EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: ENSONIG00000016279 (Gene tree)
Gene ID: 100706267
Gene Symbol: -
Alias: -
Full Name: ras-related protein Rab-5C
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Plus strand
Length: 5979 bases
Position: chrGL831148.1:4186589-4192567
Accession: 100706267
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000020495	MMR_HSR1	PF01926.23	0.00011	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000020513	-	1458	-	ENSONIP00000020495	222 (aa)	XP_003441886	I3KHA0

Gene Model

Click here to download ENSONIG00000016279's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000016279's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSONIG00000016279	-	77	33.889	ENSONIG00000003367	-	87	33.889
ENSONIG00000016279	-	88	41.837	ENSONIG00000002065	rab1ba	95	41.837
ENSONIG00000016279	-	91	41.872	ENSONIG00000018673	rab18b	95	41.872
ENSONIG00000016279	-	76	42.262	ENSONIG00000016622	rab2a	79	42.262
ENSONIG00000016279	-	72	39.623	ENSONIG00000011542	-	98	39.623
ENSONIG00000016279	-	69	38.961	ENSONIG00000012069	RAB15	73	38.961
ENSONIG00000016279	-	75	39.181	ENSONIG00000006715	-	73	39.181
ENSONIG00000016279	-	88	41.327	ENSONIG00000002284	rab25b	94	41.327
ENSONIG00000016279	-	90	41.463	ENSONIG00000002281	rab11al	95	41.463
ENSONIG00000016279	-	74	37.349	ENSONIG00000008545	RAB39B	78	37.349
ENSONIG00000016279	-	75	42.442	ENSONIG00000020336	RAB7A	82	42.941
ENSONIG00000016279	-	88	39.487	ENSONIG00000006340	rab13	95	39.487
ENSONIG00000016279	-	80	41.011	ENSONIG00000000558	-	83	41.011
ENSONIG00000016279	-	73	39.752	ENSONIG00000005781	rab15	76	39.752
ENSONIG00000016279	-	73	47.239	ENSONIG00000015072	RAB11A	76	47.239
ENSONIG00000016279	-	79	42.308	ENSONIG00000003725	rab18a	89	42.308
ENSONIG00000016279	-	53	30.328	ENSONIG00000014667	arl8a	61	30.328
ENSONIG00000016279	-	75	40.719	ENSONIG00000009443	si:dkey-16l2.16	74	43.590
ENSONIG00000016279	-	75	46.707	ENSONIG00000002544	-	75	47.239
ENSONIG00000016279	-	73	47.239	ENSONIG00000010435	rab11bb	75	47.239
ENSONIG00000016279	-	73	47.239	ENSONIG00000002535	rab11ba	74	47.826
ENSONIG00000016279	-	100	88.739	ENSONIG00000001113	rab5c	94	90.338
ENSONIG00000016279	-	88	37.755	ENSONIG00000015990	rab35b	96	37.755
ENSONIG00000016279	-	74	32.121	ENSONIG00000014717	kras	90	30.994
ENSONIG00000016279	-	74	42.941	ENSONIG00000019036	-	82	42.941
ENSONIG00000016279	-	76	35.028	ENSONIG00000020675	rab9a	85	34.463
ENSONIG00000016279	-	74	47.337	ENSONIG00000002410	rab25a	80	47.337
ENSONIG00000016279	-	77	42.775	ENSONIG00000002774	RAB41	80	43.195
ENSONIG00000016279	-	65	32.877	ENSONIG00000009978	si:cabz01085950.1	72	32.877
ENSONIG00000016279	-	94	31.776	ENSONIG00000014885	rabl2	83	32.812
ENSONIG00000016279	-	60	30.282	ENSONIG00000020279	arl8bb	73	30.282
ENSONIG00000016279	-	75	44.311	ENSONIG00000005708	rab30	82	44.311
ENSONIG00000016279	-	85	39.153	ENSONIG00000014099	rab14	87	39.153
ENSONIG00000016279	-	75	37.989	ENSONIG00000011559	rab33ba	75	37.989
ENSONIG00000016279	-	78	50.286	ENSONIG00000016776	RAB17	91	52.121
ENSONIG00000016279	-	87	39.487	ENSONIG00000016851	-	84	39.487
ENSONIG00000016279	-	75	37.500	ENSONIG00000018469	rab12	69	38.690
ENSONIG00000016279	-	88	33.663	ENSONIG00000020945	-	97	34.158
ENSONIG00000016279	-	72	34.756	ENSONIG00000020296	si:dkey-13a21.4	80	34.756
ENSONIG00000016279	-	75	36.000	ENSONIG00000020581	rab9b	85	36.000
ENSONIG00000016279	-	88	43.655	ENSONIG00000006819	-	95	43.655
ENSONIG00000016279	-	73	34.132	ENSONIG00000014892	RAB29	80	34.132
ENSONIG00000016279	-	78	31.844	ENSONIG00000014560	hrasb	94	31.844
ENSONIG00000016279	-	99	82.192	ENSONIG00000002425	rab5aa	93	84.236
ENSONIG00000016279	-	71	31.875	ENSONIG00000005519	rab34b	62	31.875
ENSONIG00000016279	-	89	49.239	ENSONIG00000006876	rab22a	97	49.239
ENSONIG00000016279	-	72	35.000	ENSONIG00000009749	rab23	72	36.047
ENSONIG00000016279	-	53	30.328	ENSONIG00000004057	arl8ba	62	30.328
ENSONIG00000016279	-	69	32.468	ENSONIG00000018503	rheb	83	32.468
ENSONIG00000016279	-	73	38.554	ENSONIG00000015828	rab33a	59	38.554
ENSONIG00000016279	-	91	39.706	ENSONIG00000009886	rab6bb	96	40.000
ENSONIG00000016279	-	90	39.500	ENSONIG00000004394	rab6a	96	39.303
ENSONIG00000016279	-	74	36.145	ENSONIG00000006997	-	77	36.585