EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSONIG00000016851 (Gene tree)
Gene ID: 100709993
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Plus strand
Length: 6512 bases
Position: chrGL831226.1:2094912-2101423
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000021234	MMR_HSR1	PF01926.23	9.5e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000021253	-	2654	-	ENSONIP00000021234	217 (aa)	-	I3KJD9

Gene Model

Click here to download ENSONIG00000016851's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000016851's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSONIG00000016851	-	89	36.000	ENSONIG00000016776	RAB17	87	36.000
ENSONIG00000016851	-	78	47.929	ENSONIG00000002544	-	77	47.929
ENSONIG00000016851	-	96	40.191	ENSONIG00000002425	rab5aa	89	40.191
ENSONIG00000016851	-	77	36.257	ENSONIG00000020581	rab9b	84	36.257
ENSONIG00000016851	-	84	44.149	ENSONIG00000006715	-	80	44.149
ENSONIG00000016851	-	88	32.143	ENSONIG00000020945	-	95	32.143
ENSONIG00000016851	-	79	31.792	ENSONIG00000018503	rheb	92	31.792
ENSONIG00000016851	-	87	42.408	ENSONIG00000000558	-	88	42.408
ENSONIG00000016851	-	85	48.370	ENSONIG00000005708	rab30	88	48.370
ENSONIG00000016851	-	81	43.750	ENSONIG00000018673	rab18b	85	43.750
ENSONIG00000016851	-	77	46.707	ENSONIG00000009443	si:dkey-16l2.16	76	48.125
ENSONIG00000016851	-	75	41.104	ENSONIG00000011542	-	100	41.104
ENSONIG00000016851	-	91	46.193	ENSONIG00000006819	-	94	46.193
ENSONIG00000016851	-	78	45.665	ENSONIG00000006997	-	81	45.665
ENSONIG00000016851	-	63	31.387	ENSONIG00000014560	hrasb	94	30.000
ENSONIG00000016851	-	68	41.176	ENSONIG00000003367	-	73	41.176
ENSONIG00000016851	-	96	31.193	ENSONIG00000005519	rab34b	80	31.193
ENSONIG00000016851	-	76	36.471	ENSONIG00000020336	RAB7A	82	36.471
ENSONIG00000016851	-	76	34.911	ENSONIG00000020675	rab9a	83	34.911
ENSONIG00000016851	-	75	38.272	ENSONIG00000006876	rab22a	83	38.272
ENSONIG00000016851	-	79	39.884	ENSONIG00000002774	RAB41	80	39.884
ENSONIG00000016851	-	98	39.906	ENSONIG00000015990	rab35b	98	39.906
ENSONIG00000016851	-	80	41.711	ENSONIG00000011559	rab33ba	78	41.711
ENSONIG00000016851	-	84	39.487	ENSONIG00000016279	-	87	39.487
ENSONIG00000016851	-	80	40.462	ENSONIG00000018469	rab12	71	40.462
ENSONIG00000016851	-	99	39.556	ENSONIG00000002281	rab11al	97	39.556
ENSONIG00000016851	-	99	42.130	ENSONIG00000002284	rab25b	97	42.130
ENSONIG00000016851	-	80	30.286	ENSONIG00000014885	rabl2	73	30.286
ENSONIG00000016851	-	78	40.828	ENSONIG00000009886	rab6bb	81	40.828
ENSONIG00000016851	-	74	32.164	ENSONIG00000004448	si:ch73-116o1.2	77	32.164
ENSONIG00000016851	-	71	37.255	ENSONIG00000009749	rab23	72	36.047
ENSONIG00000016851	-	55	35.000	ENSONIG00000014717	kras	85	32.515
ENSONIG00000016851	-	99	40.278	ENSONIG00000002410	rab25a	98	40.278
ENSONIG00000016851	-	76	32.941	ENSONIG00000020296	si:dkey-13a21.4	82	32.941
ENSONIG00000016851	-	80	41.379	ENSONIG00000003725	rab18a	84	41.379
ENSONIG00000016851	-	81	36.111	ENSONIG00000019036	-	86	36.111
ENSONIG00000016851	-	75	44.444	ENSONIG00000001113	rab5c	89	38.389
ENSONIG00000016851	-	78	47.337	ENSONIG00000002535	rab11ba	77	47.337
ENSONIG00000016851	-	71	30.189	ENSONIG00000009008	dnajc27	59	30.189
ENSONIG00000016851	-	77	38.953	ENSONIG00000014892	RAB29	83	38.953
ENSONIG00000016851	-	73	30.994	ENSONIG00000014667	arl8a	87	30.994
ENSONIG00000016851	-	83	44.211	ENSONIG00000015072	RAB11A	88	44.211
ENSONIG00000016851	-	78	50.588	ENSONIG00000006340	rab13	84	50.588
ENSONIG00000016851	-	80	43.103	ENSONIG00000005781	rab15	81	43.103
ENSONIG00000016851	-	81	44.444	ENSONIG00000008545	RAB39B	84	44.444
ENSONIG00000016851	-	98	39.535	ENSONIG00000014099	rab14	96	39.535
ENSONIG00000016851	-	77	32.558	ENSONIG00000009978	si:cabz01085950.1	84	32.558
ENSONIG00000016851	-	72	33.121	ENSONIG00000007797	rras	76	33.121
ENSONIG00000016851	-	78	47.929	ENSONIG00000010435	rab11bb	77	47.929
ENSONIG00000016851	-	98	40.187	ENSONIG00000016622	rab2a	99	40.187
ENSONIG00000016851	-	90	46.429	ENSONIG00000002065	rab1ba	93	46.429
ENSONIG00000016851	-	80	41.379	ENSONIG00000012069	RAB15	82	41.379
ENSONIG00000016851	-	78	45.977	ENSONIG00000015828	rab33a	62	45.977
ENSONIG00000016851	-	75	40.741	ENSONIG00000004394	rab6a	77	40.741
ENSONIG00000016851	-	76	31.737	ENSONIG00000019066	rhebl1	90	31.737

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000016851	-	71	90.260	ENSAOCG00000015948	-	74	90.260	Amphiprion_ocellaris
ENSONIG00000016851	-	100	79.263	ENSATEG00000012781	-	97	79.263	Anabas_testudineus
ENSONIG00000016851	-	100	95.853	ENSACLG00000000860	-	97	95.853	Astatotilapia_calliptera
ENSONIG00000016851	-	99	73.611	ENSAMXG00000039737	RAB19	96	73.611	Astyanax_mexicanus
ENSONIG00000016851	-	92	64.824	ENSCPBG00000011914	RAB19	90	64.824	Chrysemys_picta_bellii
ENSONIG00000016851	-	100	80.645	ENSCSEG00000010402	-	97	80.645	Cynoglossus_semilaevis
ENSONIG00000016851	-	88	65.464	ENSFALG00000003709	RAB19	90	65.464	Ficedula_albicollis
ENSONIG00000016851	-	100	80.184	ENSGACG00000018847	-	96	80.184	Gasterosteus_aculeatus
ENSONIG00000016851	-	91	65.025	ENSGAGG00000013139	RAB19	92	65.025	Gopherus_agassizii
ENSONIG00000016851	-	99	66.667	ENSIPUG00000012509	-	96	66.667	Ictalurus_punctatus
ENSONIG00000016851	-	99	64.186	ENSIPUG00000016261	RAB19	94	64.186	Ictalurus_punctatus
ENSONIG00000016851	-	100	79.263	ENSKMAG00000012657	-	97	79.263	Kryptolebias_marmoratus
ENSONIG00000016851	-	83	95.028	ENSMZEG00005010813	-	87	95.028	Maylandia_zebra
ENSONIG00000016851	-	100	76.606	ENSPMGG00000007381	-	97	76.606	Periophthalmus_magnuspinnatus
ENSONIG00000016851	-	99	68.519	ENSPMGG00000009466	RAB19	95	68.519	Periophthalmus_magnuspinnatus
ENSONIG00000016851	-	100	95.853	ENSPNYG00000008498	-	96	95.853	Pundamilia_nyererei
ENSONIG00000016851	-	99	77.880	ENSTNIG00000018498	-	96	77.880	Tetraodon_nigroviridis
ENSONIG00000016851	-	93	70.297	ENSTNIG00000006650	RAB19	92	70.297	Tetraodon_nigroviridis