EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSONIG00000017308 (Gene tree)
Gene ID: 109194181
Gene Symbol: larp1
Alias: -
Full Name: La ribonucleoprotein domain family%2C member 1
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Minus strand
Length: 45002 bases
Position: chrGL831235.1:1815270-1860271
Accession: ZDB-GENE-030131-5386
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000021827	La	PF05383.17	1.2e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000021846	-	3270	-	ENSONIP00000021827	1090 (aa)	-	I3KL32

Gene Model

Click here to download ENSONIG00000017308's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000017308's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSONIG00000017308	larp1	88	54.390	ENSONIG00000012386	larp1b	99	54.813

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000017308	larp1	87	70.042	ENSG00000155506	LARP1	90	81.818	Homo_sapiens
ENSONIG00000017308	larp1	88	97.696	ENSAPOG00000020685	larp1	99	97.696	Acanthochromis_polyacanthus
ENSONIG00000017308	larp1	87	70.312	ENSAMEG00000016673	LARP1	99	70.208	Ailuropoda_melanoleuca
ENSONIG00000017308	larp1	100	81.876	ENSACIG00000012994	larp1	99	82.149	Amphilophus_citrinellus
ENSONIG00000017308	larp1	78	89.468	ENSAOCG00000007792	larp1	99	89.352	Amphiprion_ocellaris
ENSONIG00000017308	larp1	100	87.296	ENSAPEG00000022246	larp1	99	86.842	Amphiprion_percula
ENSONIG00000017308	larp1	99	84.114	ENSATEG00000013523	larp1	99	84.791	Anabas_testudineus
ENSONIG00000017308	larp1	82	73.282	ENSAPLG00000007559	LARP1	99	73.282	Anas_platyrhynchos
ENSONIG00000017308	larp1	87	71.576	ENSACAG00000004071	LARP1	97	72.433	Anolis_carolinensis
ENSONIG00000017308	larp1	87	69.833	ENSANAG00000029949	LARP1	99	67.360	Aotus_nancymaae
ENSONIG00000017308	larp1	100	93.088	ENSACLG00000015256	larp1	99	93.147	Astatotilapia_calliptera
ENSONIG00000017308	larp1	97	76.648	ENSAMXG00000000859	larp1	98	75.537	Astyanax_mexicanus
ENSONIG00000017308	larp1	97	66.204	ENSBTAG00000008443	LARP1	99	64.685	Bos_taurus
ENSONIG00000017308	larp1	99	65.492	ENSCJAG00000004454	LARP1	99	65.277	Callithrix_jacchus
ENSONIG00000017308	larp1	87	70.104	ENSCAFG00000017639	LARP1	99	70.000	Canis_familiaris
ENSONIG00000017308	larp1	81	71.461	ENSCAFG00020023860	LARP1	98	71.348	Canis_lupus_dingo
ENSONIG00000017308	larp1	97	66.385	ENSCHIG00000014414	LARP1	99	63.282	Capra_hircus
ENSONIG00000017308	larp1	87	70.324	ENSTSYG00000013732	LARP1	98	67.782	Carlito_syrichta
ENSONIG00000017308	larp1	76	71.002	ENSCAPG00000013865	LARP1	86	70.331	Cavia_aperea
ENSONIG00000017308	larp1	85	71.337	ENSCPOG00000003377	LARP1	99	70.146	Cavia_porcellus
ENSONIG00000017308	larp1	99	65.190	ENSCCAG00000025201	LARP1	99	65.186	Cebus_capucinus
ENSONIG00000017308	larp1	99	63.282	ENSCATG00000030675	LARP1	99	63.249	Cercocebus_atys
ENSONIG00000017308	larp1	87	70.301	ENSCLAG00000012755	LARP1	99	68.717	Chinchilla_lanigera
ENSONIG00000017308	larp1	81	68.771	ENSCSAG00000010800	LARP1	98	68.884	Chlorocebus_sabaeus
ENSONIG00000017308	larp1	84	66.038	ENSCHOG00000012716	LARP1	90	65.939	Choloepus_hoffmanni
ENSONIG00000017308	larp1	91	71.687	ENSCPBG00000002173	LARP1	93	72.112	Chrysemys_picta_bellii
ENSONIG00000017308	larp1	90	68.278	ENSCANG00000037418	LARP1	92	70.042	Colobus_angolensis_palliatus
ENSONIG00000017308	larp1	99	66.026	ENSCGRG00001016913	Larp1	99	65.725	Cricetulus_griseus_chok1gshd
ENSONIG00000017308	larp1	84	67.603	ENSCGRG00000009916	Larp1	99	67.603	Cricetulus_griseus_crigri
ENSONIG00000017308	larp1	99	85.910	ENSCSEG00000016431	larp1	99	85.018	Cynoglossus_semilaevis
ENSONIG00000017308	larp1	99	82.724	ENSCVAG00000022687	larp1	99	83.816	Cyprinodon_variegatus
ENSONIG00000017308	larp1	99	67.769	ENSDARG00000101722	larp1	95	72.442	Danio_rerio
ENSONIG00000017308	larp1	99	64.955	ENSDNOG00000012073	LARP1	99	64.674	Dasypus_novemcinctus
ENSONIG00000017308	larp1	87	66.528	ENSDORG00000002897	Larp1	97	67.503	Dipodomys_ordii
ENSONIG00000017308	larp1	81	71.942	ENSETEG00000020251	LARP1	100	71.717	Echinops_telfairi
ENSONIG00000017308	larp1	99	64.775	ENSEASG00005001070	LARP1	99	64.828	Equus_asinus_asinus
ENSONIG00000017308	larp1	99	64.775	ENSECAG00000017002	LARP1	78	65.964	Equus_caballus
ENSONIG00000017308	larp1	86	66.490	ENSEEUG00000001065	LARP1	99	67.093	Erinaceus_europaeus
ENSONIG00000017308	larp1	99	77.347	ENSELUG00000019403	larp1	99	76.923	Esox_lucius
ENSONIG00000017308	larp1	99	65.312	ENSFCAG00000000592	LARP1	99	65.312	Felis_catus
ENSONIG00000017308	larp1	77	73.286	ENSFALG00000008335	LARP1	99	71.158	Ficedula_albicollis
ENSONIG00000017308	larp1	87	69.937	ENSFDAG00000021125	LARP1	99	69.729	Fukomys_damarensis
ENSONIG00000017308	larp1	64	78.531	ENSFHEG00000020307	larp1	97	77.966	Fundulus_heteroclitus
ENSONIG00000017308	larp1	99	67.369	ENSGALG00000040109	LARP1	97	70.994	Gallus_gallus
ENSONIG00000017308	larp1	99	68.608	ENSGAGG00000025113	LARP1	98	72.747	Gopherus_agassizii
ENSONIG00000017308	larp1	89	69.199	ENSGGOG00000006048	LARP1	94	69.097	Gorilla_gorilla
ENSONIG00000017308	larp1	100	93.841	ENSHBUG00000020762	larp1	99	93.750	Haplochromis_burtoni
ENSONIG00000017308	larp1	99	65.150	ENSHGLG00000006267	LARP1	99	64.344	Heterocephalus_glaber_female
ENSONIG00000017308	larp1	87	70.000	ENSHGLG00100014230	-	99	69.792	Heterocephalus_glaber_male
ENSONIG00000017308	larp1	88	59.855	ENSHGLG00100003395	-	90	59.045	Heterocephalus_glaber_male
ENSONIG00000017308	larp1	90	92.961	ENSHCOG00000010786	larp1	99	92.961	Hippocampus_comes
ENSONIG00000017308	larp1	88	75.466	ENSIPUG00000019105	Larp1	94	76.452	Ictalurus_punctatus
ENSONIG00000017308	larp1	87	67.816	ENSSTOG00000005678	LARP1	98	67.816	Ictidomys_tridecemlineatus
ENSONIG00000017308	larp1	99	60.874	ENSJJAG00000016950	Larp1	99	60.965	Jaculus_jaculus
ENSONIG00000017308	larp1	99	83.938	ENSKMAG00000018468	larp1	99	85.091	Kryptolebias_marmoratus
ENSONIG00000017308	larp1	99	83.287	ENSLBEG00000027172	larp1	99	83.258	Labrus_bergylta
ENSONIG00000017308	larp1	94	76.019	ENSLOCG00000012457	larp1	99	75.584	Lepisosteus_oculatus
ENSONIG00000017308	larp1	99	64.384	ENSLAFG00000008991	LARP1	99	63.869	Loxodonta_africana
ENSONIG00000017308	larp1	87	69.937	ENSMFAG00000031651	LARP1	92	69.833	Macaca_fascicularis
ENSONIG00000017308	larp1	87	67.435	ENSMMUG00000009411	LARP1	99	67.539	Macaca_mulatta
ENSONIG00000017308	larp1	83	70.297	ENSMNEG00000039294	LARP1	98	71.171	Macaca_nemestrina
ENSONIG00000017308	larp1	87	70.042	ENSMLEG00000035142	LARP1	92	69.937	Mandrillus_leucophaeus
ENSONIG00000017308	larp1	99	85.265	ENSMAMG00000021788	larp1	99	84.802	Mastacembelus_armatus
ENSONIG00000017308	larp1	100	93.088	ENSMZEG00005009345	larp1	99	93.147	Maylandia_zebra
ENSONIG00000017308	larp1	87	70.954	ENSMGAG00000005696	LARP1	99	70.851	Meleagris_gallopavo
ENSONIG00000017308	larp1	99	65.659	ENSMAUG00000001385	Larp1	99	65.599	Mesocricetus_auratus
ENSONIG00000017308	larp1	89	68.168	ENSMICG00000000837	LARP1	98	75.337	Microcebus_murinus
ENSONIG00000017308	larp1	99	66.026	ENSMOCG00000008920	Larp1	99	65.693	Microtus_ochrogaster
ENSONIG00000017308	larp1	95	66.071	ENSMMOG00000013364	larp1	98	73.896	Mola_mola
ENSONIG00000017308	larp1	87	69.637	ENSMODG00000008663	LARP1	98	69.637	Monodelphis_domestica
ENSONIG00000017308	larp1	100	83.498	ENSMALG00000017180	larp1	96	86.173	Monopterus_albus
ENSONIG00000017308	larp1	99	65.568	MGP_CAROLIEiJ_G0016383	Larp1	99	65.845	Mus_caroli
ENSONIG00000017308	larp1	99	65.659	ENSMUSG00000037331	Larp1	99	65.936	Mus_musculus
ENSONIG00000017308	larp1	99	65.814	MGP_PahariEiJ_G0017518	Larp1	99	65.876	Mus_pahari
ENSONIG00000017308	larp1	99	65.874	MGP_SPRETEiJ_G0017225	Larp1	99	65.936	Mus_spretus
ENSONIG00000017308	larp1	82	63.449	ENSMPUG00000013564	LARP1	99	62.991	Mustela_putorius_furo
ENSONIG00000017308	larp1	87	66.805	ENSMLUG00000002608	LARP1	99	66.909	Myotis_lucifugus
ENSONIG00000017308	larp1	87	67.223	ENSNGAG00000001098	Larp1	98	67.048	Nannospalax_galili
ENSONIG00000017308	larp1	91	92.339	ENSNBRG00000008963	larp1	98	92.339	Neolamprologus_brichardi
ENSONIG00000017308	larp1	90	67.136	ENSNLEG00000016588	LARP1	98	66.910	Nomascus_leucogenys
ENSONIG00000017308	larp1	87	66.143	ENSMEUG00000002957	LARP1	99	66.143	Notamacropus_eugenii
ENSONIG00000017308	larp1	87	70.324	ENSOPRG00000013014	LARP1	99	70.115	Ochotona_princeps
ENSONIG00000017308	larp1	88	69.342	ENSODEG00000010824	LARP1	99	69.937	Octodon_degus
ENSONIG00000017308	larp1	90	70.071	ENSOANG00000005096	LARP1	99	70.000	Ornithorhynchus_anatinus
ENSONIG00000017308	larp1	99	65.608	ENSOCUG00000013066	LARP1	99	65.511	Oryctolagus_cuniculus
ENSONIG00000017308	larp1	100	81.000	ENSORLG00000000824	larp1	99	83.412	Oryzias_latipes
ENSONIG00000017308	larp1	100	80.909	ENSORLG00020022241	larp1	99	80.909	Oryzias_latipes_hni
ENSONIG00000017308	larp1	100	79.727	ENSORLG00015007538	larp1	99	80.909	Oryzias_latipes_hsok
ENSONIG00000017308	larp1	100	80.182	ENSOMEG00000003134	larp1	99	80.199	Oryzias_melastigma
ENSONIG00000017308	larp1	87	70.000	ENSOGAG00000016750	LARP1	99	69.937	Otolemur_garnettii
ENSONIG00000017308	larp1	84	69.828	ENSOARG00000009893	LARP1	99	67.913	Ovis_aries
ENSONIG00000017308	larp1	87	70.042	ENSPPAG00000042993	LARP1	92	69.937	Pan_paniscus
ENSONIG00000017308	larp1	87	68.919	ENSPPRG00000009780	LARP1	93	68.196	Panthera_pardus
ENSONIG00000017308	larp1	87	69.030	ENSPTIG00000007013	LARP1	93	68.717	Panthera_tigris_altaica
ENSONIG00000017308	larp1	99	63.324	ENSPTRG00000017447	LARP1	99	63.249	Pan_troglodytes
ENSONIG00000017308	larp1	99	63.282	ENSPANG00000008080	LARP1	99	63.249	Papio_anubis
ENSONIG00000017308	larp1	96	77.589	ENSPKIG00000010096	larp1	99	76.734	Paramormyrops_kingsleyae
ENSONIG00000017308	larp1	99	67.495	ENSPKIG00000017153	-	99	68.569	Paramormyrops_kingsleyae
ENSONIG00000017308	larp1	94	79.337	ENSPMGG00000011599	larp1	98	78.578	Periophthalmus_magnuspinnatus
ENSONIG00000017308	larp1	87	67.360	ENSPEMG00000022523	Larp1	98	67.500	Peromyscus_maniculatus_bairdii
ENSONIG00000017308	larp1	97	67.542	ENSPCIG00000019242	LARP1	89	67.166	Phascolarctos_cinereus
ENSONIG00000017308	larp1	97	82.597	ENSPFOG00000005836	larp1	99	80.610	Poecilia_formosa
ENSONIG00000017308	larp1	97	83.458	ENSPLAG00000008936	larp1	99	81.603	Poecilia_latipinna
ENSONIG00000017308	larp1	97	82.136	ENSPMEG00000013656	larp1	99	80.323	Poecilia_mexicana
ENSONIG00000017308	larp1	87	82.787	ENSPREG00000005726	larp1	98	82.992	Poecilia_reticulata
ENSONIG00000017308	larp1	86	67.647	ENSPCAG00000006407	LARP1	98	67.437	Procavia_capensis
ENSONIG00000017308	larp1	87	62.591	ENSPCOG00000016949	LARP1	99	65.204	Propithecus_coquereli
ENSONIG00000017308	larp1	97	65.899	ENSPVAG00000002262	LARP1	99	64.892	Pteropus_vampyrus
ENSONIG00000017308	larp1	100	93.268	ENSPNYG00000007938	larp1	99	93.327	Pundamilia_nyererei
ENSONIG00000017308	larp1	99	73.708	ENSPNAG00000021427	larp1	99	74.794	Pygocentrus_nattereri
ENSONIG00000017308	larp1	87	67.432	ENSRNOG00000031544	Larp1	98	67.432	Rattus_norvegicus
ENSONIG00000017308	larp1	90	68.177	ENSRBIG00000038005	LARP1	92	69.937	Rhinopithecus_bieti
ENSONIG00000017308	larp1	90	68.177	ENSRROG00000034073	LARP1	98	71.445	Rhinopithecus_roxellana
ENSONIG00000017308	larp1	90	68.342	ENSSBOG00000019816	LARP1	99	67.503	Saimiri_boliviensis_boliviensis
ENSONIG00000017308	larp1	87	70.907	ENSSHAG00000011115	LARP1	99	70.907	Sarcophilus_harrisii
ENSONIG00000017308	larp1	99	72.157	ENSSFOG00015018058	-	99	72.084	Scleropages_formosus
ENSONIG00000017308	larp1	86	78.542	ENSSFOG00015020304	larp1	93	77.938	Scleropages_formosus
ENSONIG00000017308	larp1	94	86.033	ENSSMAG00000007468	larp1	98	87.197	Scophthalmus_maximus
ENSONIG00000017308	larp1	100	86.767	ENSSDUG00000000268	larp1	99	86.146	Seriola_dumerili
ENSONIG00000017308	larp1	82	86.226	ENSSLDG00000016505	larp1	99	85.538	Seriola_lalandi_dorsalis
ENSONIG00000017308	larp1	56	78.169	ENSSARG00000013907	-	88	78.521	Sorex_araneus
ENSONIG00000017308	larp1	100	86.984	ENSSPAG00000003910	larp1	99	86.625	Stegastes_partitus
ENSONIG00000017308	larp1	97	65.712	ENSSSCG00000017069	LARP1	99	70.379	Sus_scrofa
ENSONIG00000017308	larp1	84	72.698	ENSTGUG00000000704	LARP1	100	72.914	Taeniopygia_guttata
ENSONIG00000017308	larp1	99	83.668	ENSTRUG00000009470	larp1	99	83.303	Takifugu_rubripes
ENSONIG00000017308	larp1	82	69.832	ENSTBEG00000003381	LARP1	99	69.609	Tupaia_belangeri
ENSONIG00000017308	larp1	86	69.401	ENSTTRG00000015934	LARP1	99	69.502	Tursiops_truncatus
ENSONIG00000017308	larp1	99	65.162	ENSUAMG00000019334	LARP1	99	65.041	Ursus_americanus
ENSONIG00000017308	larp1	86	68.454	ENSUMAG00000002934	LARP1	98	68.454	Ursus_maritimus
ENSONIG00000017308	larp1	81	71.461	ENSVVUG00000004644	LARP1	98	71.348	Vulpes_vulpes
ENSONIG00000017308	larp1	92	70.734	ENSXETG00000008413	larp1	93	71.530	Xenopus_tropicalis
ENSONIG00000017308	larp1	84	84.553	ENSXCOG00000004022	larp1	97	84.532	Xiphophorus_couchianus
ENSONIG00000017308	larp1	97	81.935	ENSXMAG00000018780	larp1	99	80.036	Xiphophorus_maculatus