EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: ENSONIG00000017378 (Gene tree)
Gene ID: 100695192
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Minus strand
Length: 20320 bases
Position: chrGL831137.1:8105227-8125546
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000021916	KH_1	PF00013.29	2.4e-51	1	3
ENSONIP00000021916	KH_1	PF00013.29	2.4e-51	2	3
ENSONIP00000021916	KH_1	PF00013.29	2.4e-51	3	3
ENSONIP00000021916	KH_2	PF07650.17	2e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000021935	-	1272	-	ENSONIP00000021916	423 (aa)	-	I3KLC1

Gene Model

Click here to download ENSONIG00000017378's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000017378's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSONIG00000017378	-	69	32.857	ENSONIG00000009029	igf2bp2b	68	32.857
ENSONIG00000017378	-	77	41.538	ENSONIG00000015810	nova1	51	41.538
ENSONIG00000017378	-	74	64.286	ENSONIG00000005135	PCBP2	98	64.286
ENSONIG00000017378	-	71	60.350	ENSONIG00000012122	-	95	60.058
ENSONIG00000017378	-	55	50.769	ENSONIG00000007565	hnrpkl	55	50.769
ENSONIG00000017378	-	74	65.176	ENSONIG00000017003	pcbp2	98	65.176
ENSONIG00000017378	-	70	30.769	ENSONIG00000004506	igf2bp3	62	30.769
ENSONIG00000017378	-	70	36.111	ENSONIG00000002861	fubp3	58	36.111
ENSONIG00000017378	-	70	41.667	ENSONIG00000018381	fubp1	52	41.667
ENSONIG00000017378	-	74	66.038	ENSONIG00000004611	-	97	66.038
ENSONIG00000017378	-	100	77.958	ENSONIG00000018552	pcbp4	99	78.654
ENSONIG00000017378	-	55	48.485	ENSONIG00000015002	hnrnpk	54	48.485
ENSONIG00000017378	-	99	58.824	ENSONIG00000010370	zgc:110045	99	58.118
ENSONIG00000017378	-	70	35.135	ENSONIG00000002163	KHSRP	56	35.135