EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSONIG00000016294 (Gene tree)
Gene ID: -
Gene Symbol: RBM20
Alias: -
Full Name: RNA binding motif protein 20
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Minus strand
Length: 26828 bases
Position: chrGL831216.1:1402601-1429428
Accession: 27424
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000020513	zf-met	PF12874.7	0.00011	1	1
ENSONIP00000020514	zf-met	PF12874.7	0.00033	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000020530	RBM20-201	4306	-	ENSONIP00000020512	435 (aa)	-	I3KHB7
ENSONIT00000020531	RBM20-202	3540	-	ENSONIP00000020513	1064 (aa)	-	I3KHB8
ENSONIT00000020532	RBM20-203	2778	-	ENSONIP00000020514	810 (aa)	-	I3KHB9

Gene Model

Click here to download ENSONIG00000016294's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000016294's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000016294	RBM20	98	70.588	ENSAPOG00000011327	RBM20	99	67.136	Acanthochromis_polyacanthus
ENSONIG00000016294	RBM20	99	75.887	ENSACIG00000016368	RBM20	99	73.433	Amphilophus_citrinellus
ENSONIG00000016294	RBM20	98	73.109	ENSAOCG00000018378	RBM20	92	72.181	Amphiprion_ocellaris
ENSONIG00000016294	RBM20	83	87.037	ENSATEG00000008782	RBM20	96	87.037	Anabas_testudineus
ENSONIG00000016294	RBM20	100	89.086	ENSACLG00000025652	RBM20	96	89.086	Astatotilapia_calliptera
ENSONIG00000016294	RBM20	99	54.235	ENSELUG00000022906	RBM20	94	51.669	Esox_lucius
ENSONIG00000016294	RBM20	100	88.619	ENSHBUG00000016743	RBM20	95	88.619	Haplochromis_burtoni
ENSONIG00000016294	RBM20	100	64.328	ENSKMAG00000020318	RBM20	94	63.729	Kryptolebias_marmoratus
ENSONIG00000016294	RBM20	99	38.773	ENSLACG00000012822	RBM20	96	36.955	Latimeria_chalumnae
ENSONIG00000016294	RBM20	99	68.639	ENSMAMG00000014492	RBM20	94	67.225	Mastacembelus_armatus
ENSONIG00000016294	RBM20	100	89.179	ENSMZEG00005003037	RBM20	92	89.179	Maylandia_zebra
ENSONIG00000016294	RBM20	98	64.988	ENSMMOG00000021599	RBM20	97	62.946	Mola_mola
ENSONIG00000016294	RBM20	86	75.362	ENSMODG00000010399	RBM20	74	75.362	Monodelphis_domestica
ENSONIG00000016294	RBM20	99	88.078	ENSNBRG00000003302	RBM20	93	88.479	Neolamprologus_brichardi
ENSONIG00000016294	RBM20	99	50.235	ENSPKIG00000017337	RBM20	96	46.858	Paramormyrops_kingsleyae
ENSONIG00000016294	RBM20	100	88.993	ENSPNYG00000002118	RBM20	95	88.993	Pundamilia_nyererei
ENSONIG00000016294	RBM20	99	70.755	ENSSMAG00000001397	RBM20	92	68.498	Scophthalmus_maximus
ENSONIG00000016294	RBM20	100	73.467	ENSSDUG00000010084	RBM20	93	71.245	Seriola_dumerili
ENSONIG00000016294	RBM20	99	73.254	ENSSLDG00000012344	RBM20	92	71.548	Seriola_lalandi_dorsalis
ENSONIG00000016294	RBM20	98	73.373	ENSSPAG00000005114	RBM20	92	72.525	Stegastes_partitus