EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSONIG00000017469 (Gene tree)
Gene ID: 100706601
Gene Symbol: -
Alias: -
Full Name: stem-loop binding protein
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Minus strand
Length: 5147 bases
Position: chrGL831415.1:678654-683800
Accession: 100706601
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000022030	SLBP_RNA_bind	PF15247.6	1.6e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000022049	-	2198	-	ENSONIP00000022030	278 (aa)	XP_003458153	I3KLN5

Gene Model

Click here to download ENSONIG00000017469's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000017469's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000017469	-	90	49.206	ENSG00000163950	SLBP	81	56.872	Homo_sapiens
ENSONIG00000017469	-	100	78.799	ENSAPOG00000004953	slbp	100	78.799	Acanthochromis_polyacanthus
ENSONIG00000017469	-	54	64.901	ENSAMEG00000016915	SLBP	87	57.971	Ailuropoda_melanoleuca
ENSONIG00000017469	-	95	77.068	ENSACIG00000022308	slbp	98	77.068	Amphilophus_citrinellus
ENSONIG00000017469	-	98	79.562	ENSAOCG00000024545	slbp	97	79.562	Amphiprion_ocellaris
ENSONIG00000017469	-	99	78.723	ENSAPEG00000017629	slbp	99	78.723	Amphiprion_percula
ENSONIG00000017469	-	99	78.369	ENSATEG00000016358	slbp	99	78.369	Anabas_testudineus
ENSONIG00000017469	-	73	56.863	ENSAPLG00000015989	-	87	57.561	Anas_platyrhynchos
ENSONIG00000017469	-	89	47.860	ENSANAG00000034769	SLBP	81	56.872	Aotus_nancymaae
ENSONIG00000017469	-	100	95.324	ENSACLG00000007036	-	100	95.324	Astatotilapia_calliptera
ENSONIG00000017469	-	100	55.319	ENSAMXG00000014527	slbp	100	55.674	Astyanax_mexicanus
ENSONIG00000017469	-	75	53.810	ENSBTAG00000001328	SLBP	82	52.964	Bos_taurus
ENSONIG00000017469	-	89	49.012	ENSCJAG00000001790	SLBP	82	50.575	Callithrix_jacchus
ENSONIG00000017469	-	77	52.804	ENSCAFG00000015016	SLBP	82	52.569	Canis_familiaris
ENSONIG00000017469	-	77	52.804	ENSCAFG00020012334	SLBP	82	52.569	Canis_lupus_dingo
ENSONIG00000017469	-	70	56.633	ENSCHIG00000019364	SLBP	82	52.964	Capra_hircus
ENSONIG00000017469	-	78	52.703	ENSTSYG00000000376	SLBP	87	54.867	Carlito_syrichta
ENSONIG00000017469	-	56	62.179	ENSCPOG00000000031	SLBP	81	51.984	Cavia_porcellus
ENSONIG00000017469	-	90	49.206	ENSCATG00000029173	SLBP	81	56.872	Cercocebus_atys
ENSONIG00000017469	-	56	66.242	ENSCLAG00000008157	SLBP	83	52.569	Chinchilla_lanigera
ENSONIG00000017469	-	64	43.575	ENSCSAG00000015628	SLBP	60	46.448	Chlorocebus_sabaeus
ENSONIG00000017469	-	89	54.217	ENSCPBG00000000746	SLBP	82	54.435	Chrysemys_picta_bellii
ENSONIG00000017469	-	72	54.412	ENSCANG00000041008	SLBP	87	56.250	Colobus_angolensis_palliatus
ENSONIG00000017469	-	78	52.074	ENSCGRG00001009760	-	82	52.362	Cricetulus_griseus_chok1gshd
ENSONIG00000017469	-	78	51.152	ENSCGRG00001012991	-	87	51.383	Cricetulus_griseus_chok1gshd
ENSONIG00000017469	-	78	52.074	ENSCGRG00000004506	Slbp	82	52.362	Cricetulus_griseus_crigri
ENSONIG00000017469	-	97	73.260	ENSCSEG00000020337	-	97	73.260	Cynoglossus_semilaevis
ENSONIG00000017469	-	94	67.681	ENSCVAG00000019592	-	94	67.681	Cyprinodon_variegatus
ENSONIG00000017469	-	100	53.633	ENSDARG00000100558	slbp	90	54.325	Danio_rerio
ENSONIG00000017469	-	75	54.976	ENSDNOG00000047539	SLBP	85	53.150	Dasypus_novemcinctus
ENSONIG00000017469	-	54	63.333	ENSDORG00000003028	Slbp	91	66.883	Dipodomys_ordii
ENSONIG00000017469	-	71	57.286	ENSETEG00000004641	SLBP	92	54.661	Echinops_telfairi
ENSONIG00000017469	-	63	52.841	ENSEASG00005022714	SLBP	85	56.425	Equus_asinus_asinus
ENSONIG00000017469	-	70	57.653	ENSECAG00000011689	SLBP	60	60.000	Equus_caballus
ENSONIG00000017469	-	89	60.000	ENSELUG00000012854	slbp	88	62.400	Esox_lucius
ENSONIG00000017469	-	59	61.818	ENSFCAG00000000169	SLBP	81	57.416	Felis_catus
ENSONIG00000017469	-	94	49.813	ENSFALG00000010003	-	89	49.813	Ficedula_albicollis
ENSONIG00000017469	-	59	61.585	ENSFDAG00000007592	SLBP	89	52.344	Fukomys_damarensis
ENSONIG00000017469	-	93	71.374	ENSFHEG00000007497	slbp	94	69.847	Fundulus_heteroclitus
ENSONIG00000017469	-	55	75.000	ENSGMOG00000015352	slbp	99	74.214	Gadus_morhua
ENSONIG00000017469	-	95	50.943	ENSGALG00000015712	SLBP	89	50.943	Gallus_gallus
ENSONIG00000017469	-	94	72.519	ENSGAFG00000019577	slbp	93	72.519	Gambusia_affinis
ENSONIG00000017469	-	93	69.202	ENSGACG00000019596	slbp	95	69.202	Gasterosteus_aculeatus
ENSONIG00000017469	-	81	56.087	ENSGAGG00000012096	SLBP	87	56.087	Gopherus_agassizii
ENSONIG00000017469	-	90	49.206	ENSGGOG00000003167	SLBP	81	56.872	Gorilla_gorilla
ENSONIG00000017469	-	100	95.683	ENSHBUG00000003338	-	100	95.683	Haplochromis_burtoni
ENSONIG00000017469	-	56	58.974	ENSHGLG00000008313	-	84	44.488	Heterocephalus_glaber_female
ENSONIG00000017469	-	59	57.738	ENSHGLG00000010461	-	84	49.378	Heterocephalus_glaber_female
ENSONIG00000017469	-	59	57.738	ENSHGLG00100014906	-	84	49.378	Heterocephalus_glaber_male
ENSONIG00000017469	-	56	60.256	ENSHGLG00100010510	-	84	45.276	Heterocephalus_glaber_male
ENSONIG00000017469	-	59	60.366	ENSHGLG00100014018	-	91	58.209	Heterocephalus_glaber_male
ENSONIG00000017469	-	98	70.438	ENSHCOG00000013425	slbp	97	70.438	Hippocampus_comes
ENSONIG00000017469	-	78	59.009	ENSIPUG00000016780	slbp	97	51.493	Ictalurus_punctatus
ENSONIG00000017469	-	57	63.354	ENSSTOG00000003262	SLBP	82	52.549	Ictidomys_tridecemlineatus
ENSONIG00000017469	-	78	52.535	ENSJJAG00000002394	-	82	51.575	Jaculus_jaculus
ENSONIG00000017469	-	78	52.535	ENSJJAG00000020549	-	82	52.362	Jaculus_jaculus
ENSONIG00000017469	-	99	72.242	ENSKMAG00000008187	slbp	98	72.242	Kryptolebias_marmoratus
ENSONIG00000017469	-	99	74.823	ENSLBEG00000024709	slbp	100	74.823	Labrus_bergylta
ENSONIG00000017469	-	90	51.373	ENSLACG00000014623	SLBP	86	51.373	Latimeria_chalumnae
ENSONIG00000017469	-	97	58.065	ENSLOCG00000011027	slbp	91	58.065	Lepisosteus_oculatus
ENSONIG00000017469	-	77	52.968	ENSLAFG00000012933	SLBP	83	55.963	Loxodonta_africana
ENSONIG00000017469	-	89	49.200	ENSMFAG00000030130	SLBP	74	52.356	Macaca_fascicularis
ENSONIG00000017469	-	90	47.876	ENSMMUG00000032303	SLBP	84	56.398	Macaca_mulatta
ENSONIG00000017469	-	54	44.654	ENSMNEG00000008082	SLBP	64	47.853	Macaca_nemestrina
ENSONIG00000017469	-	80	51.327	ENSMLEG00000024639	SLBP	84	53.478	Mandrillus_leucophaeus
ENSONIG00000017469	-	99	73.214	ENSMAMG00000001046	-	99	73.214	Mastacembelus_armatus
ENSONIG00000017469	-	100	95.683	ENSMZEG00005017261	-	100	95.683	Maylandia_zebra
ENSONIG00000017469	-	73	57.426	ENSMGAG00000013085	SLBP	87	57.711	Meleagris_gallopavo
ENSONIG00000017469	-	78	54.338	ENSMAUG00000009490	Slbp	82	51.969	Mesocricetus_auratus
ENSONIG00000017469	-	60	60.714	ENSMICG00000014244	SLBP	65	67.308	Microcebus_murinus
ENSONIG00000017469	-	78	52.074	ENSMOCG00000015826	Slbp	86	58.000	Microtus_ochrogaster
ENSONIG00000017469	-	91	65.748	ENSMMOG00000010181	slbp	92	65.748	Mola_mola
ENSONIG00000017469	-	78	52.968	ENSMODG00000004304	SLBP	89	51.953	Monodelphis_domestica
ENSONIG00000017469	-	100	74.558	ENSMALG00000013883	-	74	74.558	Monopterus_albus
ENSONIG00000017469	-	78	51.613	MGP_CAROLIEiJ_G0027117	Slbp	90	54.884	Mus_caroli
ENSONIG00000017469	-	78	51.613	ENSMUSG00000004642	Slbp	84	57.000	Mus_musculus
ENSONIG00000017469	-	78	51.613	MGP_PahariEiJ_G0016901	Slbp	83	57.000	Mus_pahari
ENSONIG00000017469	-	78	51.613	MGP_SPRETEiJ_G0028113	Slbp	84	57.000	Mus_spretus
ENSONIG00000017469	-	59	56.364	ENSMPUG00000011139	SLBP	79	59.172	Mustela_putorius_furo
ENSONIG00000017469	-	54	65.132	ENSMLUG00000004425	SLBP	82	52.709	Myotis_lucifugus
ENSONIG00000017469	-	78	55.505	ENSNGAG00000020799	Slbp	82	52.569	Nannospalax_galili
ENSONIG00000017469	-	88	92.339	ENSNBRG00000006044	-	94	92.339	Neolamprologus_brichardi
ENSONIG00000017469	-	90	47.876	ENSNLEG00000000048	SLBP	81	56.872	Nomascus_leucogenys
ENSONIG00000017469	-	53	65.986	ENSMEUG00000002501	SLBP	97	59.893	Notamacropus_eugenii
ENSONIG00000017469	-	56	68.153	ENSODEG00000012641	SLBP	84	53.968	Octodon_degus
ENSONIG00000017469	-	73	58.911	ENSOANG00000014243	SLBP	82	58.911	Ornithorhynchus_anatinus
ENSONIG00000017469	-	97	64.727	ENSORLG00000024887	-	96	64.727	Oryzias_latipes
ENSONIG00000017469	-	97	63.139	ENSORLG00020007798	slbp	96	63.139	Oryzias_latipes_hni
ENSONIG00000017469	-	97	63.869	ENSORLG00015016656	slbp	96	62.774	Oryzias_latipes_hsok
ENSONIG00000017469	-	90	66.798	ENSOMEG00000010818	slbp	96	64.493	Oryzias_melastigma
ENSONIG00000017469	-	75	56.604	ENSOGAG00000009750	SLBP	81	51.765	Otolemur_garnettii
ENSONIG00000017469	-	54	64.901	ENSOARG00000016090	SLBP	87	58.454	Ovis_aries
ENSONIG00000017469	-	90	49.206	ENSPPAG00000033300	SLBP	81	56.872	Pan_paniscus
ENSONIG00000017469	-	58	61.963	ENSPPRG00000016897	SLBP	89	51.984	Panthera_pardus
ENSONIG00000017469	-	89	49.200	ENSPTRG00000015832	SLBP	81	56.872	Pan_troglodytes
ENSONIG00000017469	-	77	50.667	ENSPANG00000004932	SLBP	81	56.872	Papio_anubis
ENSONIG00000017469	-	89	59.761	ENSPKIG00000006183	slbp	92	56.985	Paramormyrops_kingsleyae
ENSONIG00000017469	-	88	63.008	ENSPMGG00000017684	-	99	64.623	Periophthalmus_magnuspinnatus
ENSONIG00000017469	-	78	52.074	ENSPEMG00000018369	Slbp	82	52.569	Peromyscus_maniculatus_bairdii
ENSONIG00000017469	-	71	56.098	ENSPCIG00000013575	SLBP	70	51.894	Phascolarctos_cinereus
ENSONIG00000017469	-	94	72.901	ENSPFOG00000000462	slbp	93	72.901	Poecilia_formosa
ENSONIG00000017469	-	94	72.519	ENSPLAG00000008300	slbp	93	72.519	Poecilia_latipinna
ENSONIG00000017469	-	94	72.901	ENSPMEG00000020807	slbp	93	72.901	Poecilia_mexicana
ENSONIG00000017469	-	94	73.282	ENSPREG00000004561	slbp	93	73.282	Poecilia_reticulata
ENSONIG00000017469	-	90	51.383	ENSPPYG00000014529	SLBP	82	50.781	Pongo_abelii
ENSONIG00000017469	-	75	53.110	ENSPCOG00000017399	SLBP	81	55.981	Propithecus_coquereli
ENSONIG00000017469	-	89	46.988	ENSPVAG00000002807	SLBP	73	57.005	Pteropus_vampyrus
ENSONIG00000017469	-	100	95.683	ENSPNYG00000005451	-	100	95.683	Pundamilia_nyererei
ENSONIG00000017469	-	99	56.890	ENSPNAG00000018503	slbp	98	56.383	Pygocentrus_nattereri
ENSONIG00000017469	-	78	51.152	ENSRNOG00000037162	Slbp	82	51.779	Rattus_norvegicus
ENSONIG00000017469	-	90	49.206	ENSRBIG00000039159	SLBP	81	56.872	Rhinopithecus_bieti
ENSONIG00000017469	-	89	49.402	ENSRROG00000030081	SLBP	84	51.172	Rhinopithecus_roxellana
ENSONIG00000017469	-	63	55.618	ENSSBOG00000033897	SLBP	85	54.696	Saimiri_boliviensis_boliviensis
ENSONIG00000017469	-	71	57.426	ENSSHAG00000013939	SLBP	82	52.874	Sarcophilus_harrisii
ENSONIG00000017469	-	91	59.533	ENSSFOG00015019429	slbp	89	59.533	Scleropages_formosus
ENSONIG00000017469	-	99	72.598	ENSSMAG00000016028	-	99	72.598	Scophthalmus_maximus
ENSONIG00000017469	-	99	79.422	ENSSDUG00000000855	-	99	79.422	Seriola_dumerili
ENSONIG00000017469	-	93	59.231	ENSSLDG00000007554	-	83	58.846	Seriola_lalandi_dorsalis
ENSONIG00000017469	-	58	80.745	ENSSLDG00000022893	-	93	80.745	Seriola_lalandi_dorsalis
ENSONIG00000017469	-	90	48.016	ENSSPUG00000016007	SLBP	87	51.562	Sphenodon_punctatus
ENSONIG00000017469	-	99	78.058	ENSSPAG00000004021	slbp	100	78.462	Stegastes_partitus
ENSONIG00000017469	-	91	50.000	ENSSSCG00000008676	SLBP	82	52.569	Sus_scrofa
ENSONIG00000017469	-	89	51.613	ENSTGUG00000010626	-	88	52.016	Taeniopygia_guttata
ENSONIG00000017469	-	93	73.384	ENSTRUG00000000688	slbp	92	73.384	Takifugu_rubripes
ENSONIG00000017469	-	90	68.000	ENSTNIG00000000484	-	95	68.000	Tetraodon_nigroviridis
ENSONIG00000017469	-	54	64.667	ENSTTRG00000010901	-	88	57.353	Tursiops_truncatus
ENSONIG00000017469	-	54	62.914	ENSTTRG00000004010	-	91	57.310	Tursiops_truncatus
ENSONIG00000017469	-	70	56.633	ENSUAMG00000012990	SLBP	81	52.174	Ursus_americanus
ENSONIG00000017469	-	77	53.271	ENSVVUG00000015578	-	82	52.964	Vulpes_vulpes
ENSONIG00000017469	-	91	50.000	ENSXETG00000003876	slbp	95	50.000	Xenopus_tropicalis
ENSONIG00000017469	-	87	73.554	ENSXCOG00000008275	slbp	90	73.554	Xiphophorus_couchianus
ENSONIG00000017469	-	94	71.756	ENSXMAG00000001331	-	92	71.756	Xiphophorus_maculatus