EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSONIG00000015728 (Gene tree)
Gene ID: -
Gene Symbol: sf1
Alias: -
Full Name: splicing factor 1
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Minus strand
Length: 13192 bases
Position: chrGL831614.1:120753-133944
Accession: ZDB-GENE-030131-2492
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000019793	KH_1	PF00013.29	2.8e-06	1	1
ENSONIP00000019793	zf-CCHC	PF00098.23	0.00039	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000019810	-	3554	-	ENSONIP00000019793	680 (aa)	-	I3KF98

Gene Model

Click here to download ENSONIG00000015728's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000015728's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000015728	sf1	97	92.911	ENSAPOG00000012341	sf1	67	92.325	Acanthochromis_polyacanthus
ENSONIG00000015728	sf1	97	87.632	ENSACIG00000016514	sf1	97	90.347	Amphilophus_citrinellus
ENSONIG00000015728	sf1	97	93.202	ENSAOCG00000010934	sf1	67	92.544	Amphiprion_ocellaris
ENSONIG00000015728	sf1	97	93.202	ENSAPEG00000009498	sf1	67	92.544	Amphiprion_percula
ENSONIG00000015728	sf1	67	90.570	ENSATEG00000001894	sf1	67	91.247	Anabas_testudineus
ENSONIG00000015728	sf1	61	77.570	ENSANAG00000026664	-	89	82.895	Aotus_nancymaae
ENSONIG00000015728	sf1	84	66.285	ENSANAG00000022607	-	88	74.263	Aotus_nancymaae
ENSONIG00000015728	sf1	100	94.126	ENSACLG00000007633	sf1	100	94.126	Astatotilapia_calliptera
ENSONIG00000015728	sf1	67	83.660	ENSAMXG00000003630	sf1	59	83.370	Astyanax_mexicanus
ENSONIG00000015728	sf1	61	77.262	ENSBTAG00000001035	SF1	61	82.895	Bos_taurus
ENSONIG00000015728	sf1	61	77.262	ENSCJAG00000002780	SF1	75	68.085	Callithrix_jacchus
ENSONIG00000015728	sf1	61	77.262	ENSCAFG00000014239	SF1	58	82.632	Canis_familiaris
ENSONIG00000015728	sf1	61	77.262	ENSCAFG00020014381	SF1	58	82.895	Canis_lupus_dingo
ENSONIG00000015728	sf1	61	77.262	ENSCHIG00000025867	SF1	58	82.895	Capra_hircus
ENSONIG00000015728	sf1	59	78.897	ENSCAPG00000010762	SF1	65	83.733	Cavia_aperea
ENSONIG00000015728	sf1	59	71.602	ENSCCAG00000023781	-	82	73.158	Cebus_capucinus
ENSONIG00000015728	sf1	61	77.262	ENSCCAG00000037881	SF1	89	82.895	Cebus_capucinus
ENSONIG00000015728	sf1	61	77.262	ENSCATG00000011564	SF1	89	82.895	Cercocebus_atys
ENSONIG00000015728	sf1	56	73.383	ENSCHOG00000006008	SF1	66	77.222	Choloepus_hoffmanni
ENSONIG00000015728	sf1	60	56.028	ENSCING00000005564	-	92	53.780	Ciona_intestinalis
ENSONIG00000015728	sf1	58	52.983	ENSCSAVG00000009055	-	72	61.238	Ciona_savignyi
ENSONIG00000015728	sf1	61	77.262	ENSCANG00000042201	SF1	89	82.895	Colobus_angolensis_palliatus
ENSONIG00000015728	sf1	61	77.030	ENSCGRG00001003677	Sf1	65	82.895	Cricetulus_griseus_chok1gshd
ENSONIG00000015728	sf1	59	76.596	ENSCGRG00000001708	Sf1	65	83.200	Cricetulus_griseus_crigri
ENSONIG00000015728	sf1	98	88.271	ENSCSEG00000014375	sf1	65	88.621	Cynoglossus_semilaevis
ENSONIG00000015728	sf1	98	90.240	ENSCVAG00000001670	sf1	67	91.429	Cyprinodon_variegatus
ENSONIG00000015728	sf1	85	82.474	ENSDARG00000008188	sf1	65	91.328	Danio_rerio
ENSONIG00000015728	sf1	61	77.262	ENSDORG00000016334	Sf1	58	82.895	Dipodomys_ordii
ENSONIG00000015728	sf1	59	72.947	ENSETEG00000012830	SF1	51	75.871	Echinops_telfairi
ENSONIG00000015728	sf1	53	77.984	ENSEEUG00000001058	SF1	83	83.284	Erinaceus_europaeus
ENSONIG00000015728	sf1	78	78.439	ENSELUG00000013225	sf1	60	84.199	Esox_lucius
ENSONIG00000015728	sf1	61	77.262	ENSFCAG00000012231	SF1	58	82.632	Felis_catus
ENSONIG00000015728	sf1	59	78.657	ENSFDAG00000009833	SF1	65	83.200	Fukomys_damarensis
ENSONIG00000015728	sf1	67	89.716	ENSFHEG00000022656	sf1	67	88.840	Fundulus_heteroclitus
ENSONIG00000015728	sf1	72	76.220	ENSGMOG00000007469	sf1	61	94.294	Gadus_morhua
ENSONIG00000015728	sf1	89	88.670	ENSGAFG00000019284	sf1	74	90.110	Gambusia_affinis
ENSONIG00000015728	sf1	62	79.861	ENSGAGG00000021691	SF1	68	70.782	Gopherus_agassizii
ENSONIG00000015728	sf1	100	99.559	ENSHBUG00000011598	sf1	100	99.559	Haplochromis_burtoni
ENSONIG00000015728	sf1	61	77.262	ENSHGLG00000009541	SF1	65	82.895	Heterocephalus_glaber_female
ENSONIG00000015728	sf1	55	71.707	ENSHGLG00100008255	-	70	78.125	Heterocephalus_glaber_male
ENSONIG00000015728	sf1	59	78.657	ENSHGLG00100013879	-	65	83.200	Heterocephalus_glaber_male
ENSONIG00000015728	sf1	56	74.084	ENSHGLG00100008076	-	68	77.778	Heterocephalus_glaber_male
ENSONIG00000015728	sf1	70	85.443	ENSHCOG00000011388	sf1	68	87.281	Hippocampus_comes
ENSONIG00000015728	sf1	59	78.657	ENSSTOG00000009790	-	59	82.850	Ictidomys_tridecemlineatus
ENSONIG00000015728	sf1	55	70.649	ENSSTOG00000024353	-	67	73.158	Ictidomys_tridecemlineatus
ENSONIG00000015728	sf1	61	77.030	ENSJJAG00000011788	Sf1	58	82.632	Jaculus_jaculus
ENSONIG00000015728	sf1	67	89.325	ENSKMAG00000005854	sf1	70	89.278	Kryptolebias_marmoratus
ENSONIG00000015728	sf1	83	87.689	ENSLBEG00000019836	sf1	72	88.503	Labrus_bergylta
ENSONIG00000015728	sf1	60	77.913	ENSLACG00000018493	SF1	68	78.933	Latimeria_chalumnae
ENSONIG00000015728	sf1	67	79.704	ENSLOCG00000002130	sf1	72	79.744	Lepisosteus_oculatus
ENSONIG00000015728	sf1	59	80.723	ENSLAFG00000007201	SF1	63	84.309	Loxodonta_africana
ENSONIG00000015728	sf1	61	77.262	ENSMFAG00000033122	SF1	89	82.895	Macaca_fascicularis
ENSONIG00000015728	sf1	61	77.262	ENSMMUG00000022606	SF1	90	82.632	Macaca_mulatta
ENSONIG00000015728	sf1	61	77.262	ENSMNEG00000037901	SF1	89	82.895	Macaca_nemestrina
ENSONIG00000015728	sf1	59	78.199	ENSMLEG00000040706	SF1	90	82.245	Mandrillus_leucophaeus
ENSONIG00000015728	sf1	67	93.202	ENSMAMG00000001780	sf1	67	93.217	Mastacembelus_armatus
ENSONIG00000015728	sf1	100	99.706	ENSMZEG00005009196	sf1	100	99.706	Maylandia_zebra
ENSONIG00000015728	sf1	61	75.515	ENSMAUG00000014064	Sf1	65	82.895	Mesocricetus_auratus
ENSONIG00000015728	sf1	61	77.262	ENSMICG00000001202	SF1	89	82.677	Microcebus_murinus
ENSONIG00000015728	sf1	61	76.798	ENSMOCG00000022038	Sf1	65	82.895	Microtus_ochrogaster
ENSONIG00000015728	sf1	67	88.596	ENSMMOG00000020474	sf1	67	87.965	Mola_mola
ENSONIG00000015728	sf1	59	76.690	ENSMODG00000029407	SF1	80	82.632	Monodelphis_domestica
ENSONIG00000015728	sf1	67	86.184	ENSMALG00000020521	sf1	73	86.214	Monopterus_albus
ENSONIG00000015728	sf1	61	75.515	MGP_CAROLIEiJ_G0022607	Sf1	99	95.489	Mus_caroli
ENSONIG00000015728	sf1	61	75.515	ENSMUSG00000024949	Sf1	99	95.489	Mus_musculus
ENSONIG00000015728	sf1	61	75.515	MGP_PahariEiJ_G0014101	Sf1	99	95.489	Mus_pahari
ENSONIG00000015728	sf1	61	75.515	MGP_SPRETEiJ_G0023518	Sf1	99	95.489	Mus_spretus
ENSONIG00000015728	sf1	59	76.869	ENSMPUG00000012684	SF1	58	82.895	Mustela_putorius_furo
ENSONIG00000015728	sf1	59	77.103	ENSMLUG00000015217	-	58	82.895	Myotis_lucifugus
ENSONIG00000015728	sf1	64	73.043	ENSMLUG00000029800	-	64	79.211	Myotis_lucifugus
ENSONIG00000015728	sf1	61	77.030	ENSNGAG00000005550	Sf1	65	82.632	Nannospalax_galili
ENSONIG00000015728	sf1	100	93.833	ENSNBRG00000017606	sf1	100	93.833	Neolamprologus_brichardi
ENSONIG00000015728	sf1	61	77.494	ENSNLEG00000005236	-	89	82.895	Nomascus_leucogenys
ENSONIG00000015728	sf1	58	77.143	ENSMEUG00000013424	SF1	69	83.065	Notamacropus_eugenii
ENSONIG00000015728	sf1	59	78.436	ENSOCUG00000026486	SF1	59	82.632	Oryctolagus_cuniculus
ENSONIG00000015728	sf1	69	87.768	ENSORLG00000011853	sf1	66	88.106	Oryzias_latipes
ENSONIG00000015728	sf1	69	88.197	ENSORLG00020011834	sf1	66	88.326	Oryzias_latipes_hni
ENSONIG00000015728	sf1	67	87.746	ENSORLG00015012855	sf1	66	87.665	Oryzias_latipes_hsok
ENSONIG00000015728	sf1	67	90.175	ENSOMEG00000005210	sf1	67	90.110	Oryzias_melastigma
ENSONIG00000015728	sf1	61	77.262	ENSOGAG00000016196	SF1	58	82.632	Otolemur_garnettii
ENSONIG00000015728	sf1	61	77.262	ENSOARG00000009166	SF1	65	82.632	Ovis_aries
ENSONIG00000015728	sf1	59	79.616	ENSPPAG00000002799	-	90	82.895	Pan_paniscus
ENSONIG00000015728	sf1	59	78.657	ENSPPRG00000013566	SF1	58	83.978	Panthera_pardus
ENSONIG00000015728	sf1	59	78.436	ENSPTIG00000016141	SF1	67	82.895	Panthera_tigris_altaica
ENSONIG00000015728	sf1	61	78.322	ENSPTRG00000003846	SF1	89	82.895	Pan_troglodytes
ENSONIG00000015728	sf1	61	77.030	ENSPANG00000020754	SF1	89	82.895	Papio_anubis
ENSONIG00000015728	sf1	61	75.515	ENSPEMG00000010463	Sf1	65	82.895	Peromyscus_maniculatus_bairdii
ENSONIG00000015728	sf1	61	76.869	ENSPCIG00000018173	SF1	60	82.632	Phascolarctos_cinereus
ENSONIG00000015728	sf1	97	89.728	ENSPFOG00000013683	sf1	67	90.549	Poecilia_formosa
ENSONIG00000015728	sf1	90	89.123	ENSPLAG00000018076	sf1	62	89.976	Poecilia_latipinna
ENSONIG00000015728	sf1	97	89.728	ENSPMEG00000005726	sf1	67	90.549	Poecilia_mexicana
ENSONIG00000015728	sf1	97	89.275	ENSPREG00000004155	sf1	67	89.670	Poecilia_reticulata
ENSONIG00000015728	sf1	61	77.262	ENSPPYG00000003098	-	70	82.632	Pongo_abelii
ENSONIG00000015728	sf1	61	77.262	ENSPCOG00000027546	SF1	89	82.677	Propithecus_coquereli
ENSONIG00000015728	sf1	61	76.256	ENSPVAG00000016938	SF1	75	69.034	Pteropus_vampyrus
ENSONIG00000015728	sf1	100	99.412	ENSPNYG00000004673	sf1	100	99.412	Pundamilia_nyererei
ENSONIG00000015728	sf1	67	83.406	ENSPNAG00000013072	sf1	67	83.333	Pygocentrus_nattereri
ENSONIG00000015728	sf1	61	75.515	ENSRNOG00000021085	Sf1	58	82.895	Rattus_norvegicus
ENSONIG00000015728	sf1	61	77.262	ENSRBIG00000042818	SF1	89	82.895	Rhinopithecus_bieti
ENSONIG00000015728	sf1	60	77.570	ENSRROG00000045655	SF1	90	82.245	Rhinopithecus_roxellana
ENSONIG00000015728	sf1	80	65.921	ENSSBOG00000022267	-	84	73.066	Saimiri_boliviensis_boliviensis
ENSONIG00000015728	sf1	72	71.515	ENSSHAG00000006841	SF1	68	84.718	Sarcophilus_harrisii
ENSONIG00000015728	sf1	71	80.287	ENSSFOG00015021978	sf1	66	81.798	Scleropages_formosus
ENSONIG00000015728	sf1	84	87.608	ENSSMAG00000007549	sf1	70	89.325	Scophthalmus_maximus
ENSONIG00000015728	sf1	67	92.123	ENSSDUG00000003903	sf1	70	93.668	Seriola_dumerili
ENSONIG00000015728	sf1	59	73.861	ENSSARG00000008180	SF1	71	77.836	Sorex_araneus
ENSONIG00000015728	sf1	59	79.720	ENSSPUG00000012907	SF1	58	85.352	Sphenodon_punctatus
ENSONIG00000015728	sf1	97	93.656	ENSSPAG00000019060	sf1	67	93.421	Stegastes_partitus
ENSONIG00000015728	sf1	61	75.973	ENSSSCG00000013021	SF1	58	82.895	Sus_scrofa
ENSONIG00000015728	sf1	73	71.165	ENSTNIG00000004820	sf1	72	77.635	Tetraodon_nigroviridis
ENSONIG00000015728	sf1	59	73.333	ENSTBEG00000013133	SF1	54	76.471	Tupaia_belangeri
ENSONIG00000015728	sf1	59	80.964	ENSUMAG00000007268	SF1	69	82.895	Ursus_maritimus
ENSONIG00000015728	sf1	85	72.326	ENSXETG00000008434	sf1	62	85.675	Xenopus_tropicalis
ENSONIG00000015728	sf1	71	86.400	ENSXCOG00000003704	sf1	69	92.582	Xiphophorus_couchianus
ENSONIG00000015728	sf1	97	89.275	ENSXMAG00000007822	sf1	70	90.570	Xiphophorus_maculatus