EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSONIG00000016776 (Gene tree)
Gene ID: 100691311
Gene Symbol: RAB17
Alias: -
Full Name: ras-related protein Rab-17
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Minus strand
Length: 4598 bases
Position: chrGL831428.1:101673-106270
Accession: 100691311
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000021134	MMR_HSR1	PF01926.23	2.2e-05	1	1
ENSONIP00000021133	MMR_HSR1	PF01926.23	3.7e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000021153	RAB17-202	543	-	ENSONIP00000021134	181 (aa)	-	I3KJ39
ENSONIT00000021152	RAB17-201	1148	-	ENSONIP00000021133	227 (aa)	XP_005463382	I3KJ38

Gene Model

Click here to download ENSONIG00000016776's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000016776's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSONIG00000016776	RAB17	88	33.136	ENSONIG00000003367	-	84	31.373
ENSONIG00000016776	RAB17	72	30.935	ENSONIG00000021291	-	65	32.117
ENSONIG00000016776	RAB17	86	36.306	ENSONIG00000015990	rab35b	85	35.260
ENSONIG00000016776	RAB17	86	45.860	ENSONIG00000015072	RAB11A	81	42.697
ENSONIG00000016776	RAB17	89	33.333	ENSONIG00000014885	rabl2	84	31.937
ENSONIG00000016776	RAB17	86	36.943	ENSONIG00000002065	rab1ba	98	32.353
ENSONIG00000016776	RAB17	90	40.351	ENSONIG00000018673	rab18b	83	40.351
ENSONIG00000016776	RAB17	86	31.210	ENSONIG00000019066	rhebl1	85	31.210
ENSONIG00000016776	RAB17	64	31.967	ENSONIG00000003403	ARL4D	58	31.967
ENSONIG00000016776	RAB17	85	38.961	ENSONIG00000005708	rab30	95	34.673
ENSONIG00000016776	RAB17	70	30.435	ENSONIG00000007797	rras	79	30.435
ENSONIG00000016776	RAB17	72	31.159	ENSONIG00000021238	arl4d	65	31.159
ENSONIG00000016776	RAB17	91	52.121	ENSONIG00000002425	rab5aa	75	52.147
ENSONIG00000016776	RAB17	88	32.927	ENSONIG00000019036	-	81	32.738
ENSONIG00000016776	RAB17	82	32.886	ENSONIG00000009749	rab23	73	32.571
ENSONIG00000016776	RAB17	87	33.333	ENSONIG00000009008	dnajc27	61	33.939
ENSONIG00000016776	RAB17	88	30.723	ENSONIG00000014892	RAB29	81	30.952
ENSONIG00000016776	RAB17	86	45.860	ENSONIG00000010435	rab11bb	77	43.195
ENSONIG00000016776	RAB17	88	30.392	ENSONIG00000020581	rab9b	98	30.392
ENSONIG00000016776	RAB17	88	42.857	ENSONIG00000009886	rab6bb	76	42.857
ENSONIG00000016776	RAB17	93	41.176	ENSONIG00000014099	rab14	79	40.698
ENSONIG00000016776	RAB17	59	30.147	ENSONIG00000020477	arl4aa	67	30.147
ENSONIG00000016776	RAB17	86	42.038	ENSONIG00000018469	rab12	74	37.569
ENSONIG00000016776	RAB17	87	38.608	ENSONIG00000006819	-	99	34.314
ENSONIG00000016776	RAB17	82	38.667	ENSONIG00000009978	si:cabz01085950.1	74	38.926
ENSONIG00000016776	RAB17	85	31.613	ENSONIG00000018503	rheb	93	30.636
ENSONIG00000016776	RAB17	80	40.136	ENSONIG00000008545	RAB39B	78	37.349
ENSONIG00000016776	RAB17	86	46.497	ENSONIG00000002535	rab11ba	77	43.787
ENSONIG00000016776	RAB17	83	40.132	ENSONIG00000006997	-	78	37.349
ENSONIG00000016776	RAB17	87	36.478	ENSONIG00000011542	-	98	37.107
ENSONIG00000016776	RAB17	88	32.927	ENSONIG00000020336	RAB7A	81	32.738
ENSONIG00000016776	RAB17	86	35.256	ENSONIG00000009443	si:dkey-16l2.16	89	32.642
ENSONIG00000016776	RAB17	87	31.250	ENSONIG00000013175	rab34a	62	32.121
ENSONIG00000016776	RAB17	79	33.103	ENSONIG00000006715	-	73	30.994
ENSONIG00000016776	RAB17	86	48.408	ENSONIG00000002410	rab25a	74	48.408
ENSONIG00000016776	RAB17	77	30.496	ENSONIG00000014560	hrasb	84	30.435
ENSONIG00000016776	RAB17	83	40.132	ENSONIG00000005781	rab15	76	38.889
ENSONIG00000016776	RAB17	86	45.860	ENSONIG00000002544	-	77	43.195
ENSONIG00000016776	RAB17	83	40.789	ENSONIG00000006340	rab13	80	38.650
ENSONIG00000016776	RAB17	72	30.827	ENSONIG00000005519	rab34b	51	30.827
ENSONIG00000016776	RAB17	79	33.793	ENSONIG00000011559	rab33ba	75	30.556
ENSONIG00000016776	RAB17	91	52.121	ENSONIG00000016279	-	78	50.286
ENSONIG00000016776	RAB17	88	43.478	ENSONIG00000004394	rab6a	76	43.478
ENSONIG00000016776	RAB17	85	40.645	ENSONIG00000003725	rab18a	83	38.235
ENSONIG00000016776	RAB17	86	31.841	ENSONIG00000020945	-	97	31.841
ENSONIG00000016776	RAB17	88	42.593	ENSONIG00000002774	RAB41	75	42.593
ENSONIG00000016776	RAB17	88	41.875	ENSONIG00000016622	rab2a	77	41.818
ENSONIG00000016776	RAB17	91	52.121	ENSONIG00000001113	rab5c	74	52.121
ENSONIG00000016776	RAB17	89	40.123	ENSONIG00000006876	rab22a	83	40.123
ENSONIG00000016776	RAB17	83	34.868	ENSONIG00000012069	RAB15	77	33.129
ENSONIG00000016776	RAB17	80	31.579	ENSONIG00000011866	rasl11a	60	31.579
ENSONIG00000016776	RAB17	87	33.951	ENSONIG00000015828	rab33a	69	31.250
ENSONIG00000016776	RAB17	68	37.795	ENSONIG00000020296	si:dkey-13a21.4	63	37.209
ENSONIG00000016776	RAB17	77	31.206	ENSONIG00000014717	kras	85	31.056
ENSONIG00000016776	RAB17	93	40.588	ENSONIG00000000558	-	79	41.279
ENSONIG00000016776	RAB17	87	36.000	ENSONIG00000016851	-	89	36.000
ENSONIG00000016776	RAB17	81	32.903	ENSONIG00000020675	rab9a	82	30.994
ENSONIG00000016776	RAB17	86	49.045	ENSONIG00000002284	rab25b	81	45.562
ENSONIG00000016776	RAB17	86	46.497	ENSONIG00000002281	rab11al	83	42.222

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000016776	RAB17	100	85.903	ENSACIG00000006949	RAB17	100	85.903	Amphilophus_citrinellus
ENSONIG00000016776	RAB17	100	80.617	ENSAOCG00000009167	-	100	80.617	Amphiprion_ocellaris
ENSONIG00000016776	RAB17	100	81.057	ENSAPEG00000002915	RAB17	100	81.057	Amphiprion_percula
ENSONIG00000016776	RAB17	87	55.414	ENSACAG00000004554	RAB17	88	48.731	Anolis_carolinensis
ENSONIG00000016776	RAB17	100	92.511	ENSACLG00000001218	RAB17	100	92.511	Astatotilapia_calliptera
ENSONIG00000016776	RAB17	88	52.830	ENSFCAG00000012724	RAB17	79	51.479	Felis_catus
ENSONIG00000016776	RAB17	86	58.333	ENSFALG00000012783	RAB17	79	54.762	Ficedula_albicollis
ENSONIG00000016776	RAB17	88	58.491	ENSGALG00000003899	RAB17	78	56.805	Gallus_gallus
ENSONIG00000016776	RAB17	100	93.392	ENSHBUG00000001462	RAB17	100	93.392	Haplochromis_burtoni
ENSONIG00000016776	RAB17	92	69.340	ENSLBEG00000027691	RAB17	92	69.340	Labrus_bergylta
ENSONIG00000016776	RAB17	100	93.392	ENSMZEG00005013677	RAB17	100	93.392	Maylandia_zebra
ENSONIG00000016776	RAB17	88	59.119	ENSMGAG00000003135	RAB17	92	50.732	Meleagris_gallopavo
ENSONIG00000016776	RAB17	88	54.717	ENSMOCG00000006448	Rab17	85	51.087	Microtus_ochrogaster
ENSONIG00000016776	RAB17	100	77.093	ENSMMOG00000019258	RAB17	100	77.093	Mola_mola
ENSONIG00000016776	RAB17	90	53.086	ENSMODG00000008949	RAB17	96	46.330	Monodelphis_domestica
ENSONIG00000016776	RAB17	95	62.963	ENSMALG00000007905	RAB17	89	62.963	Monopterus_albus
ENSONIG00000016776	RAB17	91	91.748	ENSNBRG00000017793	RAB17	92	91.748	Neolamprologus_brichardi
ENSONIG00000016776	RAB17	88	54.717	ENSMEUG00000005002	RAB17	91	54.717	Notamacropus_eugenii
ENSONIG00000016776	RAB17	88	52.201	ENSPPRG00000003974	RAB17	76	51.852	Panthera_pardus
ENSONIG00000016776	RAB17	88	50.943	ENSPTIG00000014452	RAB17	79	49.112	Panthera_tigris_altaica
ENSONIG00000016776	RAB17	87	58.599	ENSPSIG00000016995	RAB17	66	59.236	Pelodiscus_sinensis
ENSONIG00000016776	RAB17	88	54.717	ENSPCIG00000021558	-	63	51.630	Phascolarctos_cinereus
ENSONIG00000016776	RAB17	100	93.392	ENSPNYG00000011135	RAB17	100	93.392	Pundamilia_nyererei
ENSONIG00000016776	RAB17	88	53.459	ENSSHAG00000009306	RAB17	88	50.526	Sarcophilus_harrisii
ENSONIG00000016776	RAB17	100	76.652	ENSSDUG00000006618	RAB17	100	76.652	Seriola_dumerili
ENSONIG00000016776	RAB17	100	77.093	ENSSLDG00000020918	RAB17	100	77.093	Seriola_lalandi_dorsalis
ENSONIG00000016776	RAB17	69	62.097	ENSSPUG00000015409	RAB17	60	60.000	Sphenodon_punctatus
ENSONIG00000016776	RAB17	100	76.652	ENSSPAG00000022624	-	100	76.652	Stegastes_partitus
ENSONIG00000016776	RAB17	86	60.897	ENSTGUG00000003786	RAB17	80	57.143	Taeniopygia_guttata