EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSONIG00000017078 (Gene tree)
Gene ID: -
Gene Symbol: urb2
Alias: -
Full Name: URB2 ribosome biogenesis homolog
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Plus strand
Length: 19925 bases
Position: chrGL831287.1:469423-489347
Accession: ZDB-GENE-030131-2621
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000021533	Urb2	PF10441.9	8.7e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000021552	-	4720	-	ENSONIP00000021533	1519 (aa)	-	I3KK88

Gene Model

Click here to download ENSONIG00000017078's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000017078's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000017078	urb2	99	38.014	ENSG00000135763	URB2	99	60.714	Homo_sapiens
ENSONIG00000017078	urb2	89	72.156	ENSAPOG00000000608	urb2	95	72.087	Acanthochromis_polyacanthus
ENSONIG00000017078	urb2	100	38.068	ENSAMEG00000009206	URB2	100	38.141	Ailuropoda_melanoleuca
ENSONIG00000017078	urb2	100	79.213	ENSAOCG00000019961	urb2	97	79.213	Amphiprion_ocellaris
ENSONIG00000017078	urb2	100	78.652	ENSAPEG00000005263	urb2	97	78.652	Amphiprion_percula
ENSONIG00000017078	urb2	100	65.269	ENSATEG00000020930	urb2	100	64.973	Anabas_testudineus
ENSONIG00000017078	urb2	97	38.210	ENSAPLG00000002998	URB2	99	38.653	Anas_platyrhynchos
ENSONIG00000017078	urb2	99	39.377	ENSACAG00000001285	URB2	99	39.194	Anolis_carolinensis
ENSONIG00000017078	urb2	99	38.247	ENSANAG00000033963	URB2	99	37.953	Aotus_nancymaae
ENSONIG00000017078	urb2	92	88.319	ENSACLG00000009254	urb2	98	88.319	Astatotilapia_calliptera
ENSONIG00000017078	urb2	99	43.806	ENSAMXG00000003474	urb2	99	43.565	Astyanax_mexicanus
ENSONIG00000017078	urb2	100	37.973	ENSBTAG00000010180	URB2	100	37.909	Bos_taurus
ENSONIG00000017078	urb2	95	61.429	ENSCJAG00000010968	URB2	99	61.429	Callithrix_jacchus
ENSONIG00000017078	urb2	99	36.899	ENSCAFG00000012118	URB2	99	36.970	Canis_familiaris
ENSONIG00000017078	urb2	92	35.734	ENSCAFG00020027217	URB2	98	35.808	Canis_lupus_dingo
ENSONIG00000017078	urb2	100	37.203	ENSCHIG00000014513	URB2	100	37.203	Capra_hircus
ENSONIG00000017078	urb2	100	38.614	ENSTSYG00000006924	URB2	100	38.318	Carlito_syrichta
ENSONIG00000017078	urb2	63	45.133	ENSCPOG00000020777	-	99	44.134	Cavia_porcellus
ENSONIG00000017078	urb2	99	38.718	ENSCCAG00000023932	URB2	99	38.432	Cebus_capucinus
ENSONIG00000017078	urb2	99	38.418	ENSCATG00000043366	URB2	99	38.442	Cercocebus_atys
ENSONIG00000017078	urb2	99	38.018	ENSCLAG00000006268	URB2	99	37.978	Chinchilla_lanigera
ENSONIG00000017078	urb2	99	38.418	ENSCSAG00000010599	URB2	99	38.442	Chlorocebus_sabaeus
ENSONIG00000017078	urb2	69	41.853	ENSCHOG00000010163	URB2	70	41.853	Choloepus_hoffmanni
ENSONIG00000017078	urb2	99	40.013	ENSCPBG00000006191	URB2	99	40.000	Chrysemys_picta_bellii
ENSONIG00000017078	urb2	99	38.629	ENSCANG00000023711	URB2	99	38.600	Colobus_angolensis_palliatus
ENSONIG00000017078	urb2	99	37.156	ENSCGRG00001009591	Urb2	99	37.156	Cricetulus_griseus_chok1gshd
ENSONIG00000017078	urb2	99	37.156	ENSCGRG00000011259	Urb2	99	37.156	Cricetulus_griseus_crigri
ENSONIG00000017078	urb2	100	53.273	ENSCSEG00000000299	urb2	100	52.941	Cynoglossus_semilaevis
ENSONIG00000017078	urb2	100	60.829	ENSCVAG00000011011	urb2	100	60.829	Cyprinodon_variegatus
ENSONIG00000017078	urb2	100	45.390	ENSDARG00000003217	urb2	99	70.000	Danio_rerio
ENSONIG00000017078	urb2	97	34.449	ENSDNOG00000043064	URB2	99	34.492	Dasypus_novemcinctus
ENSONIG00000017078	urb2	99	36.652	ENSDORG00000014975	Urb2	99	36.565	Dipodomys_ordii
ENSONIG00000017078	urb2	95	40.426	ENSETEG00000002869	URB2	95	40.426	Echinops_telfairi
ENSONIG00000017078	urb2	100	38.530	ENSEASG00005012060	URB2	100	38.466	Equus_asinus_asinus
ENSONIG00000017078	urb2	93	61.538	ENSECAG00000012338	URB2	100	61.538	Equus_caballus
ENSONIG00000017078	urb2	92	56.028	ENSEEUG00000002669	URB2	92	56.028	Erinaceus_europaeus
ENSONIG00000017078	urb2	100	51.383	ENSELUG00000014647	urb2	100	51.318	Esox_lucius
ENSONIG00000017078	urb2	99	37.492	ENSFCAG00000007662	URB2	99	37.371	Felis_catus
ENSONIG00000017078	urb2	99	39.094	ENSFALG00000003385	URB2	99	39.094	Ficedula_albicollis
ENSONIG00000017078	urb2	99	37.556	ENSFDAG00000021079	URB2	99	37.845	Fukomys_damarensis
ENSONIG00000017078	urb2	100	61.224	ENSFHEG00000010357	urb2	100	61.012	Fundulus_heteroclitus
ENSONIG00000017078	urb2	99	56.124	ENSGMOG00000012459	urb2	100	56.384	Gadus_morhua
ENSONIG00000017078	urb2	99	40.178	ENSGALG00000011101	URB2	99	40.114	Gallus_gallus
ENSONIG00000017078	urb2	100	67.674	ENSGACG00000016179	urb2	100	67.416	Gasterosteus_aculeatus
ENSONIG00000017078	urb2	99	40.265	ENSGAGG00000021879	URB2	99	40.253	Gopherus_agassizii
ENSONIG00000017078	urb2	99	37.981	ENSGGOG00000025643	URB2	99	37.841	Gorilla_gorilla
ENSONIG00000017078	urb2	100	95.294	ENSHBUG00000018469	urb2	97	95.294	Haplochromis_burtoni
ENSONIG00000017078	urb2	97	37.057	ENSHGLG00000016561	URB2	99	37.451	Heterocephalus_glaber_female
ENSONIG00000017078	urb2	99	37.709	ENSHGLG00100001838	URB2	99	37.742	Heterocephalus_glaber_male
ENSONIG00000017078	urb2	100	44.144	ENSIPUG00000020315	urb2	100	43.959	Ictalurus_punctatus
ENSONIG00000017078	urb2	99	37.468	ENSSTOG00000025323	URB2	99	37.556	Ictidomys_tridecemlineatus
ENSONIG00000017078	urb2	99	37.128	ENSJJAG00000011998	Urb2	99	37.548	Jaculus_jaculus
ENSONIG00000017078	urb2	100	61.890	ENSKMAG00000020129	urb2	100	61.432	Kryptolebias_marmoratus
ENSONIG00000017078	urb2	99	39.631	ENSLACG00000002038	URB2	99	39.593	Latimeria_chalumnae
ENSONIG00000017078	urb2	99	46.431	ENSLOCG00000015462	urb2	99	46.367	Lepisosteus_oculatus
ENSONIG00000017078	urb2	99	36.980	ENSLAFG00000012484	URB2	100	36.615	Loxodonta_africana
ENSONIG00000017078	urb2	99	38.590	ENSMFAG00000039905	URB2	99	38.614	Macaca_fascicularis
ENSONIG00000017078	urb2	99	38.654	ENSMMUG00000009509	URB2	99	38.679	Macaca_mulatta
ENSONIG00000017078	urb2	99	38.315	ENSMNEG00000038762	URB2	99	38.340	Macaca_nemestrina
ENSONIG00000017078	urb2	99	38.544	ENSMLEG00000043252	URB2	99	38.569	Mandrillus_leucophaeus
ENSONIG00000017078	urb2	100	60.913	ENSMAMG00000020365	urb2	100	60.735	Mastacembelus_armatus
ENSONIG00000017078	urb2	100	94.706	ENSMZEG00005011027	urb2	99	94.706	Maylandia_zebra
ENSONIG00000017078	urb2	94	37.314	ENSMGAG00000012073	URB2	98	37.812	Meleagris_gallopavo
ENSONIG00000017078	urb2	95	58.865	ENSMAUG00000017980	Urb2	99	58.865	Mesocricetus_auratus
ENSONIG00000017078	urb2	100	37.860	ENSMICG00000033302	URB2	100	37.765	Microcebus_murinus
ENSONIG00000017078	urb2	99	37.372	ENSMOCG00000020369	Urb2	99	37.396	Microtus_ochrogaster
ENSONIG00000017078	urb2	100	65.122	ENSMALG00000006529	urb2	100	64.765	Monopterus_albus
ENSONIG00000017078	urb2	99	37.081	ENSMUSG00000031976	Urb2	99	37.105	Mus_musculus
ENSONIG00000017078	urb2	99	38.447	ENSMPUG00000012438	URB2	99	38.457	Mustela_putorius_furo
ENSONIG00000017078	urb2	99	37.723	ENSNGAG00000016524	Urb2	99	37.628	Nannospalax_galili
ENSONIG00000017078	urb2	99	37.920	ENSNLEG00000014450	URB2	99	37.628	Nomascus_leucogenys
ENSONIG00000017078	urb2	90	45.581	ENSMEUG00000016434	URB2	92	45.581	Notamacropus_eugenii
ENSONIG00000017078	urb2	87	76.190	ENSOPRG00000009906	URB2	83	76.190	Ochotona_princeps
ENSONIG00000017078	urb2	99	37.911	ENSODEG00000005593	URB2	99	38.009	Octodon_degus
ENSONIG00000017078	urb2	99	35.561	ENSOANG00000013732	URB2	99	35.886	Ornithorhynchus_anatinus
ENSONIG00000017078	urb2	100	38.117	ENSOCUG00000010700	URB2	100	38.062	Oryctolagus_cuniculus
ENSONIG00000017078	urb2	100	60.597	ENSORLG00000010915	urb2	100	60.475	Oryzias_latipes
ENSONIG00000017078	urb2	100	60.597	ENSORLG00020003361	urb2	100	60.414	Oryzias_latipes_hni
ENSONIG00000017078	urb2	100	60.292	ENSORLG00015001534	urb2	100	60.171	Oryzias_latipes_hsok
ENSONIG00000017078	urb2	100	61.029	ENSOMEG00000010076	urb2	100	60.846	Oryzias_melastigma
ENSONIG00000017078	urb2	100	36.795	ENSOGAG00000003021	URB2	100	36.946	Otolemur_garnettii
ENSONIG00000017078	urb2	100	37.468	ENSOARG00000003102	URB2	100	37.341	Ovis_aries
ENSONIG00000017078	urb2	99	37.981	ENSPPAG00000040629	URB2	99	37.841	Pan_paniscus
ENSONIG00000017078	urb2	99	37.428	ENSPPRG00000012767	URB2	99	37.436	Panthera_pardus
ENSONIG00000017078	urb2	99	37.749	ENSPTIG00000012577	URB2	99	72.727	Panthera_tigris_altaica
ENSONIG00000017078	urb2	99	38.122	ENSPTRG00000002092	URB2	99	37.984	Pan_troglodytes
ENSONIG00000017078	urb2	99	37.278	ENSPANG00000002245	URB2	99	37.302	Papio_anubis
ENSONIG00000017078	urb2	99	45.258	ENSPKIG00000005787	urb2	99	45.258	Paramormyrops_kingsleyae
ENSONIG00000017078	urb2	99	39.117	ENSPSIG00000002690	URB2	99	39.166	Pelodiscus_sinensis
ENSONIG00000017078	urb2	96	36.133	ENSPEMG00000019551	Urb2	100	36.230	Peromyscus_maniculatus_bairdii
ENSONIG00000017078	urb2	99	38.600	ENSPCIG00000030071	URB2	99	38.471	Phascolarctos_cinereus
ENSONIG00000017078	urb2	100	63.175	ENSPFOG00000014330	urb2	100	62.918	Poecilia_formosa
ENSONIG00000017078	urb2	100	61.587	ENSPLAG00000014654	urb2	100	61.462	Poecilia_latipinna
ENSONIG00000017078	urb2	100	62.024	ENSPMEG00000012356	urb2	100	61.774	Poecilia_mexicana
ENSONIG00000017078	urb2	100	61.587	ENSPREG00000010268	urb2	100	61.399	Poecilia_reticulata
ENSONIG00000017078	urb2	100	37.768	ENSPPYG00000000123	URB2	100	37.658	Pongo_abelii
ENSONIG00000017078	urb2	100	37.999	ENSPCOG00000023537	URB2	100	38.159	Propithecus_coquereli
ENSONIG00000017078	urb2	99	35.366	ENSPVAG00000002108	URB2	99	35.328	Pteropus_vampyrus
ENSONIG00000017078	urb2	89	91.055	ENSPNYG00000016840	urb2	95	91.055	Pundamilia_nyererei
ENSONIG00000017078	urb2	99	45.243	ENSPNAG00000013684	urb2	99	45.142	Pygocentrus_nattereri
ENSONIG00000017078	urb2	99	37.325	ENSRNOG00000026853	Urb2	97	37.524	Rattus_norvegicus
ENSONIG00000017078	urb2	99	38.526	ENSRBIG00000037937	URB2	99	38.377	Rhinopithecus_bieti
ENSONIG00000017078	urb2	99	38.590	ENSRROG00000039854	URB2	99	38.442	Rhinopithecus_roxellana
ENSONIG00000017078	urb2	99	38.264	ENSSBOG00000023055	URB2	99	37.847	Saimiri_boliviensis_boliviensis
ENSONIG00000017078	urb2	99	38.220	ENSSHAG00000014735	URB2	99	38.343	Sarcophilus_harrisii
ENSONIG00000017078	urb2	97	45.076	ENSSFOG00015015432	urb2	98	45.010	Scleropages_formosus
ENSONIG00000017078	urb2	89	65.123	ENSSMAG00000004984	urb2	95	64.578	Scophthalmus_maximus
ENSONIG00000017078	urb2	100	67.116	ENSSDUG00000000902	urb2	100	67.155	Seriola_dumerili
ENSONIG00000017078	urb2	99	39.535	ENSSPUG00000018549	URB2	99	39.836	Sphenodon_punctatus
ENSONIG00000017078	urb2	100	70.585	ENSSPAG00000013632	urb2	100	70.326	Stegastes_partitus
ENSONIG00000017078	urb2	100	38.432	ENSSSCG00000010186	URB2	100	38.407	Sus_scrofa
ENSONIG00000017078	urb2	99	39.267	ENSTGUG00000009990	URB2	99	39.217	Taeniopygia_guttata
ENSONIG00000017078	urb2	100	56.886	ENSTRUG00000008173	urb2	100	56.886	Takifugu_rubripes
ENSONIG00000017078	urb2	95	66.066	ENSTNIG00000017689	urb2	100	57.521	Tetraodon_nigroviridis
ENSONIG00000017078	urb2	90	76.190	ENSTTRG00000014864	URB2	90	76.190	Tursiops_truncatus
ENSONIG00000017078	urb2	100	38.132	ENSUAMG00000015022	URB2	100	38.205	Ursus_americanus
ENSONIG00000017078	urb2	100	37.995	ENSUMAG00000004728	URB2	100	38.126	Ursus_maritimus
ENSONIG00000017078	urb2	51	63.043	ENSVPAG00000001750	-	51	63.043	Vicugna_pacos
ENSONIG00000017078	urb2	99	37.244	ENSVVUG00000006747	URB2	99	37.315	Vulpes_vulpes
ENSONIG00000017078	urb2	99	36.083	ENSXETG00000023331	urb2	99	35.919	Xenopus_tropicalis
ENSONIG00000017078	urb2	100	61.462	ENSXMAG00000015059	urb2	100	61.212	Xiphophorus_maculatus