1	98	57.929	Gorilla_gorilla
ENSONIG00000015672	rpusd1	100	98.052	ENSHBUG00000023728	rpusd1	99	98.052	Haplochromis_burtoni
ENSONIG00000015672	rpusd1	99	55.700	ENSHGLG00000002595	RPUSD1	83	63.241	Heterocephalus_glaber_female
ENSONIG00000015672	rpusd1	99	55.700	ENSHGLG00100014303	RPUSD1	83	63.241	Heterocephalus_glaber_male
ENSONIG00000015672	rpusd1	99	77.049	ENSHCOG00000002390	rpusd1	99	77.049	Hippocampus_comes
ENSONIG00000015672	rpusd1	99	69.836	ENSIPUG00000001570	rpusd1	98	69.836	Ictalurus_punctatus
ENSONIG00000015672	rpusd1	99	57.329	ENSSTOG00000004276	RPUSD1	98	55.732	Ictidomys_tridecemlineatus
ENSONIG00000015672	rpusd1	99	57.655	ENSJJAG00000015696	Rpusd1	98	57.003	Jaculus_jaculus
ENSONIG00000015672	rpusd1	100	78.317	ENSKMAG00000017287	rpusd1	99	78.317	Kryptolebias_marmoratus
ENSONIG00000015672	rpusd1	100	80.195	ENSLBEG00000013354	RPUSD1	99	80.844	Labrus_bergylta
ENSONIG00000015672	rpusd1	100	80.195	ENSLBEG00000022502	rpusd1	99	80.844	Labrus_bergylta
ENSONIG00000015672	rpusd1	99	61.967	ENSLACG00000008869	RPUSD1	98	59.554	Latimeria_chalumnae
ENSONIG00000015672	rpusd1	70	80.556	ENSLOCG00000005682	rpusd1	99	80.556	Lepisosteus_oculatus
ENSONIG00000015672	rpusd1	99	56.026	ENSLAFG00000002115	RPUSD1	84	63.241	Loxodonta_africana
ENSONIG00000015672	rpusd1	99	57.282	ENSMFAG00000003961	RPUSD1	98	57.605	Macaca_fascicularis
ENSONIG00000015672	rpusd1	99	57.282	ENSMMUG00000000842	RPUSD1	98	57.605	Macaca_mulatta
ENSONIG00000015672	rpusd1	99	57.282	ENSMNEG00000042712	RPUSD1	98	57.605	Macaca_nemestrina
ENSONIG00000015672	rpusd1	99	57.282	ENSMLEG00000030591	RPUSD1	98	57.605	Mandrillus_leucophaeus
ENSONIG00000015672	rpusd1	100	83.766	ENSMAMG00000004735	rpusd1	99	85.065	Mastacembelus_armatus
ENSONIG00000015672	rpusd1	100	97.727	ENSMZEG00005003214	rpusd1	99	97.727	Maylandia_zebra
ENSONIG00000015672	rpusd1	98	61.921	ENSMGAG00000005447	RPUSD1	99	61.921	Meleagris_gallopavo
ENSONIG00000015672	rpusd1	81	56.522	ENSMAUG00000019998	Rpusd1	96	56.522	Mesocricetus_auratus
ENSONIG00000015672	rpusd1	99	56.678	ENSMICG00000017561	RPUSD1	78	73.529	Microcebus_murinus
ENSONIG00000015672	rpusd1	99	57.329	ENSMOCG00000014082	Rpusd1	98	57.980	Microtus_ochrogaster
ENSONIG00000015672	rpusd1	99	78.033	ENSMMOG00000012569	rpusd1	99	78.689	Mola_mola
ENSONIG00000015672	rpusd1	99	61.438	ENSMODG00000016882	RPUSD1	98	58.861	Monodelphis_domestica
ENSONIG00000015672	rpusd1	100	83.117	ENSMALG00000017818	rpusd1	99	84.740	Monopterus_albus
ENSONIG00000015672	rpusd1	99	57.003	MGP_CAROLIEiJ_G0021244	Rpusd1	98	57.980	Mus_caroli
ENSONIG00000015672	rpusd1	99	57.003	ENSMUSG00000041199	Rpusd1	98	57.980	Mus_musculus
ENSONIG00000015672	rpusd1	99	56.352	MGP_PahariEiJ_G0023562	Rpusd1	98	54.859	Mus_pahari
ENSONIG00000015672	rpusd1	99	57.003	MGP_SPRETEiJ_G0022155	Rpusd1	98	57.980	Mus_spretus
ENSONIG00000015672	rpusd1	97	57.285	ENSMPUG00000015897	RPUSD1	96	56.393	Mustela_putorius_furo
ENSONIG00000015672	rpusd1	99	57.980	ENSMLUG00000001089	RPUSD1	84	63.359	Myotis_lucifugus
ENSONIG00000015672	rpusd1	99	56.352	ENSNGAG00000003595	Rpusd1	83	64.427	Nannospalax_galili
ENSONIG00000015672	rpusd1	100	93.831	ENSNBRG00000006457	rpusd1	99	93.831	Neolamprologus_brichardi
ENSONIG00000015672	rpusd1	55	49.123	ENSNLEG00000008424	-	97	49.711	Nomascus_leucogenys
ENSONIG00000015672	rpusd1	99	61.639	ENSMEUG00000016049	RPUSD1	98	59.807	Notamacropus_eugenii
ENSONIG00000015672	rpusd1	99	51.140	ENSOPRG00000008340	RPUSD1	98	49.837	Ochotona_princeps
ENSONIG00000015672	rpusd1	99	57.329	ENSODEG00000016945	RPUSD1	83	64.032	Octodon_degus
ENSONIG00000015672	rpusd1	100	77.597	ENSORLG00000013009	rpusd1	99	77.597	Oryzias_latipes
ENSONIG00000015672	rpusd1	100	77.597	ENSORLG00020010382	rpusd1	99	77.597	Oryzias_latipes_hni
ENSONIG00000015672	rpusd1	100	76.948	ENSORLG00015021354	rpusd1	99	76.948	Oryzias_latipes_hsok
ENSONIG00000015672	rpusd1	100	75.649	ENSOMEG00000021426	rpusd1	99	75.974	Oryzias_melastigma
ENSONIG00000015672	rpusd1	99	56.678	ENSOGAG00000003795	RPUSD1	98	56.678	Otolemur_garnettii
ENSONIG00000015672	rpusd1	99	59.609	ENSOARG00000014254	RPUSD1	98	57.278	Ovis_aries
ENSONIG00000015672	rpusd1	99	57.282	ENSPPAG00000034797	RPUSD1	98	57.605	Pan_paniscus
ENSONIG00000015672	rpusd1	99	58.306	ENSPPRG00000012389	RPUSD1	98	57.655	Panthera_pardus
ENSONIG00000015672	rpusd1	99	58.252	ENSPTIG00000008545	RPUSD1	77	74.257	Panthera_tigris_altaica
ENSONIG00000015672	rpusd1	99	57.282	ENSPTRG00000007565	RPUSD1	98	57.605	Pan_troglodytes
ENSONIG00000015672	rpusd1	99	57.282	ENSPANG00000024401	RPUSD1	98	57.605	Papio_anubis
ENSONIG00000015672	rpusd1	100	68.831	ENSPKIG00000018890	rpusd1	90	66.877	Paramormyrops_kingsleyae
ENSONIG00000015672	rpusd1	99	62.295	ENSPSIG00000013945	RPUSD1	99	62.295	Pelodiscus_sinensis
ENSONIG00000015672	rpusd1	100	73.701	ENSPMGG00000014950	rpusd1	99	72.078	Periophthalmus_magnuspinnatus
ENSONIG00000015672	rpusd1	99	57.003	ENSPEMG00000000497	Rpusd1	98	57.655	Peromyscus_maniculatus_bairdii
ENSONIG00000015672	rpusd1	99	54.248	ENSPMAG00000001563	rpusd1	99	54.248	Petromyzon_marinus
ENSONIG00000015672	rpusd1	99	62.866	ENSPCIG00000021216	-	93	60.828	Phascolarctos_cinereus
ENSONIG00000015672	rpusd1	100	79.221	ENSPFOG00000007946	rpusd1	99	79.221	Poecilia_formosa
ENSONIG00000015672	rpusd1	100	79.545	ENSPLAG00000011925	rpusd1	99	79.221	Poecilia_latipinna
ENSONIG00000015672	rpusd1	100	79.221	ENSPMEG00000002910	rpusd1	99	79.221	Poecilia_mexicana
ENSONIG00000015672	rpusd1	100	80.844	ENSPREG00000019851	rpusd1	99	80.844	Poecilia_reticulata
ENSONIG00000015672	rpusd1	99	45.277	ENSPCAG00000002258	RPUSD1	84	49.407	Procavia_capensis
ENSONIG00000015672	rpusd1	99	56.352	ENSPCOG00000022582	RPUSD1	98	56.352	Propithecus_coquereli
ENSONIG00000015672	rpusd1	99	53.094	ENSPVAG00000013104	RPUSD1	98	53.094	Pteropus_vampyrus
ENSONIG00000015672	rpusd1	100	98.052	ENSPNYG00000024076	rpusd1	99	98.052	Pundamilia_nyererei
ENSONIG00000015672	rpusd1	99	67.213	ENSPNAG00000013806	rpusd1	99	65.472	Pygocentrus_nattereri
ENSONIG00000015672	rpusd1	99	57.143	ENSRNOG00000023639	Rpusd1	98	57.980	Rattus_norvegicus
ENSONIG00000015672	rpusd1	99	57.605	ENSRBIG00000030238	RPUSD1	98	57.929	Rhinopithecus_bieti
ENSONIG00000015672	rpusd1	99	57.605	ENSRROG00000036663	RPUSD1	98	57.929	Rhinopithecus_roxellana
ENSONIG00000015672	rpusd1	99	57.655	ENSSBOG00000033063	RPUSD1	98	57.329	Saimiri_boliviensis_boliviensis
ENSONIG00000015672	rpusd1	99	61.039	ENSSHAG00000013500	RPUSD1	98	59.425	Sarcophilus_harrisii
ENSONIG00000015672	rpusd1	99	71.475	ENSSFOG00015014394	rpusd1	99	68.489	Scleropages_formosus
ENSONIG00000015672	rpusd1	100	84.740	ENSSMAG00000008045	rpusd1	92	84.740	Scophthalmus_maximus
ENSONIG00000015672	rpusd1	86	89.773	ENSSDUG00000001829	rpusd1	96	87.662	Seriola_dumerili
ENSONIG00000015672	rpusd1	86	89.773	ENSSLDG00000020853	rpusd1	96	87.662	Seriola_lalandi_dorsalis
ENSONIG00000015672	rpusd1	54	72.455	ENSSARG00000011187	-	100	72.455	Sorex_araneus
ENSONIG00000015672	rpusd1	63	56.186	ENSSPUG00000005119	-	80	62.658	Sphenodon_punctatus
ENSONIG00000015672	rpusd1	100	87.338	ENSSPAG00000012708	rpusd1	99	87.338	Stegastes_partitus
ENSONIG00000015672	rpusd1	99	58.632	ENSSSCG00000008000	RPUSD1	98	66.142	Sus_scrofa
ENSONIG00000015672	rpusd1	81	69.323	ENSTGUG00000015375	RPUSD1	99	69.323	Taeniopygia_guttata
ENSONIG00000015672	rpusd1	100	80.844	ENSTRUG00000003041	rpusd1	98	80.844	Takifugu_rubripes
ENSONIG00000015672	rpusd1	99	71.895	ENSTNIG00000002660	rpusd1	96	80.843	Tetraodon_nigroviridis
ENSONIG00000015672	rpusd1	99	58.306	ENSTTRG00000010167	RPUSD1	81	66.403	Tursiops_truncatus
ENSONIG00000015672	rpusd1	99	57.329	ENSUAMG00000012736	RPUSD1	98	56.129	Ursus_americanus
ENSONIG00000015672	rpusd1	99	57.329	ENSUMAG00000021174	RPUSD1	94	63.077	Ursus_maritimus
ENSONIG00000015672	rpusd1	99	57.329	ENSVVUG00000012357	RPUSD1	98	56.452	Vulpes_vulpes
ENSONIG00000015672	rpusd1	99	62.623	ENSXETG00000007184	rpusd1	98	60.323	Xenopus_tropicalis
ENSONIG00000015672	rpusd1	100	78.247	ENSXCOG00000017930	rpusd1	99	78.247	Xiphophorus_couchianus
ENSONIG00000015672	rpusd1	100	78.896	ENSXMAG00000024084	rpusd1	99	78.896	Xiphophorus_maculatus