EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSONIG00000017073 (Gene tree)
Gene ID: 100705386
Gene Symbol: rbm38
Alias: -
Full Name: RNA binding motif protein 38
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Minus strand
Length: 20834 bases
Position: chrGL831137.1:5668570-5689403
Accession: ZDB-GENE-030131-5923
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000021527	RRM_1	PF00076.22	2.9e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000021546	-	735	-	ENSONIP00000021527	245 (aa)	-	I3KK82

Gene Model

Click here to download ENSONIG00000017073's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000017073's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSONIG00000017073	rbm38	85	30.208	ENSONIG00000019452	-	81	30.208
ENSONIG00000017073	rbm38	80	58.173	ENSONIG00000002504	rbm24a	93	57.391
ENSONIG00000017073	rbm38	100	64.400	ENSONIG00000020324	-	100	64.400
ENSONIG00000017073	rbm38	85	30.208	ENSONIG00000011182	MSI1	86	30.208
ENSONIG00000017073	rbm38	63	68.553	ENSONIG00000003010	rbm24b	81	63.542

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000017073	rbm38	93	57.328	ENSG00000132819	RBM38	94	81.197	Homo_sapiens
ENSONIG00000017073	rbm38	100	64.542	ENSAPOG00000009939	-	99	64.961	Acanthochromis_polyacanthus
ENSONIG00000017073	rbm38	100	94.694	ENSAPOG00000003301	rbm38	98	94.694	Acanthochromis_polyacanthus
ENSONIG00000017073	rbm38	100	95.918	ENSACIG00000000010	rbm38	98	95.918	Amphilophus_citrinellus
ENSONIG00000017073	rbm38	100	63.492	ENSACIG00000012502	-	100	83.761	Amphilophus_citrinellus
ENSONIG00000017073	rbm38	97	65.000	ENSAOCG00000012559	RBM38	98	65.432	Amphiprion_ocellaris
ENSONIG00000017073	rbm38	100	94.694	ENSAOCG00000013497	-	98	94.694	Amphiprion_ocellaris
ENSONIG00000017073	rbm38	100	63.745	ENSAPEG00000023581	-	99	64.173	Amphiprion_percula
ENSONIG00000017073	rbm38	100	94.694	ENSAPEG00000013137	rbm38	98	94.694	Amphiprion_percula
ENSONIG00000017073	rbm38	100	88.980	ENSATEG00000016366	rbm38	98	88.980	Anabas_testudineus
ENSONIG00000017073	rbm38	100	64.940	ENSATEG00000016710	-	99	65.354	Anabas_testudineus
ENSONIG00000017073	rbm38	95	55.696	ENSACAG00000016238	RBM38	90	55.696	Anolis_carolinensis
ENSONIG00000017073	rbm38	95	57.384	ENSANAG00000031959	RBM38	81	84.848	Aotus_nancymaae
ENSONIG00000017073	rbm38	100	64.400	ENSACLG00000019514	-	99	64.400	Astatotilapia_calliptera
ENSONIG00000017073	rbm38	97	55.882	ENSAMXG00000038120	rbm38	96	55.882	Astyanax_mexicanus
ENSONIG00000017073	rbm38	100	61.446	ENSAMXG00000015601	-	99	61.446	Astyanax_mexicanus
ENSONIG00000017073	rbm38	93	58.621	ENSBTAG00000008105	RBM38	88	58.621	Bos_taurus
ENSONIG00000017073	rbm38	59	59.310	WBGene00006321	sup-12	68	71.569	Caenorhabditis_elegans
ENSONIG00000017073	rbm38	93	56.897	ENSCJAG00000019139	RBM38	81	84.848	Callithrix_jacchus
ENSONIG00000017073	rbm38	95	57.806	ENSCAFG00020021943	RBM38	90	57.806	Canis_lupus_dingo
ENSONIG00000017073	rbm38	93	57.759	ENSCHIG00000002609	RBM38	88	57.759	Capra_hircus
ENSONIG00000017073	rbm38	93	58.621	ENSCPOG00000012781	RBM38	88	58.621	Cavia_porcellus
ENSONIG00000017073	rbm38	93	56.897	ENSCCAG00000036872	RBM38	81	84.848	Cebus_capucinus
ENSONIG00000017073	rbm38	93	58.621	ENSCATG00000032133	RBM38	81	84.848	Cercocebus_atys
ENSONIG00000017073	rbm38	95	57.806	ENSCLAG00000005906	RBM38	93	57.806	Chinchilla_lanigera
ENSONIG00000017073	rbm38	93	58.621	ENSCSAG00000015503	RBM38	88	58.621	Chlorocebus_sabaeus
ENSONIG00000017073	rbm38	95	59.494	ENSCPBG00000024059	RBM38	99	59.494	Chrysemys_picta_bellii
ENSONIG00000017073	rbm38	61	61.783	ENSCING00000025102	-	66	61.783	Ciona_intestinalis
ENSONIG00000017073	rbm38	62	59.494	ENSCSAVG00000001132	-	58	59.494	Ciona_savignyi
ENSONIG00000017073	rbm38	95	45.763	ENSCANG00000030105	-	79	45.763	Colobus_angolensis_palliatus
ENSONIG00000017073	rbm38	73	65.027	ENSCGRG00001012928	Rbm38	89	58.190	Cricetulus_griseus_chok1gshd
ENSONIG00000017073	rbm38	85	67.464	ENSCSEG00000020943	rbm38	68	67.464	Cynoglossus_semilaevis
ENSONIG00000017073	rbm38	100	65.200	ENSCSEG00000004701	-	99	64.542	Cynoglossus_semilaevis
ENSONIG00000017073	rbm38	100	63.745	ENSCVAG00000005472	-	99	64.173	Cyprinodon_variegatus
ENSONIG00000017073	rbm38	100	84.490	ENSCVAG00000015952	rbm38	98	84.490	Cyprinodon_variegatus
ENSONIG00000017073	rbm38	100	63.968	ENSDARG00000058818	rbm38	100	63.968	Danio_rerio
ENSONIG00000017073	rbm38	95	57.021	ENSDNOG00000032004	RBM38	99	57.021	Dasypus_novemcinctus
ENSONIG00000017073	rbm38	93	57.328	ENSECAG00000007700	RBM38	88	57.328	Equus_caballus
ENSONIG00000017073	rbm38	92	56.897	ENSEEUG00000013489	RBM38	88	57.759	Erinaceus_europaeus
ENSONIG00000017073	rbm38	100	64.173	ENSELUG00000005849	-	99	64.173	Esox_lucius
ENSONIG00000017073	rbm38	93	73.043	ENSELUG00000000585	-	100	73.043	Esox_lucius
ENSONIG00000017073	rbm38	76	64.362	ENSFCAG00000042916	RBM38	81	83.838	Felis_catus
ENSONIG00000017073	rbm38	71	68.927	ENSFALG00000010805	RBM38	90	68.182	Ficedula_albicollis
ENSONIG00000017073	rbm38	100	61.569	ENSFHEG00000006160	-	99	61.569	Fundulus_heteroclitus
ENSONIG00000017073	rbm38	100	85.366	ENSFHEG00000017748	rbm38	98	85.366	Fundulus_heteroclitus
ENSONIG00000017073	rbm38	77	68.063	ENSGMOG00000016655	-	99	71.053	Gadus_morhua
ENSONIG00000017073	rbm38	95	56.962	ENSGALG00000026081	RBM38	99	56.962	Gallus_gallus
ENSONIG00000017073	rbm38	95	62.185	ENSGACG00000009873	-	100	62.185	Gasterosteus_aculeatus
ENSONIG00000017073	rbm38	95	79.741	ENSGACG00000015224	rbm38	99	79.741	Gasterosteus_aculeatus
ENSONIG00000017073	rbm38	95	60.338	ENSGAGG00000001187	RBM38	99	60.338	Gopherus_agassizii
ENSONIG00000017073	rbm38	100	99.592	ENSHBUG00000012058	rbm38	98	99.592	Haplochromis_burtoni
ENSONIG00000017073	rbm38	100	64.400	ENSHBUG00000011778	-	99	64.400	Haplochromis_burtoni
ENSONIG00000017073	rbm38	95	57.384	ENSHGLG00000015077	RBM38	90	57.384	Heterocephalus_glaber_female
ENSONIG00000017073	rbm38	99	61.633	ENSHCOG00000019040	rbm38	97	61.633	Hippocampus_comes
ENSONIG00000017073	rbm38	84	66.986	ENSHCOG00000005622	-	59	67.943	Hippocampus_comes
ENSONIG00000017073	rbm38	100	60.241	ENSIPUG00000019349	-	99	60.241	Ictalurus_punctatus
ENSONIG00000017073	rbm38	93	74.359	ENSKMAG00000012402	rbm38	98	74.359	Kryptolebias_marmoratus
ENSONIG00000017073	rbm38	100	89.388	ENSLBEG00000018878	rbm38	98	89.388	Labrus_bergylta
ENSONIG00000017073	rbm38	100	62.400	ENSLBEG00000016163	RBM38	99	63.386	Labrus_bergylta
ENSONIG00000017073	rbm38	100	65.587	ENSLOCG00000003456	rbm38	99	65.587	Lepisosteus_oculatus
ENSONIG00000017073	rbm38	93	58.621	ENSMFAG00000043808	RBM38	81	84.848	Macaca_fascicularis
ENSONIG00000017073	rbm38	93	58.621	ENSMMUG00000031391	RBM38	81	84.848	Macaca_mulatta
ENSONIG00000017073	rbm38	93	58.621	ENSMNEG00000034683	RBM38	81	84.848	Macaca_nemestrina
ENSONIG00000017073	rbm38	100	66.400	ENSMAMG00000020499	RBM38	99	66.798	Mastacembelus_armatus
ENSONIG00000017073	rbm38	100	91.429	ENSMAMG00000024135	rbm38	98	91.429	Mastacembelus_armatus
ENSONIG00000017073	rbm38	100	64.400	ENSMZEG00005000849	-	99	64.400	Maylandia_zebra
ENSONIG00000017073	rbm38	100	99.592	ENSMZEG00005026036	rbm38	98	99.592	Maylandia_zebra
ENSONIG00000017073	rbm38	73	65.574	ENSMAUG00000021211	Rbm38	89	59.052	Mesocricetus_auratus
ENSONIG00000017073	rbm38	95	57.384	ENSMICG00000038011	RBM38	99	57.384	Microcebus_murinus
ENSONIG00000017073	rbm38	73	65.574	ENSMOCG00000008715	Rbm38	89	59.052	Microtus_ochrogaster
ENSONIG00000017073	rbm38	100	63.745	ENSMMOG00000020051	-	99	64.173	Mola_mola
ENSONIG00000017073	rbm38	80	61.809	ENSMODG00000016458	RBM38	93	56.432	Monodelphis_domestica
ENSONIG00000017073	rbm38	100	73.878	ENSMALG00000022327	rbm38	98	74.694	Monopterus_albus
ENSONIG00000017073	rbm38	77	73.684	ENSMALG00000004680	RBM38	89	64.435	Monopterus_albus
ENSONIG00000017073	rbm38	93	58.190	MGP_CAROLIEiJ_G0024745	Rbm38	89	57.328	Mus_caroli
ENSONIG00000017073	rbm38	93	58.190	ENSMUSG00000027510	Rbm38	89	57.328	Mus_musculus
ENSONIG00000017073	rbm38	93	57.328	MGP_PahariEiJ_G0026186	Rbm38	89	57.328	Mus_pahari
ENSONIG00000017073	rbm38	93	58.190	MGP_SPRETEiJ_G0025665	Rbm38	89	58.190	Mus_spretus
ENSONIG00000017073	rbm38	76	64.894	ENSMPUG00000006518	RBM38	91	64.894	Mustela_putorius_furo
ENSONIG00000017073	rbm38	93	57.759	ENSMLUG00000011140	RBM38	98	57.759	Myotis_lucifugus
ENSONIG00000017073	rbm38	100	64.400	ENSNBRG00000022545	-	99	64.400	Neolamprologus_brichardi
ENSONIG00000017073	rbm38	100	98.776	ENSNBRG00000022685	rbm38	98	98.776	Neolamprologus_brichardi
ENSONIG00000017073	rbm38	50	70.492	ENSMEUG00000005475	-	91	70.492	Notamacropus_eugenii
ENSONIG00000017073	rbm38	93	59.483	ENSODEG00000007980	RBM38	88	59.483	Octodon_degus
ENSONIG00000017073	rbm38	79	63.265	ENSOANG00000009259	RBM38	74	63.265	Ornithorhynchus_anatinus
ENSONIG00000017073	rbm38	100	62.055	ENSORLG00000027180	-	99	62.891	Oryzias_latipes
ENSONIG00000017073	rbm38	100	82.114	ENSORLG00000012154	rbm38	98	82.114	Oryzias_latipes
ENSONIG00000017073	rbm38	100	82.114	ENSORLG00020017871	rbm38	98	82.114	Oryzias_latipes_hni
ENSONIG00000017073	rbm38	100	62.451	ENSORLG00020020751	-	99	62.891	Oryzias_latipes_hni
ENSONIG00000017073	rbm38	100	82.114	ENSORLG00015012606	rbm38	98	82.114	Oryzias_latipes_hsok
ENSONIG00000017073	rbm38	100	62.302	ENSORLG00015017040	-	99	63.492	Oryzias_latipes_hsok
ENSONIG00000017073	rbm38	100	63.347	ENSOMEG00000023912	-	99	64.143	Oryzias_melastigma
ENSONIG00000017073	rbm38	100	81.301	ENSOMEG00000006805	rbm38	98	81.301	Oryzias_melastigma
ENSONIG00000017073	rbm38	96	56.846	ENSOGAG00000029136	RBM38	91	56.846	Otolemur_garnettii
ENSONIG00000017073	rbm38	76	64.362	ENSPPRG00000009507	RBM38	81	83.838	Panthera_pardus
ENSONIG00000017073	rbm38	79	63.452	ENSPTRG00000013661	RBM38	81	84.848	Pan_troglodytes
ENSONIG00000017073	rbm38	59	71.724	ENSPTRG00000045845	-	77	71.724	Pan_troglodytes
ENSONIG00000017073	rbm38	93	58.621	ENSPANG00000020919	-	81	84.848	Papio_anubis
ENSONIG00000017073	rbm38	97	45.868	ENSPANG00000033127	-	92	46.383	Papio_anubis
ENSONIG00000017073	rbm38	100	60.558	ENSPKIG00000025417	rbm38	99	63.137	Paramormyrops_kingsleyae
ENSONIG00000017073	rbm38	100	59.036	ENSPKIG00000018122	-	100	80.342	Paramormyrops_kingsleyae
ENSONIG00000017073	rbm38	95	59.494	ENSPSIG00000011649	RBM38	92	59.494	Pelodiscus_sinensis
ENSONIG00000017073	rbm38	99	78.279	ENSPMGG00000011343	rbm38	98	80.738	Periophthalmus_magnuspinnatus
ENSONIG00000017073	rbm38	100	60.474	ENSPMGG00000017094	-	99	60.870	Periophthalmus_magnuspinnatus
ENSONIG00000017073	rbm38	96	57.261	ENSPCIG00000013648	RBM38	93	57.261	Phascolarctos_cinereus
ENSONIG00000017073	rbm38	100	85.944	ENSPFOG00000011658	rbm38	98	85.944	Poecilia_formosa
ENSONIG00000017073	rbm38	100	63.137	ENSPLAG00000002500	-	99	64.400	Poecilia_latipinna
ENSONIG00000017073	rbm38	100	85.542	ENSPLAG00000005218	rbm38	98	85.542	Poecilia_latipinna
ENSONIG00000017073	rbm38	100	86.345	ENSPMEG00000015770	rbm38	98	86.345	Poecilia_mexicana
ENSONIG00000017073	rbm38	100	85.542	ENSPREG00000007398	rbm38	98	85.542	Poecilia_reticulata
ENSONIG00000017073	rbm38	96	57.261	ENSPCOG00000026201	RBM38	84	81.731	Propithecus_coquereli
ENSONIG00000017073	rbm38	77	40.838	ENSPVAG00000006457	RBM38	92	39.167	Pteropus_vampyrus
ENSONIG00000017073	rbm38	100	64.400	ENSPNYG00000019727	-	100	83.761	Pundamilia_nyererei
ENSONIG00000017073	rbm38	100	99.184	ENSPNYG00000021373	rbm38	98	99.184	Pundamilia_nyererei
ENSONIG00000017073	rbm38	100	62.249	ENSPNAG00000015123	-	91	81.356	Pygocentrus_nattereri
ENSONIG00000017073	rbm38	97	60.251	ENSPNAG00000010596	rbm38	96	60.251	Pygocentrus_nattereri
ENSONIG00000017073	rbm38	93	59.052	ENSRNOG00000006420	Rbm38	89	59.052	Rattus_norvegicus
ENSONIG00000017073	rbm38	95	50.427	ENSRROG00000036388	-	89	50.427	Rhinopithecus_roxellana
ENSONIG00000017073	rbm38	95	56.540	ENSSBOG00000031053	RBM38	92	84.848	Saimiri_boliviensis_boliviensis
ENSONIG00000017073	rbm38	100	56.627	ENSSFOG00015004453	rbm38	99	61.044	Scleropages_formosus
ENSONIG00000017073	rbm38	100	93.878	ENSSDUG00000022611	rbm38	98	93.878	Seriola_dumerili
ENSONIG00000017073	rbm38	100	64.940	ENSSDUG00000021082	RBM38	99	65.748	Seriola_dumerili
ENSONIG00000017073	rbm38	100	64.940	ENSSLDG00000011778	RBM38	99	65.748	Seriola_lalandi_dorsalis
ENSONIG00000017073	rbm38	100	93.878	ENSSLDG00000010845	rbm38	98	93.878	Seriola_lalandi_dorsalis
ENSONIG00000017073	rbm38	100	95.102	ENSSPAG00000011113	rbm38	98	95.102	Stegastes_partitus
ENSONIG00000017073	rbm38	100	64.940	ENSSPAG00000020989	RBM38	99	64.961	Stegastes_partitus
ENSONIG00000017073	rbm38	93	58.190	ENSSSCG00000007504	RBM38	88	58.190	Sus_scrofa
ENSONIG00000017073	rbm38	100	62.550	ENSTRUG00000019869	-	99	62.151	Takifugu_rubripes
ENSONIG00000017073	rbm38	100	83.265	ENSTRUG00000024954	rbm38	98	84.082	Takifugu_rubripes
ENSONIG00000017073	rbm38	95	63.713	ENSTNIG00000007093	-	99	63.713	Tetraodon_nigroviridis
ENSONIG00000017073	rbm38	76	64.362	ENSUAMG00000019780	RBM38	90	57.384	Ursus_americanus
ENSONIG00000017073	rbm38	95	57.806	ENSVVUG00000017246	RBM38	90	57.806	Vulpes_vulpes
ENSONIG00000017073	rbm38	78	63.590	ENSXETG00000011268	rbm38	98	57.083	Xenopus_tropicalis
ENSONIG00000017073	rbm38	73	60.870	ENSXCOG00000017324	-	75	60.870	Xiphophorus_couchianus
ENSONIG00000017073	rbm38	100	87.755	ENSXMAG00000023662	rbm38	98	87.755	Xiphophorus_maculatus