EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSONIG00000017406 (Gene tree)
Gene ID: 100696507
Gene Symbol: prpf6
Alias: -
Full Name: pre-mRNA processing factor 6
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Plus strand
Length: 10640 bases
Position: chrGL831137.1:8797591-8808230
Accession: 100696507
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000021952	PRP1_N	PF06424.12	1.4e-57	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000021971	-	3018	-	ENSONIP00000021952	969 (aa)	XP_003439073	I3KLF7

Gene Model

Click here to download ENSONIG00000017406's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000017406's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000017406	prpf6	96	92.349	ENSG00000101161	PRPF6	100	91.923	Homo_sapiens
ENSONIG00000017406	prpf6	100	98.349	ENSAPOG00000010395	prpf6	100	98.349	Acanthochromis_polyacanthus
ENSONIG00000017406	prpf6	96	91.720	ENSAMEG00000001916	PRPF6	99	91.295	Ailuropoda_melanoleuca
ENSONIG00000017406	prpf6	100	99.174	ENSACIG00000019862	prpf6	100	99.174	Amphilophus_citrinellus
ENSONIG00000017406	prpf6	100	98.452	ENSAOCG00000012988	prpf6	100	98.452	Amphiprion_ocellaris
ENSONIG00000017406	prpf6	96	91.935	ENSAPEG00000008301	prpf6	100	92.151	Amphiprion_percula
ENSONIG00000017406	prpf6	100	97.936	ENSATEG00000005581	prpf6	100	97.936	Anabas_testudineus
ENSONIG00000017406	prpf6	96	92.880	ENSACAG00000006464	PRPF6	95	92.455	Anolis_carolinensis
ENSONIG00000017406	prpf6	96	92.349	ENSANAG00000012661	PRPF6	100	92.697	Aotus_nancymaae
ENSONIG00000017406	prpf6	100	99.587	ENSACLG00000025875	prpf6	100	99.587	Astatotilapia_calliptera
ENSONIG00000017406	prpf6	97	94.597	ENSAMXG00000001929	prpf6	100	92.828	Astyanax_mexicanus
ENSONIG00000017406	prpf6	96	92.667	ENSBTAG00000011656	PRPF6	100	92.242	Bos_taurus
ENSONIG00000017406	prpf6	96	92.349	ENSCJAG00000010616	PRPF6	100	91.923	Callithrix_jacchus
ENSONIG00000017406	prpf6	96	92.774	ENSCAFG00000013165	PRPF6	100	92.349	Canis_familiaris
ENSONIG00000017406	prpf6	96	92.774	ENSCAFG00020002050	PRPF6	100	92.349	Canis_lupus_dingo
ENSONIG00000017406	prpf6	96	92.667	ENSCHIG00000018187	PRPF6	100	92.242	Capra_hircus
ENSONIG00000017406	prpf6	96	92.774	ENSTSYG00000007814	PRPF6	100	92.349	Carlito_syrichta
ENSONIG00000017406	prpf6	93	91.930	ENSCAPG00000015077	PRPF6	100	91.058	Cavia_aperea
ENSONIG00000017406	prpf6	96	93.199	ENSCPOG00000007518	PRPF6	100	92.774	Cavia_porcellus
ENSONIG00000017406	prpf6	96	89.054	ENSCCAG00000024564	PRPF6	100	88.629	Cebus_capucinus
ENSONIG00000017406	prpf6	96	92.455	ENSCATG00000037473	PRPF6	100	92.030	Cercocebus_atys
ENSONIG00000017406	prpf6	96	89.479	ENSCLAG00000003854	PRPF6	100	88.948	Chinchilla_lanigera
ENSONIG00000017406	prpf6	96	87.751	ENSCSAG00000016742	PRPF6	100	87.328	Chlorocebus_sabaeus
ENSONIG00000017406	prpf6	81	77.886	ENSCHOG00000003315	-	98	77.686	Choloepus_hoffmanni
ENSONIG00000017406	prpf6	98	91.675	ENSCPBG00000013964	PRPF6	96	92.766	Chrysemys_picta_bellii
ENSONIG00000017406	prpf6	96	72.833	ENSCING00000008817	-	99	72.410	Ciona_intestinalis
ENSONIG00000017406	prpf6	96	92.242	ENSCANG00000038230	PRPF6	100	91.817	Colobus_angolensis_palliatus
ENSONIG00000017406	prpf6	96	93.199	ENSCGRG00001022666	Prpf6	100	92.774	Cricetulus_griseus_chok1gshd
ENSONIG00000017406	prpf6	96	92.581	ENSCSEG00000018561	prpf6	100	92.581	Cynoglossus_semilaevis
ENSONIG00000017406	prpf6	100	96.698	ENSCVAG00000010550	prpf6	100	96.698	Cyprinodon_variegatus
ENSONIG00000017406	prpf6	100	92.930	ENSDARG00000091367	prpf6	100	94.386	Danio_rerio
ENSONIG00000017406	prpf6	96	92.349	ENSDNOG00000040544	PRPF6	100	92.030	Dasypus_novemcinctus
ENSONIG00000017406	prpf6	87	92.407	ENSDORG00000005406	Prpf6	100	92.407	Dipodomys_ordii
ENSONIG00000017406	prpf6	96	71.613	FBgn0036828	CG6841	99	71.720	Drosophila_melanogaster
ENSONIG00000017406	prpf6	83	91.520	ENSETEG00000004447	PRPF6	85	91.520	Echinops_telfairi
ENSONIG00000017406	prpf6	96	86.349	ENSEBUG00000008835	prpf6	100	85.926	Eptatretus_burgeri
ENSONIG00000017406	prpf6	99	90.402	ENSEASG00005023115	PRPF6	100	92.242	Equus_asinus_asinus
ENSONIG00000017406	prpf6	96	88.417	ENSECAG00000013983	PRPF6	100	87.991	Equus_caballus
ENSONIG00000017406	prpf6	86	95.833	ENSEEUG00000000180	PRPF6	81	95.833	Erinaceus_europaeus
ENSONIG00000017406	prpf6	97	95.016	ENSELUG00000001945	prpf6	94	95.016	Esox_lucius
ENSONIG00000017406	prpf6	96	92.774	ENSFCAG00000001183	PRPF6	100	92.349	Felis_catus
ENSONIG00000017406	prpf6	96	92.804	ENSFALG00000010326	-	98	92.487	Ficedula_albicollis
ENSONIG00000017406	prpf6	96	86.702	ENSFALG00000006046	-	97	86.980	Ficedula_albicollis
ENSONIG00000017406	prpf6	96	91.711	ENSFDAG00000006451	PRPF6	100	92.404	Fukomys_damarensis
ENSONIG00000017406	prpf6	100	97.626	ENSFHEG00000000560	prpf6	100	97.626	Fundulus_heteroclitus
ENSONIG00000017406	prpf6	97	94.062	ENSGMOG00000015622	prpf6	99	93.531	Gadus_morhua
ENSONIG00000017406	prpf6	96	93.092	ENSGALG00000006001	PRPF6	100	92.774	Gallus_gallus
ENSONIG00000017406	prpf6	100	93.189	ENSGAFG00000021109	prpf6	100	93.189	Gambusia_affinis
ENSONIG00000017406	prpf6	97	95.763	ENSGACG00000002576	prpf6	100	95.763	Gasterosteus_aculeatus
ENSONIG00000017406	prpf6	98	91.771	ENSGAGG00000008653	PRPF6	96	92.872	Gopherus_agassizii
ENSONIG00000017406	prpf6	96	92.349	ENSGGOG00000016876	PRPF6	100	91.923	Gorilla_gorilla
ENSONIG00000017406	prpf6	100	99.587	ENSHBUG00000004496	prpf6	100	99.587	Haplochromis_burtoni
ENSONIG00000017406	prpf6	96	93.092	ENSHGLG00000009222	PRPF6	100	92.667	Heterocephalus_glaber_female
ENSONIG00000017406	prpf6	93	93.021	ENSHGLG00100016600	PRPF6	100	92.585	Heterocephalus_glaber_male
ENSONIG00000017406	prpf6	100	95.975	ENSHCOG00000011513	prpf6	100	95.975	Hippocampus_comes
ENSONIG00000017406	prpf6	100	92.813	ENSIPUG00000004912	prpf6	100	92.813	Ictalurus_punctatus
ENSONIG00000017406	prpf6	96	90.658	ENSSTOG00000002922	PRPF6	100	89.809	Ictidomys_tridecemlineatus
ENSONIG00000017406	prpf6	96	93.199	ENSJJAG00000000836	Prpf6	100	92.774	Jaculus_jaculus
ENSONIG00000017406	prpf6	100	97.936	ENSKMAG00000017800	prpf6	100	97.936	Kryptolebias_marmoratus
ENSONIG00000017406	prpf6	100	96.801	ENSLBEG00000012582	prpf6	100	96.801	Labrus_bergylta
ENSONIG00000017406	prpf6	98	92.708	ENSLOCG00000004827	prpf6	96	92.340	Lepisosteus_oculatus
ENSONIG00000017406	prpf6	96	92.455	ENSLAFG00000005272	PRPF6	100	92.030	Loxodonta_africana
ENSONIG00000017406	prpf6	96	92.242	ENSMFAG00000037542	PRPF6	100	91.817	Macaca_fascicularis
ENSONIG00000017406	prpf6	96	86.200	ENSMMUG00000015558	PRPF6	98	93.414	Macaca_mulatta
ENSONIG00000017406	prpf6	96	79.873	ENSMNEG00000045555	PRPF6	100	79.449	Macaca_nemestrina
ENSONIG00000017406	prpf6	100	97.833	ENSMAMG00000010718	prpf6	100	97.833	Mastacembelus_armatus
ENSONIG00000017406	prpf6	90	99.086	ENSMZEG00005026539	prpf6	100	99.086	Maylandia_zebra
ENSONIG00000017406	prpf6	97	99.041	ENSMZEG00005015261	-	100	99.041	Maylandia_zebra
ENSONIG00000017406	prpf6	93	93.239	ENSMGAG00000006634	PRPF6	100	92.912	Meleagris_gallopavo
ENSONIG00000017406	prpf6	96	93.199	ENSMAUG00000013969	Prpf6	100	92.774	Mesocricetus_auratus
ENSONIG00000017406	prpf6	84	91.849	ENSMICG00000017793	PRPF6	98	91.862	Microcebus_murinus
ENSONIG00000017406	prpf6	96	93.092	ENSMOCG00000001701	Prpf6	100	92.667	Microtus_ochrogaster
ENSONIG00000017406	prpf6	96	97.527	ENSMMOG00000020419	prpf6	100	97.527	Mola_mola
ENSONIG00000017406	prpf6	93	93.835	ENSMODG00000017051	PRPF6	99	93.342	Monodelphis_domestica
ENSONIG00000017406	prpf6	95	98.152	ENSMALG00000000089	prpf6	100	98.152	Monopterus_albus
ENSONIG00000017406	prpf6	96	86.929	MGP_CAROLIEiJ_G0024814	Prpf6	100	96.296	Mus_caroli
ENSONIG00000017406	prpf6	96	93.199	ENSMUSG00000002455	Prpf6	100	96.296	Mus_musculus
ENSONIG00000017406	prpf6	96	93.199	MGP_PahariEiJ_G0026262	Prpf6	100	96.296	Mus_pahari
ENSONIG00000017406	prpf6	96	93.199	MGP_SPRETEiJ_G0025741	Prpf6	100	96.296	Mus_spretus
ENSONIG00000017406	prpf6	86	92.953	ENSMPUG00000008673	PRPF6	98	92.953	Mustela_putorius_furo
ENSONIG00000017406	prpf6	96	93.305	ENSNGAG00000003365	Prpf6	100	92.880	Nannospalax_galili
ENSONIG00000017406	prpf6	100	99.690	ENSNBRG00000015025	prpf6	100	99.690	Neolamprologus_brichardi
ENSONIG00000017406	prpf6	96	92.242	ENSNLEG00000010208	PRPF6	100	91.817	Nomascus_leucogenys
ENSONIG00000017406	prpf6	96	83.735	ENSMEUG00000009824	-	90	83.992	Notamacropus_eugenii
ENSONIG00000017406	prpf6	96	87.248	ENSODEG00000004841	PRPF6	100	86.823	Octodon_degus
ENSONIG00000017406	prpf6	96	93.092	ENSOANG00000004920	PRPF6	100	92.667	Ornithorhynchus_anatinus
ENSONIG00000017406	prpf6	95	90.880	ENSOCUG00000014151	PRPF6	100	90.451	Oryctolagus_cuniculus
ENSONIG00000017406	prpf6	100	96.491	ENSORLG00000009592	prpf6	100	96.491	Oryzias_latipes
ENSONIG00000017406	prpf6	100	96.594	ENSORLG00020001458	prpf6	100	96.594	Oryzias_latipes_hni
ENSONIG00000017406	prpf6	100	96.594	ENSORLG00015018762	prpf6	100	96.594	Oryzias_latipes_hsok
ENSONIG00000017406	prpf6	100	97.007	ENSOMEG00000012174	prpf6	100	97.007	Oryzias_melastigma
ENSONIG00000017406	prpf6	96	85.987	ENSOGAG00000007573	PRPF6	100	85.563	Otolemur_garnettii
ENSONIG00000017406	prpf6	96	92.242	ENSOARG00000008776	PRPF6	99	91.817	Ovis_aries
ENSONIG00000017406	prpf6	96	92.349	ENSPPAG00000008686	PRPF6	100	91.923	Pan_paniscus
ENSONIG00000017406	prpf6	96	92.774	ENSPPRG00000008497	PRPF6	100	92.349	Panthera_pardus
ENSONIG00000017406	prpf6	93	92.694	ENSPTIG00000011184	PRPF6	97	92.257	Panthera_tigris_altaica
ENSONIG00000017406	prpf6	96	92.349	ENSPTRG00000013765	PRPF6	100	91.923	Pan_troglodytes
ENSONIG00000017406	prpf6	96	92.030	ENSPANG00000024135	PRPF6	100	91.605	Papio_anubis
ENSONIG00000017406	prpf6	98	93.555	ENSPKIG00000005627	prpf6	99	94.787	Paramormyrops_kingsleyae
ENSONIG00000017406	prpf6	90	92.744	ENSPSIG00000007717	PRPF6	100	92.290	Pelodiscus_sinensis
ENSONIG00000017406	prpf6	99	94.628	ENSPMGG00000008925	prpf6	99	93.905	Periophthalmus_magnuspinnatus
ENSONIG00000017406	prpf6	96	93.199	ENSPEMG00000016036	Prpf6	100	92.774	Peromyscus_maniculatus_bairdii
ENSONIG00000017406	prpf6	98	87.147	ENSPMAG00000006144	prpf6	100	87.777	Petromyzon_marinus
ENSONIG00000017406	prpf6	96	93.199	ENSPCIG00000017909	PRPF6	100	92.774	Phascolarctos_cinereus
ENSONIG00000017406	prpf6	100	96.626	ENSPFOG00000006431	prpf6	99	96.626	Poecilia_formosa
ENSONIG00000017406	prpf6	100	97.420	ENSPLAG00000005974	prpf6	100	97.420	Poecilia_latipinna
ENSONIG00000017406	prpf6	100	97.626	ENSPMEG00000009977	prpf6	100	97.626	Poecilia_mexicana
ENSONIG00000017406	prpf6	100	97.523	ENSPREG00000017993	prpf6	95	97.523	Poecilia_reticulata
ENSONIG00000017406	prpf6	96	91.817	ENSPPYG00000011256	PRPF6	100	91.392	Pongo_abelii
ENSONIG00000017406	prpf6	91	94.935	ENSPCAG00000006536	PRPF6	88	94.281	Procavia_capensis
ENSONIG00000017406	prpf6	96	92.349	ENSPCOG00000016881	PRPF6	100	91.923	Propithecus_coquereli
ENSONIG00000017406	prpf6	96	86.610	ENSPVAG00000014316	PRPF6	100	86.185	Pteropus_vampyrus
ENSONIG00000017406	prpf6	100	85.524	ENSPNYG00000001939	prpf6	100	85.524	Pundamilia_nyererei
ENSONIG00000017406	prpf6	100	93.340	ENSPNAG00000015606	prpf6	100	93.340	Pygocentrus_nattereri
ENSONIG00000017406	prpf6	96	93.092	ENSRNOG00000051498	Prpf6	100	92.667	Rattus_norvegicus
ENSONIG00000017406	prpf6	96	92.242	ENSRBIG00000043613	PRPF6	100	91.817	Rhinopithecus_bieti
ENSONIG00000017406	prpf6	96	89.312	ENSRROG00000040969	PRPF6	98	92.042	Rhinopithecus_roxellana
ENSONIG00000017406	prpf6	87	89.558	ENSSBOG00000020632	PRPF6	93	87.370	Saimiri_boliviensis_boliviensis
ENSONIG00000017406	prpf6	96	93.199	ENSSHAG00000016810	PRPF6	100	92.774	Sarcophilus_harrisii
ENSONIG00000017406	prpf6	95	95.376	ENSSFOG00015020859	prpf6	100	95.376	Scleropages_formosus
ENSONIG00000017406	prpf6	100	96.285	ENSSMAG00000008112	prpf6	100	96.285	Scophthalmus_maximus
ENSONIG00000017406	prpf6	100	98.246	ENSSDUG00000016142	prpf6	100	98.246	Seriola_dumerili
ENSONIG00000017406	prpf6	100	98.246	ENSSLDG00000025283	prpf6	99	98.246	Seriola_lalandi_dorsalis
ENSONIG00000017406	prpf6	90	91.714	ENSSPUG00000018260	PRPF6	100	91.260	Sphenodon_punctatus
ENSONIG00000017406	prpf6	100	98.246	ENSSPAG00000015850	prpf6	100	98.246	Stegastes_partitus
ENSONIG00000017406	prpf6	97	91.309	ENSSSCG00000029119	PRPF6	98	92.148	Sus_scrofa
ENSONIG00000017406	prpf6	96	92.903	ENSTGUG00000007221	PRPF6	100	92.585	Taeniopygia_guttata
ENSONIG00000017406	prpf6	100	96.801	ENSTRUG00000002920	prpf6	100	96.801	Takifugu_rubripes
ENSONIG00000017406	prpf6	96	90.648	ENSTNIG00000017873	prpf6	100	90.648	Tetraodon_nigroviridis
ENSONIG00000017406	prpf6	85	95.000	ENSTBEG00000005348	PRPF6	85	92.778	Tupaia_belangeri
ENSONIG00000017406	prpf6	96	92.455	ENSTTRG00000013068	PRPF6	100	92.030	Tursiops_truncatus
ENSONIG00000017406	prpf6	98	87.461	ENSUMAG00000021631	PRPF6	98	90.761	Ursus_maritimus
ENSONIG00000017406	prpf6	96	92.774	ENSVVUG00000014948	PRPF6	100	92.349	Vulpes_vulpes
ENSONIG00000017406	prpf6	96	92.340	ENSXETG00000012054	prpf6	97	91.915	Xenopus_tropicalis
ENSONIG00000017406	prpf6	100	97.730	ENSXCOG00000008082	prpf6	100	97.730	Xiphophorus_couchianus
ENSONIG00000017406	prpf6	100	97.626	ENSXMAG00000015581	prpf6	100	97.626	Xiphophorus_maculatus