EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSONIG00000016129 (Gene tree)
Gene ID: -
Gene Symbol: polr3a
Alias: -
Full Name: RNA polymerase III subunit A
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Minus strand
Length: 24463 bases
Position: chrGL831148.1:2765044-2789506
Accession: 100698561
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000020316	RNA_pol_Rpb1_5	PF04998.17	1.3e-88	1	1
ENSONIP00000020316	RNA_pol_Rpb1_4	PF05000.17	4.6e-32	1	1
ENSONIP00000020316	RNA_pol_Rpb1_2	PF00623.20	1.7e-72	1	1
ENSONIP00000020316	RNA_pol_Rpb1_3	PF04983.18	1.9e-40	1	1
ENSONIP00000020316	RNA_pol_Rpb1_1	PF04997.12	1.1e-91	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000020333	-	4173	-	ENSONIP00000020316	1390 (aa)	XP_013124958	I3KGS1

Gene Model

Click here to download ENSONIG00000016129's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000016129's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSONIG00000016129	polr3a	91	37.707	ENSONIG00000009231	polr2a	66	38.184
ENSONIG00000016129	polr3a	68	32.717	ENSONIG00000015895	polr1a	62	32.789

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000016129	polr3a	100	90.000	ENSG00000148606	POLR3A	100	90.000	Homo_sapiens
ENSONIG00000016129	polr3a	62	93.612	ENSAPOG00000022727	polr3a	99	93.612	Acanthochromis_polyacanthus
ENSONIG00000016129	polr3a	100	89.734	ENSAMEG00000017801	POLR3A	100	89.734	Ailuropoda_melanoleuca
ENSONIG00000016129	polr3a	94	98.308	ENSACIG00000024504	polr3a	97	98.308	Amphilophus_citrinellus
ENSONIG00000016129	polr3a	100	97.050	ENSAOCG00000002071	polr3a	100	97.050	Amphiprion_ocellaris
ENSONIG00000016129	polr3a	100	93.741	ENSAOCG00000003949	-	100	93.741	Amphiprion_ocellaris
ENSONIG00000016129	polr3a	100	97.050	ENSAPEG00000013351	polr3a	100	97.050	Amphiprion_percula
ENSONIG00000016129	polr3a	100	96.906	ENSAPEG00000001966	-	100	96.906	Amphiprion_percula
ENSONIG00000016129	polr3a	100	97.266	ENSATEG00000023277	polr3a	100	97.266	Anabas_testudineus
ENSONIG00000016129	polr3a	99	90.618	ENSAPLG00000015878	POLR3A	99	90.618	Anas_platyrhynchos
ENSONIG00000016129	polr3a	93	89.152	ENSACAG00000007985	POLR3A	99	89.152	Anolis_carolinensis
ENSONIG00000016129	polr3a	100	87.500	ENSANAG00000028922	POLR3A	96	92.357	Aotus_nancymaae
ENSONIG00000016129	polr3a	100	99.424	ENSACLG00000005914	polr3a	100	99.424	Astatotilapia_calliptera
ENSONIG00000016129	polr3a	100	89.784	ENSAMXG00000018852	polr3a	100	89.784	Astyanax_mexicanus
ENSONIG00000016129	polr3a	100	90.072	ENSBTAG00000013259	POLR3A	100	90.072	Bos_taurus
ENSONIG00000016129	polr3a	98	56.908	WBGene00004411	rpc-1	99	56.908	Caenorhabditis_elegans
ENSONIG00000016129	polr3a	100	89.784	ENSCJAG00000001015	POLR3A	100	89.784	Callithrix_jacchus
ENSONIG00000016129	polr3a	100	89.856	ENSCAFG00000015546	POLR3A	100	89.856	Canis_familiaris
ENSONIG00000016129	polr3a	100	89.856	ENSCAFG00020014711	POLR3A	100	89.856	Canis_lupus_dingo
ENSONIG00000016129	polr3a	100	89.784	ENSCHIG00000000352	POLR3A	100	89.784	Capra_hircus
ENSONIG00000016129	polr3a	100	89.424	ENSTSYG00000006671	POLR3A	100	89.424	Carlito_syrichta
ENSONIG00000016129	polr3a	99	89.673	ENSCAPG00000016031	POLR3A	100	89.673	Cavia_aperea
ENSONIG00000016129	polr3a	100	89.712	ENSCPOG00000022387	POLR3A	100	89.712	Cavia_porcellus
ENSONIG00000016129	polr3a	100	88.345	ENSCCAG00000032995	POLR3A	100	88.345	Cebus_capucinus
ENSONIG00000016129	polr3a	100	90.000	ENSCATG00000035842	POLR3A	100	90.000	Cercocebus_atys
ENSONIG00000016129	polr3a	100	89.856	ENSCLAG00000009629	POLR3A	100	89.856	Chinchilla_lanigera
ENSONIG00000016129	polr3a	100	90.000	ENSCSAG00000009292	POLR3A	100	90.000	Chlorocebus_sabaeus
ENSONIG00000016129	polr3a	81	81.494	ENSCHOG00000008368	POLR3A	95	81.494	Choloepus_hoffmanni
ENSONIG00000016129	polr3a	99	90.569	ENSCPBG00000002079	POLR3A	99	90.569	Chrysemys_picta_bellii
ENSONIG00000016129	polr3a	99	69.020	ENSCSAVG00000009925	-	99	69.020	Ciona_savignyi
ENSONIG00000016129	polr3a	86	85.743	ENSCANG00000041071	POLR3A	98	91.139	Colobus_angolensis_palliatus
ENSONIG00000016129	polr3a	78	90.312	ENSCGRG00001015599	-	92	90.312	Cricetulus_griseus_chok1gshd
ENSONIG00000016129	polr3a	88	89.052	ENSCGRG00000001019	Polr3a	100	89.052	Cricetulus_griseus_crigri
ENSONIG00000016129	polr3a	100	95.755	ENSCSEG00000016653	polr3a	100	95.755	Cynoglossus_semilaevis
ENSONIG00000016129	polr3a	100	96.187	ENSCVAG00000023049	polr3a	100	96.187	Cyprinodon_variegatus
ENSONIG00000016129	polr3a	99	92.291	ENSDARG00000102569	polr3a	99	92.291	Danio_rerio
ENSONIG00000016129	polr3a	100	88.993	ENSDNOG00000010194	POLR3A	100	88.993	Dasypus_novemcinctus
ENSONIG00000016129	polr3a	100	89.928	ENSDORG00000000184	Polr3a	100	89.928	Dipodomys_ordii
ENSONIG00000016129	polr3a	99	56.874	FBgn0030687	CG17209	99	56.874	Drosophila_melanogaster
ENSONIG00000016129	polr3a	88	89.474	ENSETEG00000007477	POLR3A	89	89.474	Echinops_telfairi
ENSONIG00000016129	polr3a	59	76.084	ENSEBUG00000013761	polr3a	98	76.084	Eptatretus_burgeri
ENSONIG00000016129	polr3a	100	89.928	ENSEASG00005023053	POLR3A	100	89.928	Equus_asinus_asinus
ENSONIG00000016129	polr3a	97	90.015	ENSECAG00000019416	POLR3A	100	89.720	Equus_caballus
ENSONIG00000016129	polr3a	96	85.459	ENSEEUG00000001774	POLR3A	100	85.459	Erinaceus_europaeus
ENSONIG00000016129	polr3a	100	91.457	ENSELUG00000014016	polr3a	100	91.457	Esox_lucius
ENSONIG00000016129	polr3a	100	90.072	ENSFCAG00000000843	POLR3A	100	90.072	Felis_catus
ENSONIG00000016129	polr3a	100	90.151	ENSFALG00000006913	POLR3A	100	90.151	Ficedula_albicollis
ENSONIG00000016129	polr3a	100	89.856	ENSFDAG00000007813	POLR3A	100	89.856	Fukomys_damarensis
ENSONIG00000016129	polr3a	95	95.263	ENSFHEG00000011922	polr3a	99	95.263	Fundulus_heteroclitus
ENSONIG00000016129	polr3a	100	88.285	ENSGMOG00000000291	polr3a	99	88.285	Gadus_morhua
ENSONIG00000016129	polr3a	100	90.647	ENSGALG00000004947	POLR3A	100	90.647	Gallus_gallus
ENSONIG00000016129	polr3a	100	95.683	ENSGAFG00000005112	polr3a	100	95.683	Gambusia_affinis
ENSONIG00000016129	polr3a	100	95.468	ENSGACG00000002304	polr3a	100	95.468	Gasterosteus_aculeatus
ENSONIG00000016129	polr3a	95	90.462	ENSGAGG00000010386	POLR3A	98	90.462	Gopherus_agassizii
ENSONIG00000016129	polr3a	99	88.873	ENSGGOG00000027729	POLR3A	100	90.979	Gorilla_gorilla
ENSONIG00000016129	polr3a	100	99.424	ENSHBUG00000018098	polr3a	100	99.424	Haplochromis_burtoni
ENSONIG00000016129	polr3a	100	89.856	ENSHGLG00000017899	POLR3A	100	89.856	Heterocephalus_glaber_female
ENSONIG00000016129	polr3a	100	89.856	ENSHGLG00100008483	POLR3A	100	89.856	Heterocephalus_glaber_male
ENSONIG00000016129	polr3a	100	94.964	ENSHCOG00000001075	polr3a	100	94.964	Hippocampus_comes
ENSONIG00000016129	polr3a	100	89.856	ENSSTOG00000012983	POLR3A	100	89.856	Ictidomys_tridecemlineatus
ENSONIG00000016129	polr3a	100	95.827	ENSKMAG00000015290	polr3a	100	95.827	Kryptolebias_marmoratus
ENSONIG00000016129	polr3a	99	94.456	ENSLBEG00000017214	polr3a	99	94.456	Labrus_bergylta
ENSONIG00000016129	polr3a	97	88.178	ENSLACG00000018557	POLR3A	99	88.178	Latimeria_chalumnae
ENSONIG00000016129	polr3a	100	92.606	ENSLOCG00000004942	polr3a	100	92.606	Lepisosteus_oculatus
ENSONIG00000016129	polr3a	100	88.569	ENSLAFG00000016719	POLR3A	100	88.569	Loxodonta_africana
ENSONIG00000016129	polr3a	100	89.928	ENSMFAG00000032218	POLR3A	100	89.928	Macaca_fascicularis
ENSONIG00000016129	polr3a	100	89.928	ENSMMUG00000005514	POLR3A	100	89.928	Macaca_mulatta
ENSONIG00000016129	polr3a	99	83.631	ENSMNEG00000035163	POLR3A	99	89.591	Macaca_nemestrina
ENSONIG00000016129	polr3a	100	86.403	ENSMLEG00000030014	POLR3A	98	91.772	Mandrillus_leucophaeus
ENSONIG00000016129	polr3a	100	96.835	ENSMAMG00000017497	polr3a	100	96.835	Mastacembelus_armatus
ENSONIG00000016129	polr3a	100	99.424	ENSMZEG00005000576	polr3a	100	99.424	Maylandia_zebra
ENSONIG00000016129	polr3a	100	73.224	ENSMGAG00000005713	-	100	73.224	Meleagris_gallopavo
ENSONIG00000016129	polr3a	100	87.626	ENSMAUG00000016247	Polr3a	100	87.626	Mesocricetus_auratus
ENSONIG00000016129	polr3a	100	90.000	ENSMICG00000005937	POLR3A	100	91.051	Microcebus_murinus
ENSONIG00000016129	polr3a	100	89.856	ENSMOCG00000012185	Polr3a	100	89.856	Microtus_ochrogaster
ENSONIG00000016129	polr3a	100	95.971	ENSMMOG00000013822	polr3a	100	95.971	Mola_mola
ENSONIG00000016129	polr3a	100	89.928	ENSMODG00000001036	POLR3A	100	89.928	Monodelphis_domestica
ENSONIG00000016129	polr3a	100	96.403	ENSMALG00000001249	polr3a	100	96.403	Monopterus_albus
ENSONIG00000016129	polr3a	100	89.784	MGP_CAROLIEiJ_G0019016	Polr3a	100	89.784	Mus_caroli
ENSONIG00000016129	polr3a	100	89.856	ENSMUSG00000025280	Polr3a	100	89.856	Mus_musculus
ENSONIG00000016129	polr3a	100	89.784	MGP_PahariEiJ_G0030029	Polr3a	100	89.784	Mus_pahari
ENSONIG00000016129	polr3a	100	87.194	MGP_SPRETEiJ_G0019894	Polr3a	97	95.050	Mus_spretus
ENSONIG00000016129	polr3a	100	89.301	ENSMPUG00000003790	POLR3A	100	89.301	Mustela_putorius_furo
ENSONIG00000016129	polr3a	100	88.777	ENSMLUG00000011522	POLR3A	100	88.777	Myotis_lucifugus
ENSONIG00000016129	polr3a	100	88.417	ENSNGAG00000015863	Polr3a	100	88.417	Nannospalax_galili
ENSONIG00000016129	polr3a	100	96.978	ENSNBRG00000014262	polr3a	100	96.978	Neolamprologus_brichardi
ENSONIG00000016129	polr3a	88	83.434	ENSNLEG00000010501	POLR3A	92	83.434	Nomascus_leucogenys
ENSONIG00000016129	polr3a	99	77.382	ENSMEUG00000012446	POLR3A	100	77.382	Notamacropus_eugenii
ENSONIG00000016129	polr3a	100	85.108	ENSOPRG00000001880	-	100	85.108	Ochotona_princeps
ENSONIG00000016129	polr3a	100	89.281	ENSODEG00000015146	POLR3A	100	89.281	Octodon_degus
ENSONIG00000016129	polr3a	98	89.335	ENSOANG00000007013	POLR3A	100	89.335	Ornithorhynchus_anatinus
ENSONIG00000016129	polr3a	100	89.496	ENSOCUG00000012450	POLR3A	100	89.496	Oryctolagus_cuniculus
ENSONIG00000016129	polr3a	100	95.971	ENSORLG00000008958	polr3a	100	95.971	Oryzias_latipes
ENSONIG00000016129	polr3a	100	93.669	ENSORLG00020007525	polr3a	98	96.349	Oryzias_latipes_hni
ENSONIG00000016129	polr3a	100	95.971	ENSORLG00015006633	polr3a	100	95.971	Oryzias_latipes_hsok
ENSONIG00000016129	polr3a	100	95.324	ENSOMEG00000012865	polr3a	100	95.324	Oryzias_melastigma
ENSONIG00000016129	polr3a	100	89.712	ENSOGAG00000010995	POLR3A	100	89.712	Otolemur_garnettii
ENSONIG00000016129	polr3a	100	89.727	ENSOARG00000009656	POLR3A	100	89.727	Ovis_aries
ENSONIG00000016129	polr3a	100	90.072	ENSPPRG00000002128	POLR3A	100	90.072	Panthera_pardus
ENSONIG00000016129	polr3a	100	90.072	ENSPTIG00000020916	POLR3A	100	90.072	Panthera_tigris_altaica
ENSONIG00000016129	polr3a	100	90.072	ENSPTRG00000002664	POLR3A	100	90.072	Pan_troglodytes
ENSONIG00000016129	polr3a	100	89.928	ENSPANG00000022508	POLR3A	100	89.928	Papio_anubis
ENSONIG00000016129	polr3a	100	93.094	ENSPKIG00000008140	polr3a	100	93.094	Paramormyrops_kingsleyae
ENSONIG00000016129	polr3a	98	90.431	ENSPSIG00000002092	POLR3A	100	90.431	Pelodiscus_sinensis
ENSONIG00000016129	polr3a	100	89.568	ENSPEMG00000006768	Polr3a	100	89.568	Peromyscus_maniculatus_bairdii
ENSONIG00000016129	polr3a	100	89.928	ENSPCIG00000015842	POLR3A	100	89.928	Phascolarctos_cinereus
ENSONIG00000016129	polr3a	54	96.376	ENSPFOG00000006458	polr3a	100	96.376	Poecilia_formosa
ENSONIG00000016129	polr3a	100	96.115	ENSPLAG00000000997	polr3a	100	96.115	Poecilia_latipinna
ENSONIG00000016129	polr3a	100	96.043	ENSPMEG00000006821	polr3a	100	96.043	Poecilia_mexicana
ENSONIG00000016129	polr3a	100	95.971	ENSPREG00000002385	polr3a	100	95.971	Poecilia_reticulata
ENSONIG00000016129	polr3a	93	89.775	ENSPPYG00000002305	POLR3A	99	89.775	Pongo_abelii
ENSONIG00000016129	polr3a	84	78.244	ENSPCAG00000005690	POLR3A	87	78.244	Procavia_capensis
ENSONIG00000016129	polr3a	100	89.856	ENSPCOG00000028311	POLR3A	100	89.856	Propithecus_coquereli
ENSONIG00000016129	polr3a	100	88.561	ENSPVAG00000015553	POLR3A	100	88.561	Pteropus_vampyrus
ENSONIG00000016129	polr3a	100	99.424	ENSPNYG00000020987	polr3a	100	99.424	Pundamilia_nyererei
ENSONIG00000016129	polr3a	99	89.049	ENSPNAG00000006629	polr3a	99	89.049	Pygocentrus_nattereri
ENSONIG00000016129	polr3a	100	89.712	ENSRNOG00000010008	Polr3a	100	89.712	Rattus_norvegicus
ENSONIG00000016129	polr3a	100	86.475	ENSRBIG00000034967	POLR3A	98	91.772	Rhinopithecus_bieti
ENSONIG00000016129	polr3a	100	89.928	ENSRROG00000025527	POLR3A	100	89.928	Rhinopithecus_roxellana
ENSONIG00000016129	polr3a	97	49.965	YOR116C	RPO31	98	49.965	Saccharomyces_cerevisiae
ENSONIG00000016129	polr3a	100	89.928	ENSSBOG00000022199	POLR3A	100	89.928	Saimiri_boliviensis_boliviensis
ENSONIG00000016129	polr3a	100	89.856	ENSSHAG00000007588	POLR3A	94	89.856	Sarcophilus_harrisii
ENSONIG00000016129	polr3a	100	93.597	ENSSFOG00015014357	polr3a	100	93.597	Scleropages_formosus
ENSONIG00000016129	polr3a	100	96.043	ENSSMAG00000001780	polr3a	100	96.043	Scophthalmus_maximus
ENSONIG00000016129	polr3a	100	97.050	ENSSDUG00000019840	polr3a	100	97.050	Seriola_dumerili
ENSONIG00000016129	polr3a	100	97.050	ENSSLDG00000023908	polr3a	100	97.050	Seriola_lalandi_dorsalis
ENSONIG00000016129	polr3a	69	89.028	ENSSARG00000009916	POLR3A	89	89.028	Sorex_araneus
ENSONIG00000016129	polr3a	100	88.129	ENSSPUG00000013209	POLR3A	100	88.129	Sphenodon_punctatus
ENSONIG00000016129	polr3a	100	96.978	ENSSPAG00000017712	polr3a	100	96.978	Stegastes_partitus
ENSONIG00000016129	polr3a	100	89.856	ENSSSCG00000010327	POLR3A	100	89.856	Sus_scrofa
ENSONIG00000016129	polr3a	100	90.288	ENSTGUG00000006423	-	100	90.288	Taeniopygia_guttata
ENSONIG00000016129	polr3a	100	95.683	ENSTRUG00000013488	polr3a	100	95.683	Takifugu_rubripes
ENSONIG00000016129	polr3a	100	95.474	ENSTNIG00000013151	polr3a	100	95.474	Tetraodon_nigroviridis
ENSONIG00000016129	polr3a	71	90.426	ENSTBEG00000015288	POLR3A	75	90.426	Tupaia_belangeri
ENSONIG00000016129	polr3a	100	83.237	ENSTTRG00000007817	POLR3A	100	83.237	Tursiops_truncatus
ENSONIG00000016129	polr3a	100	87.554	ENSUAMG00000011283	POLR3A	100	87.554	Ursus_americanus
ENSONIG00000016129	polr3a	100	89.928	ENSUMAG00000013913	POLR3A	100	89.928	Ursus_maritimus
ENSONIG00000016129	polr3a	99	81.964	ENSVPAG00000003285	POLR3A	100	81.964	Vicugna_pacos
ENSONIG00000016129	polr3a	100	89.856	ENSVVUG00000025523	POLR3A	100	89.856	Vulpes_vulpes
ENSONIG00000016129	polr3a	86	90.476	ENSXETG00000018101	polr3a	100	90.476	Xenopus_tropicalis
ENSONIG00000016129	polr3a	100	95.971	ENSXMAG00000015213	polr3a	100	95.971	Xiphophorus_maculatus