EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSONIG00000015895 (Gene tree)
Gene ID: 100704810
Gene Symbol: polr1a
Alias: -
Full Name: RNA polymerase I subunit A
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Plus strand
Length: 25826 bases
Position: chrGL831239.1:1990791-2016616
Accession: ZDB-GENE-030131-5286
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000020020	RNA_pol_Rpb1_5	PF04998.17	6.9e-100	1	1
ENSONIP00000020020	RNA_pol_Rpb1_4	PF05000.17	7.6e-21	1	1
ENSONIP00000020020	RNA_pol_Rpb1_2	PF00623.20	1e-67	1	1
ENSONIP00000020020	RNA_pol_Rpb1_3	PF04983.18	2.3e-37	1	1
ENSONIP00000020020	RNA_pol_Rpb1_1	PF04997.12	2.1e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000020037	-	5094	-	ENSONIP00000020020	1697 (aa)	-	I3KFX5

Gene Model

Click here to download ENSONIG00000015895's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000015895's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSONIG00000015895	polr1a	62	32.789	ENSONIG00000016129	polr3a	68	32.717

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000015895	polr1a	100	66.184	ENSG00000068654	POLR1A	100	66.068	Homo_sapiens
ENSONIG00000015895	polr1a	70	87.669	ENSAPOG00000017945	polr1a	99	87.838	Acanthochromis_polyacanthus
ENSONIG00000015895	polr1a	100	65.990	ENSAMEG00000005807	POLR1A	100	69.348	Ailuropoda_melanoleuca
ENSONIG00000015895	polr1a	97	89.797	ENSACIG00000022147	polr1a	100	89.316	Amphilophus_citrinellus
ENSONIG00000015895	polr1a	100	86.318	ENSAOCG00000017336	polr1a	100	87.179	Amphiprion_ocellaris
ENSONIG00000015895	polr1a	100	86.318	ENSAPEG00000016105	polr1a	100	86.671	Amphiprion_percula
ENSONIG00000015895	polr1a	100	86.862	ENSATEG00000016773	polr1a	100	85.689	Anabas_testudineus
ENSONIG00000015895	polr1a	86	67.344	ENSAPLG00000013871	POLR1A	99	67.459	Anas_platyrhynchos
ENSONIG00000015895	polr1a	99	64.743	ENSACAG00000012141	POLR1A	99	64.662	Anolis_carolinensis
ENSONIG00000015895	polr1a	100	65.759	ENSANAG00000033927	POLR1A	100	65.585	Aotus_nancymaae
ENSONIG00000015895	polr1a	100	87.691	ENSACLG00000020541	polr1a	100	87.222	Astatotilapia_calliptera
ENSONIG00000015895	polr1a	100	66.241	ENSBTAG00000006481	POLR1A	100	66.241	Bos_taurus
ENSONIG00000015895	polr1a	99	38.085	WBGene00012999	rpoa-1	77	58.696	Caenorhabditis_elegans
ENSONIG00000015895	polr1a	100	65.434	ENSCJAG00000019547	POLR1A	100	65.779	Callithrix_jacchus
ENSONIG00000015895	polr1a	100	66.763	ENSCAFG00000007613	POLR1A	100	66.763	Canis_familiaris
ENSONIG00000015895	polr1a	100	66.609	ENSCAFG00020014752	POLR1A	100	66.609	Canis_lupus_dingo
ENSONIG00000015895	polr1a	100	66.182	ENSCHIG00000018204	POLR1A	100	65.987	Capra_hircus
ENSONIG00000015895	polr1a	100	65.471	ENSTSYG00000002761	POLR1A	100	65.197	Carlito_syrichta
ENSONIG00000015895	polr1a	97	62.270	ENSCAPG00000010132	POLR1A	100	63.265	Cavia_aperea
ENSONIG00000015895	polr1a	100	65.438	ENSCPOG00000012350	POLR1A	100	66.434	Cavia_porcellus
ENSONIG00000015895	polr1a	100	65.972	ENSCCAG00000019839	POLR1A	100	65.895	Cebus_capucinus
ENSONIG00000015895	polr1a	100	66.242	ENSCATG00000029786	POLR1A	100	66.242	Cercocebus_atys
ENSONIG00000015895	polr1a	100	65.365	ENSCLAG00000005187	POLR1A	100	66.165	Chinchilla_lanigera
ENSONIG00000015895	polr1a	100	66.242	ENSCSAG00000016251	POLR1A	100	66.184	Chlorocebus_sabaeus
ENSONIG00000015895	polr1a	99	66.841	ENSCPBG00000001115	POLR1A	99	67.076	Chrysemys_picta_bellii
ENSONIG00000015895	polr1a	99	47.381	ENSCSAVG00000007184	-	99	46.784	Ciona_savignyi
ENSONIG00000015895	polr1a	100	63.484	ENSCANG00000031785	POLR1A	100	63.426	Colobus_angolensis_palliatus
ENSONIG00000015895	polr1a	100	61.343	ENSCGRG00001006651	Polr1a	100	61.681	Cricetulus_griseus_chok1gshd
ENSONIG00000015895	polr1a	60	64.334	ENSCGRG00000010834	Polr1a	100	64.912	Cricetulus_griseus_crigri
ENSONIG00000015895	polr1a	100	77.745	ENSCSEG00000020190	polr1a	100	77.563	Cynoglossus_semilaevis
ENSONIG00000015895	polr1a	100	80.491	ENSCVAG00000020941	polr1a	100	80.549	Cyprinodon_variegatus
ENSONIG00000015895	polr1a	100	72.264	ENSDARG00000098375	polr1a	100	72.791	Danio_rerio
ENSONIG00000015895	polr1a	100	63.673	ENSDNOG00000010829	POLR1A	100	63.673	Dasypus_novemcinctus
ENSONIG00000015895	polr1a	100	65.757	ENSDORG00000008298	Polr1a	100	65.641	Dipodomys_ordii
ENSONIG00000015895	polr1a	79	44.133	FBgn0019938	RpI1	99	42.139	Drosophila_melanogaster
ENSONIG00000015895	polr1a	72	87.500	ENSETEG00000000412	-	71	87.500	Echinops_telfairi
ENSONIG00000015895	polr1a	89	46.863	ENSEBUG00000005667	-	99	46.879	Eptatretus_burgeri
ENSONIG00000015895	polr1a	100	66.031	ENSEASG00005001625	POLR1A	100	66.358	Equus_asinus_asinus
ENSONIG00000015895	polr1a	100	66.147	ENSECAG00000010092	POLR1A	99	69.804	Equus_caballus
ENSONIG00000015895	polr1a	100	66.147	ENSECAG00000030510	-	99	69.804	Equus_caballus
ENSONIG00000015895	polr1a	100	66.147	ENSECAG00000036306	-	99	69.804	Equus_caballus
ENSONIG00000015895	polr1a	85	76.851	ENSEEUG00000000676	POLR1A	85	76.851	Erinaceus_europaeus
ENSONIG00000015895	polr1a	100	74.461	ENSELUG00000012769	polr1a	99	74.461	Esox_lucius
ENSONIG00000015895	polr1a	100	65.761	ENSFCAG00000008966	POLR1A	100	66.551	Felis_catus
ENSONIG00000015895	polr1a	99	65.687	ENSFALG00000010082	POLR1A	99	65.845	Ficedula_albicollis
ENSONIG00000015895	polr1a	100	65.547	ENSFDAG00000013726	POLR1A	100	65.531	Fukomys_damarensis
ENSONIG00000015895	polr1a	100	78.332	ENSFHEG00000005996	polr1a	100	77.902	Fundulus_heteroclitus
ENSONIG00000015895	polr1a	100	68.768	ENSGMOG00000002230	polr1a	100	68.019	Gadus_morhua
ENSONIG00000015895	polr1a	90	64.073	ENSGALG00000038160	-	99	64.137	Gallus_gallus
ENSONIG00000015895	polr1a	100	80.492	ENSGAFG00000015266	polr1a	100	80.609	Gambusia_affinis
ENSONIG00000015895	polr1a	100	80.393	ENSGACG00000018791	polr1a	100	80.740	Gasterosteus_aculeatus
ENSONIG00000015895	polr1a	89	68.087	ENSGAGG00000004984	-	99	67.913	Gopherus_agassizii
ENSONIG00000015895	polr1a	100	66.184	ENSGGOG00000001788	POLR1A	100	66.068	Gorilla_gorilla
ENSONIG00000015895	polr1a	90	96.127	ENSHBUG00000020021	polr1a	100	96.127	Haplochromis_burtoni
ENSONIG00000015895	polr1a	100	66.338	ENSHGLG00000006334	POLR1A	100	66.395	Heterocephalus_glaber_female
ENSONIG00000015895	polr1a	100	66.146	ENSHGLG00100006614	POLR1A	100	66.203	Heterocephalus_glaber_male
ENSONIG00000015895	polr1a	100	76.761	ENSHCOG00000003345	polr1a	100	76.436	Hippocampus_comes
ENSONIG00000015895	polr1a	100	71.813	ENSIPUG00000013174	polr1a	100	71.512	Ictalurus_punctatus
ENSONIG00000015895	polr1a	99	65.908	ENSSTOG00000012580	POLR1A	100	65.469	Ictidomys_tridecemlineatus
ENSONIG00000015895	polr1a	100	65.723	ENSJJAG00000013113	Polr1a	100	65.976	Jaculus_jaculus
ENSONIG00000015895	polr1a	100	84.747	ENSKMAG00000007399	polr1a	100	84.747	Kryptolebias_marmoratus
ENSONIG00000015895	polr1a	94	85.349	ENSLBEG00000015401	polr1a	99	86.131	Labrus_bergylta
ENSONIG00000015895	polr1a	54	70.499	ENSLACG00000003218	polr1a	100	70.499	Latimeria_chalumnae
ENSONIG00000015895	polr1a	100	71.536	ENSLOCG00000010881	polr1a	100	71.346	Lepisosteus_oculatus
ENSONIG00000015895	polr1a	100	66.048	ENSLAFG00000014948	POLR1A	100	66.069	Loxodonta_africana
ENSONIG00000015895	polr1a	100	65.953	ENSMFAG00000046097	POLR1A	100	66.184	Macaca_fascicularis
ENSONIG00000015895	polr1a	100	65.953	ENSMMUG00000015815	POLR1A	100	66.184	Macaca_mulatta
ENSONIG00000015895	polr1a	100	65.953	ENSMNEG00000043313	POLR1A	100	66.184	Macaca_nemestrina
ENSONIG00000015895	polr1a	100	65.837	ENSMLEG00000042428	POLR1A	100	65.837	Mandrillus_leucophaeus
ENSONIG00000015895	polr1a	100	85.580	ENSMAMG00000016565	polr1a	100	85.580	Mastacembelus_armatus
ENSONIG00000015895	polr1a	100	97.057	ENSMZEG00005004915	polr1a	100	97.057	Maylandia_zebra
ENSONIG00000015895	polr1a	99	63.210	ENSMGAG00000013111	POLR1A	99	63.268	Meleagris_gallopavo
ENSONIG00000015895	polr1a	92	65.256	ENSMAUG00000008497	Polr1a	100	65.212	Mesocricetus_auratus
ENSONIG00000015895	polr1a	100	66.010	ENSMICG00000000757	POLR1A	100	65.953	Microcebus_murinus
ENSONIG00000015895	polr1a	100	66.009	ENSMOCG00000000122	Polr1a	100	66.241	Microtus_ochrogaster
ENSONIG00000015895	polr1a	100	80.492	ENSMMOG00000010216	polr1a	100	80.094	Mola_mola
ENSONIG00000015895	polr1a	100	85.404	ENSMALG00000013363	polr1a	100	85.346	Monopterus_albus
ENSONIG00000015895	polr1a	100	65.009	MGP_CAROLIEiJ_G0028494	Polr1a	100	65.255	Mus_caroli
ENSONIG00000015895	polr1a	100	65.411	ENSMUSG00000049553	Polr1a	100	65.371	Mus_musculus
ENSONIG00000015895	polr1a	100	65.057	MGP_PahariEiJ_G0022230	Polr1a	100	65.990	Mus_pahari
ENSONIG00000015895	polr1a	100	63.952	MGP_SPRETEiJ_G0029499	Polr1a	100	64.237	Mus_spretus
ENSONIG00000015895	polr1a	100	65.875	ENSMPUG00000009135	POLR1A	100	66.377	Mustela_putorius_furo
ENSONIG00000015895	polr1a	100	65.859	ENSMLUG00000015723	POLR1A	100	65.917	Myotis_lucifugus
ENSONIG00000015895	polr1a	100	66.068	ENSNGAG00000017907	Polr1a	100	66.145	Nannospalax_galili
ENSONIG00000015895	polr1a	100	96.939	ENSNBRG00000000519	polr1a	100	96.939	Neolamprologus_brichardi
ENSONIG00000015895	polr1a	100	64.553	ENSNLEG00000002264	POLR1A	100	64.496	Nomascus_leucogenys
ENSONIG00000015895	polr1a	75	80.315	ENSMEUG00000011665	-	75	80.315	Notamacropus_eugenii
ENSONIG00000015895	polr1a	99	61.275	ENSOPRG00000008269	POLR1A	100	60.222	Ochotona_princeps
ENSONIG00000015895	polr1a	100	66.281	ENSODEG00000003542	POLR1A	100	66.473	Octodon_degus
ENSONIG00000015895	polr1a	100	65.573	ENSOCUG00000010138	POLR1A	100	66.589	Oryctolagus_cuniculus
ENSONIG00000015895	polr1a	100	81.775	ENSORLG00000008753	polr1a	99	81.775	Oryzias_latipes
ENSONIG00000015895	polr1a	100	78.509	ENSORLG00020020726	polr1a	99	78.156	Oryzias_latipes_hni
ENSONIG00000015895	polr1a	95	88.298	ENSORLG00015016071	polr1a	98	88.298	Oryzias_latipes_hsok
ENSONIG00000015895	polr1a	100	65.779	ENSOGAG00000004031	POLR1A	100	65.721	Otolemur_garnettii
ENSONIG00000015895	polr1a	100	65.484	ENSOARG00000020601	POLR1A	100	66.416	Ovis_aries
ENSONIG00000015895	polr1a	100	65.895	ENSPPAG00000042450	POLR1A	100	65.779	Pan_paniscus
ENSONIG00000015895	polr1a	100	66.397	ENSPPRG00000006702	POLR1A	100	66.725	Panthera_pardus
ENSONIG00000015895	polr1a	100	65.879	ENSPTIG00000018783	POLR1A	100	66.205	Panthera_tigris_altaica
ENSONIG00000015895	polr1a	100	65.953	ENSPTRG00000012147	POLR1A	100	65.895	Pan_troglodytes
ENSONIG00000015895	polr1a	100	66.068	ENSPANG00000025908	POLR1A	100	66.068	Papio_anubis
ENSONIG00000015895	polr1a	100	70.955	ENSPKIG00000005468	polr1a	98	75.694	Paramormyrops_kingsleyae
ENSONIG00000015895	polr1a	63	66.356	ENSPSIG00000009321	-	99	66.356	Pelodiscus_sinensis
ENSONIG00000015895	polr1a	55	81.283	ENSPMGG00000009718	polr1a	95	81.283	Periophthalmus_magnuspinnatus
ENSONIG00000015895	polr1a	100	65.665	ENSPEMG00000022224	Polr1a	100	65.913	Peromyscus_maniculatus_bairdii
ENSONIG00000015895	polr1a	95	64.957	ENSPCIG00000004222	POLR1A	99	64.853	Phascolarctos_cinereus
ENSONIG00000015895	polr1a	100	81.477	ENSPFOG00000005025	polr1a	100	81.871	Poecilia_formosa
ENSONIG00000015895	polr1a	100	81.781	ENSPLAG00000021389	polr1a	100	82.015	Poecilia_latipinna
ENSONIG00000015895	polr1a	100	77.739	ENSPMEG00000006463	polr1a	100	78.825	Poecilia_mexicana
ENSONIG00000015895	polr1a	100	81.510	ENSPREG00000002389	polr1a	100	81.616	Poecilia_reticulata
ENSONIG00000015895	polr1a	100	65.953	ENSPPYG00000012217	POLR1A	100	65.895	Pongo_abelii
ENSONIG00000015895	polr1a	91	64.352	ENSPCAG00000011582	POLR1A	91	64.352	Procavia_capensis
ENSONIG00000015895	polr1a	100	66.126	ENSPCOG00000026987	POLR1A	100	66.126	Propithecus_coquereli
ENSONIG00000015895	polr1a	94	66.127	ENSPVAG00000012674	POLR1A	95	66.127	Pteropus_vampyrus
ENSONIG00000015895	polr1a	100	96.881	ENSPNYG00000000026	polr1a	100	96.881	Pundamilia_nyererei
ENSONIG00000015895	polr1a	100	72.780	ENSPNAG00000019223	polr1a	100	71.895	Pygocentrus_nattereri
ENSONIG00000015895	polr1a	100	65.699	ENSRNOG00000009545	Polr1a	100	66.164	Rattus_norvegicus
ENSONIG00000015895	polr1a	100	65.547	ENSRBIG00000028335	POLR1A	100	66.010	Rhinopithecus_bieti
ENSONIG00000015895	polr1a	100	65.547	ENSRROG00000031473	POLR1A	100	66.010	Rhinopithecus_roxellana
ENSONIG00000015895	polr1a	99	36.216	YOR341W	RPA190	99	35.698	Saccharomyces_cerevisiae
ENSONIG00000015895	polr1a	100	65.856	ENSSBOG00000030262	POLR1A	100	65.895	Saimiri_boliviensis_boliviensis
ENSONIG00000015895	polr1a	100	60.482	ENSSHAG00000014739	POLR1A	100	60.425	Sarcophilus_harrisii
ENSONIG00000015895	polr1a	100	70.478	ENSSFOG00015019716	polr1a	100	70.140	Scleropages_formosus
ENSONIG00000015895	polr1a	100	85.203	ENSSMAG00000014342	polr1a	100	85.203	Scophthalmus_maximus
ENSONIG00000015895	polr1a	100	87.786	ENSSDUG00000014631	polr1a	100	87.904	Seriola_dumerili
ENSONIG00000015895	polr1a	100	84.381	ENSSLDG00000024095	polr1a	100	84.204	Seriola_lalandi_dorsalis
ENSONIG00000015895	polr1a	70	95.122	ENSSARG00000003136	-	71	95.122	Sorex_araneus
ENSONIG00000015895	polr1a	100	64.925	ENSSPUG00000004215	POLR1A	97	72.000	Sphenodon_punctatus
ENSONIG00000015895	polr1a	66	88.688	ENSSPAG00000016341	polr1a	96	88.688	Stegastes_partitus
ENSONIG00000015895	polr1a	84	67.294	ENSSSCG00000008226	POLR1A	99	67.203	Sus_scrofa
ENSONIG00000015895	polr1a	99	64.941	ENSTGUG00000010704	POLR1A	100	64.416	Taeniopygia_guttata
ENSONIG00000015895	polr1a	100	79.353	ENSTRUG00000002210	polr1a	99	79.083	Takifugu_rubripes
ENSONIG00000015895	polr1a	100	72.896	ENSTNIG00000010116	polr1a	100	72.780	Tetraodon_nigroviridis
ENSONIG00000015895	polr1a	73	82.301	ENSTBEG00000008646	POLR1A	74	82.301	Tupaia_belangeri
ENSONIG00000015895	polr1a	100	64.132	ENSTTRG00000008597	POLR1A	100	64.058	Tursiops_truncatus
ENSONIG00000015895	polr1a	68	66.835	ENSUAMG00000012158	-	94	67.712	Ursus_americanus
ENSONIG00000015895	polr1a	100	65.685	ENSUMAG00000006700	POLR1A	100	66.161	Ursus_maritimus
ENSONIG00000015895	polr1a	100	66.647	ENSVVUG00000001245	POLR1A	100	66.647	Vulpes_vulpes
ENSONIG00000015895	polr1a	100	63.042	ENSXETG00000001952	polr1a	99	64.829	Xenopus_tropicalis
ENSONIG00000015895	polr1a	100	82.164	ENSXMAG00000004032	polr1a	100	81.557	Xiphophorus_maculatus