EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSONIG00000017278 (Gene tree)
Gene ID: 100698341
Gene Symbol: sar1b
Alias: -
Full Name: secretion associated Ras related GTPase 1B
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Minus strand
Length: 5908 bases
Position: chrGL831235.1:1446388-1452295
Accession: 100698341
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000021792	MMR_HSR1	PF01926.23	3.8e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000021811	-	597	-	ENSONIP00000021792	198 (aa)	XP_003451489	I3KKZ7

Gene Model

Click here to download ENSONIG00000017278's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000017278's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSONIG00000017278	sar1b	86	33.140	ENSONIG00000003641	-	69	33.140
ENSONIG00000017278	sar1b	88	30.857	ENSONIG00000004340	-	91	30.857
ENSONIG00000017278	sar1b	86	30.233	ENSONIG00000017639	arl11	91	30.233
ENSONIG00000017278	sar1b	68	32.624	ENSONIG00000021039	arl4ca	69	32.624
ENSONIG00000017278	sar1b	58	35.294	ENSONIG00000020477	arl4aa	60	35.294
ENSONIG00000017278	sar1b	100	80.808	ENSONIG00000018509	sar1ab	100	80.808
ENSONIG00000017278	sar1b	87	30.233	ENSONIG00000007594	arf5	89	30.233
ENSONIG00000017278	sar1b	86	31.461	ENSONIG00000003403	ARL4D	82	31.461
ENSONIG00000017278	sar1b	86	31.818	ENSONIG00000021238	arl4d	82	31.818
ENSONIG00000017278	sar1b	94	30.000	ENSONIG00000003098	ARL6	96	30.000
ENSONIG00000017278	sar1b	87	30.058	ENSONIG00000014890	-	89	30.058
ENSONIG00000017278	sar1b	64	33.333	ENSONIG00000021291	-	66	33.333
ENSONIG00000017278	sar1b	66	38.346	ENSONIG00000000864	-	83	38.346
ENSONIG00000017278	sar1b	100	83.500	ENSONIG00000016100	-	100	83.500
ENSONIG00000017278	sar1b	94	30.319	ENSONIG00000013045	arl3l2	94	30.319
ENSONIG00000017278	sar1b	72	34.965	ENSONIG00000013539	arl2	78	34.965
ENSONIG00000017278	sar1b	92	30.435	ENSONIG00000009921	arl1	94	30.435

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000017278	sar1b	100	85.354	ENSAPOG00000017891	-	100	85.354	Acanthochromis_polyacanthus
ENSONIG00000017278	sar1b	100	95.455	ENSAPOG00000007186	sar1b	100	95.455	Acanthochromis_polyacanthus
ENSONIG00000017278	sar1b	100	83.838	ENSACIG00000024513	-	100	83.838	Amphilophus_citrinellus
ENSONIG00000017278	sar1b	100	99.495	ENSACIG00000013634	sar1b	100	99.495	Amphilophus_citrinellus
ENSONIG00000017278	sar1b	100	85.354	ENSAOCG00000002627	-	100	85.354	Amphiprion_ocellaris
ENSONIG00000017278	sar1b	100	94.949	ENSAOCG00000005888	sar1b	100	94.949	Amphiprion_ocellaris
ENSONIG00000017278	sar1b	100	85.354	ENSAPEG00000019680	-	100	85.354	Amphiprion_percula
ENSONIG00000017278	sar1b	100	94.949	ENSAPEG00000022771	sar1b	100	94.949	Amphiprion_percula
ENSONIG00000017278	sar1b	100	84.343	ENSATEG00000023368	-	100	84.343	Anabas_testudineus
ENSONIG00000017278	sar1b	100	93.434	ENSATEG00000012904	sar1b	100	93.434	Anabas_testudineus
ENSONIG00000017278	sar1b	100	90.909	ENSACAG00000001470	-	100	90.909	Anolis_carolinensis
ENSONIG00000017278	sar1b	100	98.485	ENSACLG00000014649	sar1b	100	98.485	Astatotilapia_calliptera
ENSONIG00000017278	sar1b	100	84.848	ENSACLG00000005011	-	100	84.848	Astatotilapia_calliptera
ENSONIG00000017278	sar1b	100	85.859	ENSAMXG00000034192	-	91	85.859	Astyanax_mexicanus
ENSONIG00000017278	sar1b	59	91.453	ENSAMXG00000018108	sar1b	84	91.453	Astyanax_mexicanus
ENSONIG00000017278	sar1b	100	89.394	ENSCSEG00000015238	sar1b	97	89.394	Cynoglossus_semilaevis
ENSONIG00000017278	sar1b	100	85.354	ENSCSEG00000016976	-	100	85.354	Cynoglossus_semilaevis
ENSONIG00000017278	sar1b	100	94.444	ENSCVAG00000022959	sar1b	100	94.444	Cyprinodon_variegatus
ENSONIG00000017278	sar1b	100	94.949	ENSDARG00000103403	sar1b	100	94.949	Danio_rerio
ENSONIG00000017278	sar1b	99	70.408	FBgn0038947	Sar1	99	70.408	Drosophila_melanogaster
ENSONIG00000017278	sar1b	98	89.175	ENSEBUG00000011723	sar1b	98	89.175	Eptatretus_burgeri
ENSONIG00000017278	sar1b	100	93.939	ENSELUG00000020912	sar1b	100	93.939	Esox_lucius
ENSONIG00000017278	sar1b	100	93.434	ENSFHEG00000019865	sar1b	100	93.434	Fundulus_heteroclitus
ENSONIG00000017278	sar1b	100	92.929	ENSGMOG00000008023	sar1b	100	92.929	Gadus_morhua
ENSONIG00000017278	sar1b	100	92.929	ENSGAFG00000007081	sar1b	100	92.929	Gambusia_affinis
ENSONIG00000017278	sar1b	100	91.919	ENSGACG00000001474	sar1b	100	91.919	Gasterosteus_aculeatus
ENSONIG00000017278	sar1b	100	84.848	ENSHBUG00000018397	-	100	84.848	Haplochromis_burtoni
ENSONIG00000017278	sar1b	100	98.485	ENSHBUG00000000915	sar1b	100	98.485	Haplochromis_burtoni
ENSONIG00000017278	sar1b	100	93.939	ENSHCOG00000010953	sar1b	100	93.939	Hippocampus_comes
ENSONIG00000017278	sar1b	100	92.424	ENSIPUG00000020925	sar1b	100	92.424	Ictalurus_punctatus
ENSONIG00000017278	sar1b	100	85.354	ENSIPUG00000010046	sar1b	100	85.354	Ictalurus_punctatus
ENSONIG00000017278	sar1b	100	83.333	ENSKMAG00000014875	-	100	83.333	Kryptolebias_marmoratus
ENSONIG00000017278	sar1b	100	94.444	ENSKMAG00000019693	sar1b	100	94.444	Kryptolebias_marmoratus
ENSONIG00000017278	sar1b	100	85.859	ENSLBEG00000016945	-	100	85.859	Labrus_bergylta
ENSONIG00000017278	sar1b	100	89.394	ENSLBEG00000027550	sar1b	100	89.394	Labrus_bergylta
ENSONIG00000017278	sar1b	100	87.879	ENSLACG00000010795	sar1b	100	87.879	Latimeria_chalumnae
ENSONIG00000017278	sar1b	100	74.874	ENSLACG00000017029	-	100	74.874	Latimeria_chalumnae
ENSONIG00000017278	sar1b	100	93.434	ENSLOCG00000010197	sar1b	100	93.434	Lepisosteus_oculatus
ENSONIG00000017278	sar1b	100	91.414	ENSLOCG00000005214	-	100	91.414	Lepisosteus_oculatus
ENSONIG00000017278	sar1b	100	93.434	ENSMAMG00000021732	sar1b	100	93.434	Mastacembelus_armatus
ENSONIG00000017278	sar1b	100	84.848	ENSMZEG00005001012	-	100	84.848	Maylandia_zebra
ENSONIG00000017278	sar1b	100	98.485	ENSMZEG00005008942	sar1b	100	98.485	Maylandia_zebra
ENSONIG00000017278	sar1b	90	93.855	ENSMGAG00000005387	-	91	93.855	Meleagris_gallopavo
ENSONIG00000017278	sar1b	100	84.343	ENSMMOG00000013803	-	100	84.343	Mola_mola
ENSONIG00000017278	sar1b	100	93.434	ENSMALG00000016635	sar1b	97	93.407	Monopterus_albus
ENSONIG00000017278	sar1b	100	98.990	ENSNBRG00000008013	sar1b	100	98.990	Neolamprologus_brichardi
ENSONIG00000017278	sar1b	100	84.848	ENSNBRG00000014004	-	100	84.848	Neolamprologus_brichardi
ENSONIG00000017278	sar1b	100	93.434	ENSORLG00000000932	sar1b	100	93.434	Oryzias_latipes
ENSONIG00000017278	sar1b	100	93.434	ENSORLG00020021985	sar1b	100	93.434	Oryzias_latipes_hni
ENSONIG00000017278	sar1b	100	93.434	ENSORLG00015007044	sar1b	100	93.434	Oryzias_latipes_hsok
ENSONIG00000017278	sar1b	100	93.939	ENSOMEG00000001052	sar1b	100	93.939	Oryzias_melastigma
ENSONIG00000017278	sar1b	100	92.929	ENSPKIG00000017353	-	100	92.929	Paramormyrops_kingsleyae
ENSONIG00000017278	sar1b	100	92.424	ENSPKIG00000010688	sar1b	100	92.424	Paramormyrops_kingsleyae
ENSONIG00000017278	sar1b	59	94.828	ENSPMGG00000001234	sar1b	91	94.828	Periophthalmus_magnuspinnatus
ENSONIG00000017278	sar1b	100	85.572	ENSPMAG00000003593	sar1b	100	85.572	Petromyzon_marinus
ENSONIG00000017278	sar1b	100	92.929	ENSPFOG00000005666	sar1b	100	92.929	Poecilia_formosa
ENSONIG00000017278	sar1b	100	93.434	ENSPLAG00000012223	sar1b	100	93.434	Poecilia_latipinna
ENSONIG00000017278	sar1b	59	86.325	ENSPLAG00000001016	-	75	86.325	Poecilia_latipinna
ENSONIG00000017278	sar1b	100	92.929	ENSPMEG00000016831	sar1b	100	92.929	Poecilia_mexicana
ENSONIG00000017278	sar1b	100	92.929	ENSPREG00000005312	sar1b	90	92.929	Poecilia_reticulata
ENSONIG00000017278	sar1b	60	85.593	ENSPREG00000002020	-	87	85.593	Poecilia_reticulata
ENSONIG00000017278	sar1b	100	84.848	ENSPNYG00000021357	-	100	84.848	Pundamilia_nyererei
ENSONIG00000017278	sar1b	100	98.485	ENSPNYG00000012440	sar1b	100	98.485	Pundamilia_nyererei
ENSONIG00000017278	sar1b	100	93.939	ENSPNAG00000014683	sar1b	100	93.939	Pygocentrus_nattereri
ENSONIG00000017278	sar1b	100	86.869	ENSPNAG00000001123	-	100	86.869	Pygocentrus_nattereri
ENSONIG00000017278	sar1b	100	93.434	ENSSFOG00015020051	sar1b	100	93.434	Scleropages_formosus
ENSONIG00000017278	sar1b	100	92.424	ENSSFOG00015018128	-	100	92.424	Scleropages_formosus
ENSONIG00000017278	sar1b	100	92.929	ENSSMAG00000007106	sar1b	80	92.929	Scophthalmus_maximus
ENSONIG00000017278	sar1b	100	85.859	ENSSMAG00000002165	-	100	85.859	Scophthalmus_maximus
ENSONIG00000017278	sar1b	100	95.960	ENSSDUG00000020926	sar1b	100	95.960	Seriola_dumerili
ENSONIG00000017278	sar1b	100	84.848	ENSSDUG00000019629	-	100	84.848	Seriola_dumerili
ENSONIG00000017278	sar1b	100	95.960	ENSSLDG00000017052	sar1b	100	95.960	Seriola_lalandi_dorsalis
ENSONIG00000017278	sar1b	100	84.848	ENSSLDG00000024197	-	100	84.848	Seriola_lalandi_dorsalis
ENSONIG00000017278	sar1b	100	91.919	ENSSPUG00000010247	-	100	91.919	Sphenodon_punctatus
ENSONIG00000017278	sar1b	100	95.455	ENSSPAG00000017634	sar1b	100	95.455	Stegastes_partitus
ENSONIG00000017278	sar1b	100	84.848	ENSSPAG00000015626	-	100	84.848	Stegastes_partitus
ENSONIG00000017278	sar1b	100	88.889	ENSTRUG00000023908	sar1b	100	88.889	Takifugu_rubripes
ENSONIG00000017278	sar1b	100	90.404	ENSTNIG00000016097	sar1b	100	90.404	Tetraodon_nigroviridis
ENSONIG00000017278	sar1b	90	93.820	ENSXCOG00000004160	sar1b	87	93.820	Xiphophorus_couchianus
ENSONIG00000017278	sar1b	61	83.333	ENSXCOG00000006154	-	81	83.333	Xiphophorus_couchianus
ENSONIG00000017278	sar1b	100	92.929	ENSXMAG00000008294	sar1b	100	92.929	Xiphophorus_maculatus