EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSONIG00000015730 (Gene tree)
Gene ID: 100708584
Gene Symbol: rbm4.1
Alias: -
Full Name: RNA-binding protein 4.1
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Minus strand
Length: 1970 bases
Position: chrGL831614.1:136547-138516
Accession: 100708584
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000019795	zf-CCHC	PF00098.23	3.8e-08	1	1
ENSONIP00000019795	RRM_5	PF13893.6	5.5e-08	1	1
ENSONIP00000019795	RRM_1	PF00076.22	4.7e-31	1	2
ENSONIP00000019795	RRM_1	PF00076.22	4.7e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000019812	-	1260	-	ENSONIP00000019795	419 (aa)	XP_005465439	I3KFA0

Gene Model

Click here to download ENSONIG00000015730's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000015730's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSONIG00000015730	rbm4.1	65	54.667	ENSONIG00000018378	rbm4.3	86	54.248
ENSONIG00000015730	rbm4.1	66	57.333	ENSONIG00000018380	-	94	51.381

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000015730	rbm4.1	100	90.736	ENSAPOG00000012353	rbm4.1	100	90.736	Acanthochromis_polyacanthus
ENSONIG00000015730	rbm4.1	100	97.852	ENSACIG00000016482	rbm4.1	100	97.852	Amphilophus_citrinellus
ENSONIG00000015730	rbm4.1	100	91.924	ENSAOCG00000010915	rbm4.1	100	91.924	Amphiprion_ocellaris
ENSONIG00000015730	rbm4.1	100	91.924	ENSAPEG00000009494	rbm4.1	100	91.924	Amphiprion_percula
ENSONIG00000015730	rbm4.1	100	91.211	ENSATEG00000001904	rbm4.1	100	91.211	Anabas_testudineus
ENSONIG00000015730	rbm4.1	99	47.002	ENSACLG00000007740	-	99	44.731	Astatotilapia_calliptera
ENSONIG00000015730	rbm4.1	100	99.523	ENSACLG00000007722	rbm4.1	100	99.523	Astatotilapia_calliptera
ENSONIG00000015730	rbm4.1	100	59.242	ENSAMXG00000036611	rbm4.1	100	62.559	Astyanax_mexicanus
ENSONIG00000015730	rbm4.1	100	74.224	ENSCSEG00000014365	rbm4.1	100	74.224	Cynoglossus_semilaevis
ENSONIG00000015730	rbm4.1	99	48.936	ENSCSEG00000014359	-	97	48.086	Cynoglossus_semilaevis
ENSONIG00000015730	rbm4.1	100	78.147	ENSCVAG00000019349	rbm4.1	100	78.147	Cyprinodon_variegatus
ENSONIG00000015730	rbm4.1	100	70.213	ENSDARG00000036386	rbm4.1	100	69.740	Danio_rerio
ENSONIG00000015730	rbm4.1	100	51.415	ENSDARG00000055080	rbm4.2	100	51.878	Danio_rerio
ENSONIG00000015730	rbm4.1	100	65.802	ENSELUG00000013205	rbm4.1	100	63.761	Esox_lucius
ENSONIG00000015730	rbm4.1	100	78.910	ENSFHEG00000022926	rbm4.1	100	78.673	Fundulus_heteroclitus
ENSONIG00000015730	rbm4.1	100	67.136	ENSGMOG00000007464	rbm4.1	100	68.632	Gadus_morhua
ENSONIG00000015730	rbm4.1	92	51.276	ENSGMOG00000007455	-	96	49.640	Gadus_morhua
ENSONIG00000015730	rbm4.1	100	77.305	ENSGAFG00000019302	rbm4.1	100	76.832	Gambusia_affinis
ENSONIG00000015730	rbm4.1	100	77.725	ENSGACG00000000822	rbm4.1	100	77.725	Gasterosteus_aculeatus
ENSONIG00000015730	rbm4.1	97	49.275	ENSGACG00000000821	-	97	46.853	Gasterosteus_aculeatus
ENSONIG00000015730	rbm4.1	100	99.523	ENSHBUG00000011610	rbm4.1	100	99.523	Haplochromis_burtoni
ENSONIG00000015730	rbm4.1	96	71.253	ENSHCOG00000011403	rbm4.1	99	70.660	Hippocampus_comes
ENSONIG00000015730	rbm4.1	100	49.409	ENSIPUG00000022937	rbm4.2	100	48.956	Ictalurus_punctatus
ENSONIG00000015730	rbm4.1	100	62.615	ENSIPUG00000022931	rbm4.1	100	63.699	Ictalurus_punctatus
ENSONIG00000015730	rbm4.1	100	80.142	ENSKMAG00000006556	rbm4.1	100	80.142	Kryptolebias_marmoratus
ENSONIG00000015730	rbm4.1	99	48.700	ENSLBEG00000019756	-	90	60.897	Labrus_bergylta
ENSONIG00000015730	rbm4.1	100	84.323	ENSLBEG00000019782	rbm4.1	100	84.323	Labrus_bergylta
ENSONIG00000015730	rbm4.1	98	50.591	ENSMAMG00000001760	-	98	48.810	Mastacembelus_armatus
ENSONIG00000015730	rbm4.1	100	91.686	ENSMAMG00000001765	rbm4.1	100	91.686	Mastacembelus_armatus
ENSONIG00000015730	rbm4.1	100	99.523	ENSMZEG00005009205	rbm4.1	100	99.523	Maylandia_zebra
ENSONIG00000015730	rbm4.1	100	87.943	ENSMMOG00000020479	rbm4.1	100	87.234	Mola_mola
ENSONIG00000015730	rbm4.1	100	88.599	ENSMALG00000020544	rbm4.1	100	88.599	Monopterus_albus
ENSONIG00000015730	rbm4.1	98	49.423	ENSMALG00000020557	-	98	48.936	Monopterus_albus
ENSONIG00000015730	rbm4.1	100	99.761	ENSNBRG00000017755	rbm4.1	100	99.761	Neolamprologus_brichardi
ENSONIG00000015730	rbm4.1	100	78.622	ENSORLG00000012496	rbm4.1	100	78.622	Oryzias_latipes
ENSONIG00000015730	rbm4.1	100	78.622	ENSORLG00020012454	rbm4.1	100	78.622	Oryzias_latipes_hni
ENSONIG00000015730	rbm4.1	100	78.860	ENSORLG00015013678	rbm4.1	100	78.860	Oryzias_latipes_hsok
ENSONIG00000015730	rbm4.1	100	79.572	ENSOMEG00000001001	rbm4.1	100	79.572	Oryzias_melastigma
ENSONIG00000015730	rbm4.1	100	64.953	ENSPKIG00000020805	rbm4.1	85	79.710	Paramormyrops_kingsleyae
ENSONIG00000015730	rbm4.1	99	47.837	ENSPFOG00000012685	-	99	45.902	Poecilia_formosa
ENSONIG00000015730	rbm4.1	100	77.541	ENSPFOG00000012675	rbm4.1	100	77.069	Poecilia_formosa
ENSONIG00000015730	rbm4.1	100	77.541	ENSPLAG00000018572	rbm4.1	100	77.069	Poecilia_latipinna
ENSONIG00000015730	rbm4.1	100	77.541	ENSPMEG00000006290	rbm4.1	100	77.069	Poecilia_mexicana
ENSONIG00000015730	rbm4.1	100	77.541	ENSPREG00000003724	rbm4.1	100	77.069	Poecilia_reticulata
ENSONIG00000015730	rbm4.1	99	45.913	ENSPREG00000003764	-	87	65.761	Poecilia_reticulata
ENSONIG00000015730	rbm4.1	100	99.523	ENSPNYG00000004662	rbm4.1	100	99.523	Pundamilia_nyererei
ENSONIG00000015730	rbm4.1	100	68.000	ENSPNAG00000002539	rbm4.1	100	68.000	Pygocentrus_nattereri
ENSONIG00000015730	rbm4.1	100	51.163	ENSPNAG00000013057	rbm4.2	100	51.163	Pygocentrus_nattereri
ENSONIG00000015730	rbm4.1	100	64.720	ENSSFOG00015021996	sf1	100	64.019	Scleropages_formosus
ENSONIG00000015730	rbm4.1	100	85.511	ENSSMAG00000007571	rbm4.1	100	83.848	Scophthalmus_maximus
ENSONIG00000015730	rbm4.1	100	91.924	ENSSDUG00000003925	rbm4.1	100	91.924	Seriola_dumerili
ENSONIG00000015730	rbm4.1	97	51.675	ENSSDUG00000003936	-	99	49.292	Seriola_dumerili
ENSONIG00000015730	rbm4.1	100	91.924	ENSSLDG00000013147	rbm4.1	100	91.924	Seriola_lalandi_dorsalis
ENSONIG00000015730	rbm4.1	97	49.639	ENSSLDG00000013157	-	99	49.412	Seriola_lalandi_dorsalis
ENSONIG00000015730	rbm4.1	99	48.926	ENSSPAG00000019046	-	99	46.154	Stegastes_partitus
ENSONIG00000015730	rbm4.1	100	91.469	ENSSPAG00000019053	rbm4.1	100	93.365	Stegastes_partitus
ENSONIG00000015730	rbm4.1	99	48.317	ENSTRUG00000013328	-	99	46.244	Takifugu_rubripes
ENSONIG00000015730	rbm4.1	100	78.622	ENSTRUG00000013334	rbm4.1	100	77.672	Takifugu_rubripes
ENSONIG00000015730	rbm4.1	78	88.725	ENSTNIG00000004821	rbm4.1	97	91.753	Tetraodon_nigroviridis
ENSONIG00000015730	rbm4.1	100	77.541	ENSXCOG00000003731	rbm4.1	100	77.069	Xiphophorus_couchianus
ENSONIG00000015730	rbm4.1	99	67.391	ENSXMAG00000008059	-	86	67.391	Xiphophorus_maculatus
ENSONIG00000015730	rbm4.1	100	77.305	ENSXMAG00000008069	rbm4.1	100	76.832	Xiphophorus_maculatus