EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSONIG00000017169 (Gene tree)
Gene ID: 100691305
Gene Symbol: ern1
Alias: -
Full Name: endoplasmic reticulum to nucleus signaling 1
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Plus strand
Length: 14521 bases
Position: chrGL831339.1:873601-888121
Accession: ZDB-GENE-050522-431
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000021652	Ribonuc_2-5A	PF06479.12	8.4e-41	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000021671	-	2883	-	ENSONIP00000021652	961 (aa)	-	I3KKK7

Gene Model

Click here to download ENSONIG00000017169's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000017169's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSONIG00000017169	ern1	96	56.064	ENSONIG00000003276	ern2	97	56.568

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000017169	ern1	99	92.179	ENSAPOG00000009999	ern1	89	92.179	Acanthochromis_polyacanthus
ENSONIG00000017169	ern1	98	95.763	ENSACIG00000021716	ern1	87	95.763	Amphilophus_citrinellus
ENSONIG00000017169	ern1	99	93.006	ENSAOCG00000012309	ern1	89	92.805	Amphiprion_ocellaris
ENSONIG00000017169	ern1	99	92.284	ENSAPEG00000011263	ern1	98	93.838	Amphiprion_percula
ENSONIG00000017169	ern1	98	93.538	ENSATEG00000024468	ern1	87	93.538	Anabas_testudineus
ENSONIG00000017169	ern1	98	97.246	ENSACLG00000027919	ern1	89	96.038	Astatotilapia_calliptera
ENSONIG00000017169	ern1	99	84.079	ENSAMXG00000000944	ern1	92	84.079	Astyanax_mexicanus
ENSONIG00000017169	ern1	97	90.977	ENSCSEG00000014500	ern1	92	90.977	Cynoglossus_semilaevis
ENSONIG00000017169	ern1	98	89.779	ENSCVAG00000002988	ern1	91	89.507	Cyprinodon_variegatus
ENSONIG00000017169	ern1	99	81.733	ENSDARG00000013997	ern1	98	82.019	Danio_rerio
ENSONIG00000017169	ern1	98	81.470	ENSELUG00000005957	ern1	92	81.470	Esox_lucius
ENSONIG00000017169	ern1	98	90.572	ENSFHEG00000005578	ern1	89	90.572	Fundulus_heteroclitus
ENSONIG00000017169	ern1	97	86.809	ENSGMOG00000011232	ern1	100	86.809	Gadus_morhua
ENSONIG00000017169	ern1	99	90.063	ENSGAFG00000020231	ern1	93	88.404	Gambusia_affinis
ENSONIG00000017169	ern1	97	90.745	ENSGACG00000011700	ern1	97	90.745	Gasterosteus_aculeatus
ENSONIG00000017169	ern1	98	97.146	ENSHBUG00000012581	ern1	88	97.146	Haplochromis_burtoni
ENSONIG00000017169	ern1	98	89.357	ENSHCOG00000016199	ern1	90	90.288	Hippocampus_comes
ENSONIG00000017169	ern1	99	83.247	ENSIPUG00000011083	ern1	92	83.247	Ictalurus_punctatus
ENSONIG00000017169	ern1	97	90.512	ENSKMAG00000019499	ern1	87	90.223	Kryptolebias_marmoratus
ENSONIG00000017169	ern1	98	89.053	ENSLBEG00000025907	ern1	88	89.053	Labrus_bergylta
ENSONIG00000017169	ern1	98	92.479	ENSMAMG00000023439	ern1	89	92.381	Mastacembelus_armatus
ENSONIG00000017169	ern1	98	97.246	ENSMZEG00005003221	ern1	87	97.246	Maylandia_zebra
ENSONIG00000017169	ern1	99	89.501	ENSMMOG00000007650	ern1	96	89.501	Mola_mola
ENSONIG00000017169	ern1	98	91.949	ENSMALG00000017775	ern1	87	91.949	Monopterus_albus
ENSONIG00000017169	ern1	98	97.146	ENSNBRG00000002179	ern1	89	97.146	Neolamprologus_brichardi
ENSONIG00000017169	ern1	99	89.540	ENSORLG00000008940	ern1	89	89.540	Oryzias_latipes
ENSONIG00000017169	ern1	99	89.540	ENSORLG00020018387	ern1	89	89.540	Oryzias_latipes_hni
ENSONIG00000017169	ern1	98	90.350	ENSORLG00015007946	ern1	88	90.350	Oryzias_latipes_hsok
ENSONIG00000017169	ern1	99	89.540	ENSOMEG00000011741	ern1	89	89.540	Oryzias_melastigma
ENSONIG00000017169	ern1	97	82.839	ENSPKIG00000005593	ern1	95	82.839	Paramormyrops_kingsleyae
ENSONIG00000017169	ern1	99	88.693	ENSPMGG00000020442	ern1	92	90.329	Periophthalmus_magnuspinnatus
ENSONIG00000017169	ern1	99	90.377	ENSPFOG00000007378	ern1	90	90.377	Poecilia_formosa
ENSONIG00000017169	ern1	99	90.377	ENSPLAG00000014780	ern1	90	91.314	Poecilia_latipinna
ENSONIG00000017169	ern1	99	90.481	ENSPMEG00000016324	ern1	90	90.481	Poecilia_mexicana
ENSONIG00000017169	ern1	99	89.854	ENSPREG00000006286	ern1	90	89.854	Poecilia_reticulata
ENSONIG00000017169	ern1	98	97.246	ENSPNYG00000017929	ern1	91	97.246	Pundamilia_nyererei
ENSONIG00000017169	ern1	97	84.884	ENSPNAG00000029447	ern1	91	85.095	Pygocentrus_nattereri
ENSONIG00000017169	ern1	98	91.102	ENSSMAG00000015042	ern1	87	91.102	Scophthalmus_maximus
ENSONIG00000017169	ern1	98	94.174	ENSSDUG00000009098	ern1	86	94.174	Seriola_dumerili
ENSONIG00000017169	ern1	98	93.856	ENSSLDG00000023254	ern1	86	93.856	Seriola_lalandi_dorsalis
ENSONIG00000017169	ern1	98	93.637	ENSSPAG00000017539	ern1	89	93.637	Stegastes_partitus
ENSONIG00000017169	ern1	96	90.753	ENSTRUG00000001041	ern1	90	90.753	Takifugu_rubripes
ENSONIG00000017169	ern1	97	90.608	ENSTNIG00000017990	ern1	98	90.542	Tetraodon_nigroviridis
ENSONIG00000017169	ern1	98	91.314	ENSXCOG00000010330	ern1	93	91.314	Xiphophorus_couchianus
ENSONIG00000017169	ern1	99	90.167	ENSXMAG00000001310	ern1	90	90.167	Xiphophorus_maculatus