EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSONIG00000016445 (Gene tree)
Gene ID: 100695360
Gene Symbol: pop1
Alias: -
Full Name: POP1 homolog%2C ribonuclease P/MRP subunit
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Plus strand
Length: 15447 bases
Position: chrGL831539.1:330089-345535
Accession: 100695360
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000020713	POP1	PF06978.11	7.7e-36	1	2
ENSONIP00000020713	POP1	PF06978.11	7.7e-36	2	2
ENSONIP00000020714	POP1	PF06978.11	1.1e-35	1	2
ENSONIP00000020714	POP1	PF06978.11	1.1e-35	2	2
ENSONIP00000020713	POPLD	PF08170.12	1.1e-27	1	1
ENSONIP00000020714	POPLD	PF08170.12	1.3e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000020732	-	3090	-	ENSONIP00000020714	1029 (aa)	-	I3KHW9
ENSONIT00000020731	-	7683	-	ENSONIP00000020713	982 (aa)	XP_005464976	I3KHW8

Gene Model

Click here to download ENSONIG00000016445's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000016445's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000016445	pop1	100	48.393	ENSG00000104356	POP1	100	48.433	Homo_sapiens
ENSONIG00000016445	pop1	100	81.067	ENSAPOG00000008198	pop1	100	81.067	Acanthochromis_polyacanthus
ENSONIG00000016445	pop1	100	48.000	ENSAMEG00000000556	POP1	100	48.000	Ailuropoda_melanoleuca
ENSONIG00000016445	pop1	100	83.603	ENSACIG00000004169	POP1	100	82.626	Amphilophus_citrinellus
ENSONIG00000016445	pop1	100	80.645	ENSAOCG00000010991	pop1	100	80.746	Amphiprion_ocellaris
ENSONIG00000016445	pop1	100	72.239	ENSAPEG00000007607	pop1	100	71.841	Amphiprion_percula
ENSONIG00000016445	pop1	100	76.096	ENSATEG00000024814	POP1	100	76.523	Anabas_testudineus
ENSONIG00000016445	pop1	93	49.584	ENSAPLG00000014418	POP1	99	49.843	Anas_platyrhynchos
ENSONIG00000016445	pop1	100	46.023	ENSACAG00000016083	POP1	100	46.023	Anolis_carolinensis
ENSONIG00000016445	pop1	87	55.689	ENSANAG00000026360	POP1	99	55.689	Aotus_nancymaae
ENSONIG00000016445	pop1	100	96.843	ENSACLG00000010951	pop1	100	96.843	Astatotilapia_calliptera
ENSONIG00000016445	pop1	100	58.112	ENSAMXG00000014483	POP1	100	58.268	Astyanax_mexicanus
ENSONIG00000016445	pop1	100	48.910	ENSBTAG00000012596	POP1	100	49.146	Bos_taurus
ENSONIG00000016445	pop1	75	31.890	WBGene00015486	C05D11.9	89	34.434	Caenorhabditis_elegans
ENSONIG00000016445	pop1	100	47.943	ENSCJAG00000015567	POP1	100	48.138	Callithrix_jacchus
ENSONIG00000016445	pop1	100	48.577	ENSCAFG00000000469	POP1	100	48.577	Canis_familiaris
ENSONIG00000016445	pop1	100	47.519	ENSCAFG00020026765	POP1	100	47.839	Canis_lupus_dingo
ENSONIG00000016445	pop1	100	47.751	ENSCHIG00000017066	POP1	100	48.560	Capra_hircus
ENSONIG00000016445	pop1	100	47.974	ENSTSYG00000003097	POP1	100	48.068	Carlito_syrichta
ENSONIG00000016445	pop1	100	47.254	ENSCAPG00000007251	POP1	100	47.433	Cavia_aperea
ENSONIG00000016445	pop1	100	48.628	ENSCPOG00000002901	POP1	100	48.808	Cavia_porcellus
ENSONIG00000016445	pop1	100	48.180	ENSCCAG00000018939	POP1	100	48.084	Cebus_capucinus
ENSONIG00000016445	pop1	100	48.197	ENSCATG00000040916	POP1	100	48.197	Cercocebus_atys
ENSONIG00000016445	pop1	100	49.284	ENSCLAG00000007208	POP1	97	49.284	Chinchilla_lanigera
ENSONIG00000016445	pop1	90	50.951	ENSCSAG00000012340	POP1	98	50.748	Chlorocebus_sabaeus
ENSONIG00000016445	pop1	95	47.262	ENSCHOG00000011432	POP1	98	47.614	Choloepus_hoffmanni
ENSONIG00000016445	pop1	100	50.144	ENSCPBG00000006373	POP1	100	50.533	Chrysemys_picta_bellii
ENSONIG00000016445	pop1	82	36.437	ENSCING00000008323	-	89	36.032	Ciona_intestinalis
ENSONIG00000016445	pop1	100	48.004	ENSCANG00000001647	POP1	100	48.004	Colobus_angolensis_palliatus
ENSONIG00000016445	pop1	100	47.358	ENSCGRG00001017308	Pop1	100	47.368	Cricetulus_griseus_chok1gshd
ENSONIG00000016445	pop1	100	44.206	ENSCGRG00000010824	Pop1	100	44.596	Cricetulus_griseus_crigri
ENSONIG00000016445	pop1	100	71.501	ENSCSEG00000008737	POP1	100	71.501	Cynoglossus_semilaevis
ENSONIG00000016445	pop1	100	72.746	ENSCVAG00000022248	pop1	100	72.746	Cyprinodon_variegatus
ENSONIG00000016445	pop1	53	54.651	ENSDARG00000102087	pop1	98	53.682	Danio_rerio
ENSONIG00000016445	pop1	100	45.749	ENSDNOG00000019974	POP1	100	45.588	Dasypus_novemcinctus
ENSONIG00000016445	pop1	100	42.938	ENSDORG00000015384	Pop1	100	43.264	Dipodomys_ordii
ENSONIG00000016445	pop1	64	34.009	FBgn0026702	l(1)G0045	98	30.064	Drosophila_melanogaster
ENSONIG00000016445	pop1	89	48.129	ENSETEG00000007839	POP1	88	48.276	Echinops_telfairi
ENSONIG00000016445	pop1	100	48.230	ENSEASG00005003189	POP1	98	48.134	Equus_asinus_asinus
ENSONIG00000016445	pop1	100	48.282	ENSECAG00000024236	POP1	100	48.049	Equus_caballus
ENSONIG00000016445	pop1	51	75.325	ENSEEUG00000003050	-	53	80.303	Erinaceus_europaeus
ENSONIG00000016445	pop1	100	62.978	ENSELUG00000003526	pop1	100	63.280	Esox_lucius
ENSONIG00000016445	pop1	100	47.760	ENSFCAG00000002168	POP1	100	47.810	Felis_catus
ENSONIG00000016445	pop1	100	47.394	ENSFALG00000005711	POP1	100	48.263	Ficedula_albicollis
ENSONIG00000016445	pop1	100	47.020	ENSFDAG00000017068	POP1	100	47.760	Fukomys_damarensis
ENSONIG00000016445	pop1	100	72.910	ENSFHEG00000019518	pop1	100	72.709	Fundulus_heteroclitus
ENSONIG00000016445	pop1	100	61.847	ENSGMOG00000000659	POP1	100	62.059	Gadus_morhua
ENSONIG00000016445	pop1	100	71.774	ENSGAFG00000019770	POP1	100	71.472	Gambusia_affinis
ENSONIG00000016445	pop1	100	68.715	ENSGACG00000003499	pop1	100	68.715	Gasterosteus_aculeatus
ENSONIG00000016445	pop1	100	49.238	ENSGAGG00000011737	POP1	98	49.473	Gopherus_agassizii
ENSONIG00000016445	pop1	100	48.299	ENSGGOG00000003176	POP1	100	48.427	Gorilla_gorilla
ENSONIG00000016445	pop1	100	97.352	ENSHBUG00000021583	pop1	100	97.352	Haplochromis_burtoni
ENSONIG00000016445	pop1	100	48.106	ENSHGLG00000006029	POP1	100	48.201	Heterocephalus_glaber_female
ENSONIG00000016445	pop1	100	48.106	ENSHGLG00100016879	POP1	100	48.201	Heterocephalus_glaber_male
ENSONIG00000016445	pop1	100	64.833	ENSHCOG00000013888	pop1	95	67.686	Hippocampus_comes
ENSONIG00000016445	pop1	99	56.098	ENSIPUG00000018336	pop1	100	55.750	Ictalurus_punctatus
ENSONIG00000016445	pop1	100	48.390	ENSSTOG00000011455	POP1	97	48.569	Ictidomys_tridecemlineatus
ENSONIG00000016445	pop1	100	47.893	ENSJJAG00000013325	Pop1	100	48.180	Jaculus_jaculus
ENSONIG00000016445	pop1	100	75.153	ENSKMAG00000001346	POP1	100	75.153	Kryptolebias_marmoratus
ENSONIG00000016445	pop1	100	66.667	ENSLBEG00000024457	POP1	100	66.062	Labrus_bergylta
ENSONIG00000016445	pop1	92	51.742	ENSLACG00000012498	POP1	98	51.829	Latimeria_chalumnae
ENSONIG00000016445	pop1	100	55.728	ENSLOCG00000009817	POP1	100	56.050	Lepisosteus_oculatus
ENSONIG00000016445	pop1	100	48.571	ENSLAFG00000010770	POP1	100	48.571	Loxodonta_africana
ENSONIG00000016445	pop1	100	48.292	ENSMFAG00000000347	POP1	100	48.292	Macaca_fascicularis
ENSONIG00000016445	pop1	100	48.436	ENSMNEG00000036870	POP1	100	48.436	Macaca_nemestrina
ENSONIG00000016445	pop1	100	48.292	ENSMLEG00000034986	POP1	100	48.292	Mandrillus_leucophaeus
ENSONIG00000016445	pop1	100	76.838	ENSMAMG00000004040	pop1	100	76.334	Mastacembelus_armatus
ENSONIG00000016445	pop1	100	97.047	ENSMZEG00005025448	pop1	100	97.047	Maylandia_zebra
ENSONIG00000016445	pop1	100	47.314	ENSMGAG00000012167	POP1	100	47.383	Meleagris_gallopavo
ENSONIG00000016445	pop1	100	48.038	ENSMAUG00000017537	Pop1	100	47.943	Mesocricetus_auratus
ENSONIG00000016445	pop1	100	47.830	ENSMICG00000004361	POP1	100	47.570	Microcebus_murinus
ENSONIG00000016445	pop1	100	47.615	ENSMOCG00000006356	Pop1	100	47.805	Microtus_ochrogaster
ENSONIG00000016445	pop1	100	66.667	ENSMMOG00000018242	pop1	100	66.868	Mola_mola
ENSONIG00000016445	pop1	100	47.274	ENSMODG00000006561	POP1	100	47.097	Monodelphis_domestica
ENSONIG00000016445	pop1	100	76.215	ENSMALG00000012621	POP1	100	76.215	Monopterus_albus
ENSONIG00000016445	pop1	100	46.968	MGP_CAROLIEiJ_G0019726	Pop1	100	46.974	Mus_caroli
ENSONIG00000016445	pop1	100	47.064	ENSMUSG00000022325	Pop1	100	47.198	Mus_musculus
ENSONIG00000016445	pop1	100	47.383	MGP_PahariEiJ_G0019735	Pop1	100	47.198	Mus_pahari
ENSONIG00000016445	pop1	100	47.198	MGP_SPRETEiJ_G0020622	Pop1	100	47.388	Mus_spretus
ENSONIG00000016445	pop1	100	49.144	ENSMPUG00000015250	POP1	100	48.857	Mustela_putorius_furo
ENSONIG00000016445	pop1	100	46.059	ENSMLUG00000010204	POP1	100	45.956	Myotis_lucifugus
ENSONIG00000016445	pop1	100	48.335	ENSNGAG00000001582	Pop1	100	48.802	Nannospalax_galili
ENSONIG00000016445	pop1	100	86.714	ENSNBRG00000002356	pop1	100	86.714	Neolamprologus_brichardi
ENSONIG00000016445	pop1	100	48.102	ENSNLEG00000002541	POP1	100	48.250	Nomascus_leucogenys
ENSONIG00000016445	pop1	88	55.989	ENSMEUG00000003118	POP1	92	55.989	Notamacropus_eugenii
ENSONIG00000016445	pop1	100	48.566	ENSOPRG00000007667	POP1	100	48.713	Ochotona_princeps
ENSONIG00000016445	pop1	100	48.946	ENSODEG00000003984	POP1	100	49.282	Octodon_degus
ENSONIG00000016445	pop1	60	47.705	ENSOANG00000001278	-	94	47.705	Ornithorhynchus_anatinus
ENSONIG00000016445	pop1	97	52.575	ENSOCUG00000017400	POP1	100	47.677	Oryctolagus_cuniculus
ENSONIG00000016445	pop1	100	72.194	ENSORLG00000002839	pop1	100	72.194	Oryzias_latipes
ENSONIG00000016445	pop1	91	69.264	ENSORLG00020022450	POP1	100	64.961	Oryzias_latipes_hni
ENSONIG00000016445	pop1	100	72.626	ENSORLG00015012746	POP1	100	72.626	Oryzias_latipes_hsok
ENSONIG00000016445	pop1	100	71.023	ENSOMEG00000006915	pop1	99	71.023	Oryzias_melastigma
ENSONIG00000016445	pop1	100	47.524	ENSOGAG00000001466	POP1	100	47.847	Otolemur_garnettii
ENSONIG00000016445	pop1	100	48.393	ENSPPAG00000018410	POP1	100	48.338	Pan_paniscus
ENSONIG00000016445	pop1	100	47.692	ENSPPRG00000005002	POP1	100	47.743	Panthera_pardus
ENSONIG00000016445	pop1	100	47.788	ENSPTIG00000016527	POP1	100	47.839	Panthera_tigris_altaica
ENSONIG00000016445	pop1	100	48.488	ENSPTRG00000020458	POP1	100	48.433	Pan_troglodytes
ENSONIG00000016445	pop1	100	48.387	ENSPANG00000009704	POP1	100	48.387	Papio_anubis
ENSONIG00000016445	pop1	100	58.607	ENSPKIG00000016325	POP1	100	59.109	Paramormyrops_kingsleyae
ENSONIG00000016445	pop1	100	48.995	ENSPSIG00000012343	POP1	100	49.331	Pelodiscus_sinensis
ENSONIG00000016445	pop1	100	61.554	ENSPMGG00000022253	POP1	100	61.455	Periophthalmus_magnuspinnatus
ENSONIG00000016445	pop1	99	47.691	ENSPEMG00000023633	Pop1	100	47.502	Peromyscus_maniculatus_bairdii
ENSONIG00000016445	pop1	91	42.738	ENSPMAG00000003209	POP1	99	42.827	Petromyzon_marinus
ENSONIG00000016445	pop1	100	46.277	ENSPCIG00000012216	POP1	100	46.459	Phascolarctos_cinereus
ENSONIG00000016445	pop1	100	70.997	ENSPFOG00000012490	POP1	100	70.594	Poecilia_formosa
ENSONIG00000016445	pop1	100	70.796	ENSPLAG00000004646	POP1	100	70.292	Poecilia_latipinna
ENSONIG00000016445	pop1	100	71.443	ENSPMEG00000019592	POP1	100	71.010	Poecilia_mexicana
ENSONIG00000016445	pop1	100	70.955	ENSPREG00000020951	POP1	100	70.783	Poecilia_reticulata
ENSONIG00000016445	pop1	100	47.859	ENSPPYG00000018777	POP1	100	48.008	Pongo_abelii
ENSONIG00000016445	pop1	100	45.817	ENSPCAG00000016662	POP1	100	45.592	Procavia_capensis
ENSONIG00000016445	pop1	100	46.887	ENSPCOG00000019420	POP1	100	47.075	Propithecus_coquereli
ENSONIG00000016445	pop1	100	47.536	ENSPVAG00000014468	POP1	100	47.734	Pteropus_vampyrus
ENSONIG00000016445	pop1	100	89.206	ENSPNYG00000004476	pop1	100	89.206	Pundamilia_nyererei
ENSONIG00000016445	pop1	100	56.408	ENSPNAG00000000265	pop1	100	56.311	Pygocentrus_nattereri
ENSONIG00000016445	pop1	100	47.126	ENSRNOG00000005243	Pop1	100	47.126	Rattus_norvegicus
ENSONIG00000016445	pop1	100	48.110	ENSRBIG00000007996	POP1	100	48.110	Rhinopithecus_bieti
ENSONIG00000016445	pop1	100	48.289	ENSRROG00000012334	POP1	100	48.289	Rhinopithecus_roxellana
ENSONIG00000016445	pop1	99	47.876	ENSSBOG00000020830	POP1	100	47.876	Saimiri_boliviensis_boliviensis
ENSONIG00000016445	pop1	100	47.801	ENSSHAG00000000296	POP1	100	47.818	Sarcophilus_harrisii
ENSONIG00000016445	pop1	100	60.421	ENSSFOG00015007429	pop1	99	60.263	Scleropages_formosus
ENSONIG00000016445	pop1	100	72.110	ENSSMAG00000010467	POP1	100	71.935	Scophthalmus_maximus
ENSONIG00000016445	pop1	100	78.974	ENSSDUG00000007817	POP1	100	79.658	Seriola_dumerili
ENSONIG00000016445	pop1	100	79.435	ENSSLDG00000012565	POP1	100	80.161	Seriola_lalandi_dorsalis
ENSONIG00000016445	pop1	100	45.933	ENSSPUG00000003550	-	100	46.220	Sphenodon_punctatus
ENSONIG00000016445	pop1	100	74.428	ENSSPAG00000014955	pop1	100	74.229	Stegastes_partitus
ENSONIG00000016445	pop1	100	47.830	ENSSSCG00000006078	POP1	100	47.826	Sus_scrofa
ENSONIG00000016445	pop1	93	45.181	ENSTGUG00000012011	-	100	45.285	Taeniopygia_guttata
ENSONIG00000016445	pop1	100	67.169	ENSTRUG00000010856	pop1	100	66.700	Takifugu_rubripes
ENSONIG00000016445	pop1	95	69.247	ENSTNIG00000013297	pop1	100	70.052	Tetraodon_nigroviridis
ENSONIG00000016445	pop1	95	47.059	ENSTBEG00000014214	POP1	98	48.311	Tupaia_belangeri
ENSONIG00000016445	pop1	100	47.533	ENSTTRG00000016071	POP1	100	47.727	Tursiops_truncatus
ENSONIG00000016445	pop1	99	47.941	ENSUAMG00000017309	POP1	95	50.532	Ursus_americanus
ENSONIG00000016445	pop1	100	47.664	ENSUMAG00000016952	POP1	100	51.866	Ursus_maritimus
ENSONIG00000016445	pop1	86	52.650	ENSVPAG00000008278	POP1	82	53.025	Vicugna_pacos
ENSONIG00000016445	pop1	100	47.834	ENSVVUG00000010994	POP1	100	47.743	Vulpes_vulpes
ENSONIG00000016445	pop1	100	62.365	ENSXCOG00000017043	POP1	100	61.178	Xiphophorus_couchianus
ENSONIG00000016445	pop1	100	70.997	ENSXMAG00000002472	POP1	100	70.594	Xiphophorus_maculatus