EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSONIG00000016897 (Gene tree)
Gene ID: 100705890
Gene Symbol: -
Alias: -
Full Name: RNA exonuclease 1 homolog
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Minus strand
Length: 12206 bases
Position: chrGL831307.1:21-12226
Accession: 100705890
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000021304	RNase_T	PF00929.24	4.1e-05	1	1
ENSONIP00000021305	RNase_T	PF00929.24	6.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000021324	-	3057	-	ENSONIP00000021305	1018 (aa)	-	I3KJL0
ENSONIT00000021325	-	1566	-	ENSONIP00000021306	522 (aa)	-	I3KJL1
ENSONIT00000021323	-	4503	-	ENSONIP00000021304	1164 (aa)	XP_005459818	I3KJK9

Gene Model

Click here to download ENSONIG00000016897's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000016897's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000016897	-	85	77.696	ENSAPOG00000005095	zgc:152968	94	77.396	Acanthochromis_polyacanthus
ENSONIG00000016897	-	85	84.819	ENSACIG00000002527	zgc:152968	99	84.412	Amphilophus_citrinellus
ENSONIG00000016897	-	88	74.447	ENSAOCG00000018049	-	99	73.544	Amphiprion_ocellaris
ENSONIG00000016897	-	95	56.093	ENSAPEG00000012559	zgc:152968	99	56.093	Amphiprion_percula
ENSONIG00000016897	-	100	92.361	ENSACLG00000020524	-	100	92.361	Astatotilapia_calliptera
ENSONIG00000016897	-	82	77.667	ENSCVAG00000015400	zgc:152968	100	77.667	Cyprinodon_variegatus
ENSONIG00000016897	-	82	50.623	ENSDARG00000037002	zgc:152968	70	51.067	Danio_rerio
ENSONIG00000016897	-	73	54.899	ENSELUG00000014272	zgc:152968	75	54.899	Esox_lucius
ENSONIG00000016897	-	100	53.640	ENSFHEG00000003641	-	100	69.193	Fundulus_heteroclitus
ENSONIG00000016897	-	92	74.609	ENSGAFG00000016810	-	93	74.609	Gambusia_affinis
ENSONIG00000016897	-	98	91.996	ENSHBUG00000007524	-	98	91.996	Haplochromis_burtoni
ENSONIG00000016897	-	66	64.198	ENSIPUG00000004633	zgc:152968	74	64.216	Ictalurus_punctatus
ENSONIG00000016897	-	85	71.834	ENSLBEG00000026485	zgc:152968	99	71.482	Labrus_bergylta
ENSONIG00000016897	-	100	52.181	ENSMAMG00000005920	-	100	52.377	Mastacembelus_armatus
ENSONIG00000016897	-	100	92.361	ENSMZEG00005013783	-	100	92.361	Maylandia_zebra
ENSONIG00000016897	-	90	79.259	ENSMMOG00000018072	zgc:152968	99	81.951	Mola_mola
ENSONIG00000016897	-	84	70.286	ENSMALG00000003536	-	97	69.943	Monopterus_albus
ENSONIG00000016897	-	79	67.009	ENSORLG00020012504	-	95	67.343	Oryzias_latipes_hni
ENSONIG00000016897	-	64	74.631	ENSOMEG00000008840	-	86	74.631	Oryzias_melastigma
ENSONIG00000016897	-	99	74.781	ENSPFOG00000006104	-	99	76.233	Poecilia_formosa
ENSONIG00000016897	-	99	75.330	ENSPLAG00000005034	-	98	76.960	Poecilia_latipinna
ENSONIG00000016897	-	99	75.000	ENSPMEG00000018012	-	100	55.724	Poecilia_mexicana
ENSONIG00000016897	-	88	72.840	ENSPREG00000007481	-	99	72.840	Poecilia_reticulata
ENSONIG00000016897	-	61	51.543	ENSSFOG00015023869	zgc:152968	66	62.379	Scleropages_formosus
ENSONIG00000016897	-	97	71.837	ENSSMAG00000008149	-	100	58.694	Scophthalmus_maximus
ENSONIG00000016897	-	87	82.683	ENSSDUG00000022323	-	98	82.683	Seriola_dumerili
ENSONIG00000016897	-	87	81.951	ENSSLDG00000018799	zgc:152968	97	81.951	Seriola_lalandi_dorsalis
ENSONIG00000016897	-	86	74.621	ENSSPAG00000007632	-	96	74.621	Stegastes_partitus
ENSONIG00000016897	-	100	67.748	ENSTRUG00000025441	zgc:152968	95	68.089	Takifugu_rubripes
ENSONIG00000016897	-	100	54.002	ENSXMAG00000026483	-	100	54.170	Xiphophorus_maculatus