EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSONIG00000017683 (Gene tree)
Gene ID: 100705627
Gene Symbol: exosc1
Alias: -
Full Name: exosome component 1
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Plus strand
Length: 4690 bases
Position: chrGL831321.1:803662-808351
Accession: ZDB-GENE-080926-3
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000022296	EXOSC1	PF10447.9	1.4e-15	1	1
ENSONIP00000022296	ECR1_N	PF14382.6	4.4e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000022315	-	588	-	ENSONIP00000022296	195 (aa)	-	I3KMF1

Gene Model

Click here to download ENSONIG00000017683's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000017683's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000017683	exosc1	98	80.105	ENSG00000171311	EXOSC1	98	80.105	Homo_sapiens
ENSONIG00000017683	exosc1	99	97.938	ENSAPOG00000007822	exosc1	100	97.938	Acanthochromis_polyacanthus
ENSONIG00000017683	exosc1	98	80.628	ENSAMEG00000000129	EXOSC1	98	80.628	Ailuropoda_melanoleuca
ENSONIG00000017683	exosc1	95	98.378	ENSACIG00000018956	exosc1	91	98.378	Amphilophus_citrinellus
ENSONIG00000017683	exosc1	99	98.454	ENSAOCG00000010699	exosc1	100	98.454	Amphiprion_ocellaris
ENSONIG00000017683	exosc1	92	86.667	ENSAPEG00000012690	exosc1	97	86.667	Amphiprion_percula
ENSONIG00000017683	exosc1	99	97.938	ENSATEG00000018683	exosc1	100	97.938	Anabas_testudineus
ENSONIG00000017683	exosc1	99	75.258	ENSACAG00000002101	EXOSC1	99	75.258	Anolis_carolinensis
ENSONIG00000017683	exosc1	98	80.105	ENSANAG00000034669	EXOSC1	98	80.105	Aotus_nancymaae
ENSONIG00000017683	exosc1	99	98.969	ENSACLG00000021243	exosc1	100	98.969	Astatotilapia_calliptera
ENSONIG00000017683	exosc1	99	94.330	ENSAMXG00000011116	exosc1	100	94.330	Astyanax_mexicanus
ENSONIG00000017683	exosc1	98	80.628	ENSBTAG00000012699	EXOSC1	98	80.628	Bos_taurus
ENSONIG00000017683	exosc1	93	35.079	WBGene00012966	exos-1	92	35.079	Caenorhabditis_elegans
ENSONIG00000017683	exosc1	98	79.581	ENSCJAG00000016586	EXOSC1	98	79.581	Callithrix_jacchus
ENSONIG00000017683	exosc1	98	80.105	ENSCAFG00000009068	EXOSC1	92	80.105	Canis_familiaris
ENSONIG00000017683	exosc1	98	80.105	ENSCAFG00020006002	EXOSC1	92	80.105	Canis_lupus_dingo
ENSONIG00000017683	exosc1	98	80.628	ENSCHIG00000015253	EXOSC1	98	80.628	Capra_hircus
ENSONIG00000017683	exosc1	98	79.058	ENSTSYG00000000760	EXOSC1	98	79.058	Carlito_syrichta
ENSONIG00000017683	exosc1	98	80.105	ENSCPOG00000001173	EXOSC1	98	80.105	Cavia_porcellus
ENSONIG00000017683	exosc1	98	42.487	ENSCCAG00000023986	EXOSC1	98	42.487	Cebus_capucinus
ENSONIG00000017683	exosc1	98	80.105	ENSCATG00000034114	EXOSC1	98	80.105	Cercocebus_atys
ENSONIG00000017683	exosc1	98	80.105	ENSCLAG00000002463	EXOSC1	98	80.105	Chinchilla_lanigera
ENSONIG00000017683	exosc1	98	79.581	ENSCSAG00000005870	EXOSC1	98	79.581	Chlorocebus_sabaeus
ENSONIG00000017683	exosc1	94	67.391	ENSCHOG00000006477	EXOSC1	98	67.391	Choloepus_hoffmanni
ENSONIG00000017683	exosc1	54	67.925	ENSCPBG00000011949	EXOSC1	88	67.925	Chrysemys_picta_bellii
ENSONIG00000017683	exosc1	98	51.295	ENSCING00000022734	-	92	51.295	Ciona_intestinalis
ENSONIG00000017683	exosc1	98	54.922	ENSCSAVG00000010865	-	98	54.922	Ciona_savignyi
ENSONIG00000017683	exosc1	98	80.105	ENSCANG00000034159	EXOSC1	98	80.105	Colobus_angolensis_palliatus
ENSONIG00000017683	exosc1	98	79.058	ENSCGRG00001000335	Exosc1	98	79.058	Cricetulus_griseus_chok1gshd
ENSONIG00000017683	exosc1	98	79.058	ENSCGRG00000011602	Exosc1	98	79.058	Cricetulus_griseus_crigri
ENSONIG00000017683	exosc1	100	82.564	ENSCSEG00000007895	exosc1	97	82.564	Cynoglossus_semilaevis
ENSONIG00000017683	exosc1	99	87.629	ENSCVAG00000016748	exosc1	100	87.629	Cyprinodon_variegatus
ENSONIG00000017683	exosc1	99	94.845	ENSDARG00000059841	exosc1	100	94.845	Danio_rerio
ENSONIG00000017683	exosc1	74	76.552	ENSDNOG00000007983	EXOSC1	98	76.552	Dasypus_novemcinctus
ENSONIG00000017683	exosc1	98	79.581	ENSDORG00000016528	Exosc1	98	79.581	Dipodomys_ordii
ENSONIG00000017683	exosc1	95	47.895	FBgn0032346	Csl4	92	47.895	Drosophila_melanogaster
ENSONIG00000017683	exosc1	98	78.534	ENSETEG00000002469	-	98	78.534	Echinops_telfairi
ENSONIG00000017683	exosc1	97	65.625	ENSEBUG00000008164	exosc1	96	65.625	Eptatretus_burgeri
ENSONIG00000017683	exosc1	98	71.204	ENSEASG00005008684	EXOSC1	98	71.204	Equus_asinus_asinus
ENSONIG00000017683	exosc1	59	56.034	ENSECAG00000010621	EXOSC1	69	56.034	Equus_caballus
ENSONIG00000017683	exosc1	98	79.058	ENSEEUG00000005647	EXOSC1	98	79.058	Erinaceus_europaeus
ENSONIG00000017683	exosc1	98	90.863	ENSELUG00000017369	exosc1	87	90.863	Esox_lucius
ENSONIG00000017683	exosc1	98	80.628	ENSFCAG00000040563	EXOSC1	92	80.628	Felis_catus
ENSONIG00000017683	exosc1	98	78.010	ENSFALG00000008450	EXOSC1	98	78.010	Ficedula_albicollis
ENSONIG00000017683	exosc1	98	80.628	ENSFDAG00000000846	EXOSC1	98	80.628	Fukomys_damarensis
ENSONIG00000017683	exosc1	99	88.144	ENSFHEG00000009154	exosc1	100	88.144	Fundulus_heteroclitus
ENSONIG00000017683	exosc1	99	95.361	ENSGMOG00000008993	exosc1	100	95.361	Gadus_morhua
ENSONIG00000017683	exosc1	98	65.969	ENSGALG00000039917	EXOSC1	99	84.138	Gallus_gallus
ENSONIG00000017683	exosc1	100	88.718	ENSGAFG00000010265	exosc1	96	88.718	Gambusia_affinis
ENSONIG00000017683	exosc1	99	94.330	ENSGACG00000018936	exosc1	100	94.330	Gasterosteus_aculeatus
ENSONIG00000017683	exosc1	98	77.487	ENSGAGG00000019192	EXOSC1	98	77.487	Gopherus_agassizii
ENSONIG00000017683	exosc1	98	69.110	ENSGGOG00000003099	EXOSC1	98	69.110	Gorilla_gorilla
ENSONIG00000017683	exosc1	99	98.969	ENSHBUG00000017857	exosc1	100	98.969	Haplochromis_burtoni
ENSONIG00000017683	exosc1	98	80.105	ENSHGLG00000016927	EXOSC1	98	80.105	Heterocephalus_glaber_female
ENSONIG00000017683	exosc1	98	80.105	ENSHGLG00100012208	EXOSC1	98	80.105	Heterocephalus_glaber_male
ENSONIG00000017683	exosc1	99	95.876	ENSHCOG00000019882	exosc1	100	95.876	Hippocampus_comes
ENSONIG00000017683	exosc1	99	91.753	ENSIPUG00000007685	exosc1	100	91.753	Ictalurus_punctatus
ENSONIG00000017683	exosc1	98	79.581	ENSSTOG00000006615	EXOSC1	98	79.581	Ictidomys_tridecemlineatus
ENSONIG00000017683	exosc1	61	63.866	ENSSTOG00000029860	-	91	63.866	Ictidomys_tridecemlineatus
ENSONIG00000017683	exosc1	98	80.105	ENSJJAG00000013311	Exosc1	98	80.105	Jaculus_jaculus
ENSONIG00000017683	exosc1	100	93.333	ENSKMAG00000001202	exosc1	82	93.333	Kryptolebias_marmoratus
ENSONIG00000017683	exosc1	99	97.423	ENSLBEG00000011448	exosc1	100	97.423	Labrus_bergylta
ENSONIG00000017683	exosc1	99	65.500	ENSLOCG00000003776	exosc1	100	65.500	Lepisosteus_oculatus
ENSONIG00000017683	exosc1	98	80.105	ENSLAFG00000015983	EXOSC1	98	80.105	Loxodonta_africana
ENSONIG00000017683	exosc1	98	80.105	ENSMFAG00000001493	EXOSC1	98	80.105	Macaca_fascicularis
ENSONIG00000017683	exosc1	98	80.105	ENSMMUG00000020028	EXOSC1	98	73.333	Macaca_mulatta
ENSONIG00000017683	exosc1	98	80.105	ENSMNEG00000029816	EXOSC1	98	80.105	Macaca_nemestrina
ENSONIG00000017683	exosc1	98	74.346	ENSMLEG00000027643	EXOSC1	98	74.346	Mandrillus_leucophaeus
ENSONIG00000017683	exosc1	99	97.423	ENSMAMG00000012200	exosc1	100	97.423	Mastacembelus_armatus
ENSONIG00000017683	exosc1	99	98.969	ENSMZEG00005007042	exosc1	100	98.969	Maylandia_zebra
ENSONIG00000017683	exosc1	98	69.110	ENSMAUG00000020462	-	98	69.110	Mesocricetus_auratus
ENSONIG00000017683	exosc1	98	80.105	ENSMICG00000007664	EXOSC1	91	80.105	Microcebus_murinus
ENSONIG00000017683	exosc1	96	74.603	ENSMOCG00000017124	-	96	74.603	Microtus_ochrogaster
ENSONIG00000017683	exosc1	98	79.058	ENSMOCG00000006004	-	98	79.058	Microtus_ochrogaster
ENSONIG00000017683	exosc1	99	72.165	ENSMMOG00000021403	exosc1	100	72.165	Mola_mola
ENSONIG00000017683	exosc1	98	80.208	ENSMODG00000004213	EXOSC1	98	80.208	Monodelphis_domestica
ENSONIG00000017683	exosc1	95	97.297	ENSMALG00000007061	exosc1	93	97.297	Monopterus_albus
ENSONIG00000017683	exosc1	98	78.534	MGP_CAROLIEiJ_G0022959	Exosc1	98	78.534	Mus_caroli
ENSONIG00000017683	exosc1	98	78.534	ENSMUSG00000034321	Exosc1	98	78.534	Mus_musculus
ENSONIG00000017683	exosc1	98	79.058	MGP_PahariEiJ_G0014449	Exosc1	98	79.058	Mus_pahari
ENSONIG00000017683	exosc1	98	78.534	MGP_SPRETEiJ_G0023880	Exosc1	98	78.534	Mus_spretus
ENSONIG00000017683	exosc1	98	80.628	ENSMPUG00000017044	EXOSC1	98	80.628	Mustela_putorius_furo
ENSONIG00000017683	exosc1	98	80.105	ENSMLUG00000009228	EXOSC1	98	80.105	Myotis_lucifugus
ENSONIG00000017683	exosc1	98	77.487	ENSNGAG00000022033	Exosc1	98	77.487	Nannospalax_galili
ENSONIG00000017683	exosc1	100	77.949	ENSNBRG00000024007	exosc1	100	77.949	Neolamprologus_brichardi
ENSONIG00000017683	exosc1	98	79.581	ENSNLEG00000013872	EXOSC1	98	79.581	Nomascus_leucogenys
ENSONIG00000017683	exosc1	57	72.321	ENSMEUG00000002246	EXOSC1	97	72.321	Notamacropus_eugenii
ENSONIG00000017683	exosc1	98	79.058	ENSOPRG00000005065	EXOSC1	98	79.058	Ochotona_princeps
ENSONIG00000017683	exosc1	98	80.628	ENSODEG00000016709	EXOSC1	98	80.628	Octodon_degus
ENSONIG00000017683	exosc1	58	91.228	ENSOANG00000006563	EXOSC1	98	87.805	Ornithorhynchus_anatinus
ENSONIG00000017683	exosc1	98	74.346	ENSOCUG00000026461	-	98	74.346	Oryctolagus_cuniculus
ENSONIG00000017683	exosc1	98	78.646	ENSOCUG00000011898	-	98	78.646	Oryctolagus_cuniculus
ENSONIG00000017683	exosc1	99	90.769	ENSORLG00000011595	exosc1	100	90.769	Oryzias_latipes
ENSONIG00000017683	exosc1	99	90.769	ENSORLG00020005831	exosc1	100	90.769	Oryzias_latipes_hni
ENSONIG00000017683	exosc1	99	90.256	ENSORLG00015004317	exosc1	100	90.256	Oryzias_latipes_hsok
ENSONIG00000017683	exosc1	100	77.436	ENSOMEG00000013907	exosc1	100	77.436	Oryzias_melastigma
ENSONIG00000017683	exosc1	98	79.581	ENSOGAG00000016259	EXOSC1	98	79.581	Otolemur_garnettii
ENSONIG00000017683	exosc1	98	80.105	ENSOARG00000010136	EXOSC1	98	80.105	Ovis_aries
ENSONIG00000017683	exosc1	98	74.093	ENSPPAG00000039842	EXOSC1	98	74.093	Pan_paniscus
ENSONIG00000017683	exosc1	98	80.628	ENSPPRG00000023366	EXOSC1	98	80.628	Panthera_pardus
ENSONIG00000017683	exosc1	98	80.628	ENSPTIG00000017701	EXOSC1	98	80.628	Panthera_tigris_altaica
ENSONIG00000017683	exosc1	98	80.105	ENSPTRG00000002808	EXOSC1	98	80.105	Pan_troglodytes
ENSONIG00000017683	exosc1	98	80.105	ENSPANG00000021324	EXOSC1	98	80.105	Papio_anubis
ENSONIG00000017683	exosc1	99	91.753	ENSPKIG00000016037	exosc1	100	91.753	Paramormyrops_kingsleyae
ENSONIG00000017683	exosc1	91	66.842	ENSPSIG00000013571	EXOSC1	98	80.992	Pelodiscus_sinensis
ENSONIG00000017683	exosc1	99	84.021	ENSPMGG00000014002	exosc1	100	84.021	Periophthalmus_magnuspinnatus
ENSONIG00000017683	exosc1	98	79.058	ENSPEMG00000010710	-	98	79.058	Peromyscus_maniculatus_bairdii
ENSONIG00000017683	exosc1	95	70.430	ENSPMAG00000000195	exosc1	95	70.430	Petromyzon_marinus
ENSONIG00000017683	exosc1	98	79.581	ENSPCIG00000002210	EXOSC1	97	79.581	Phascolarctos_cinereus
ENSONIG00000017683	exosc1	100	87.692	ENSPFOG00000006755	exosc1	96	87.692	Poecilia_formosa
ENSONIG00000017683	exosc1	99	87.629	ENSPLAG00000005880	exosc1	100	87.629	Poecilia_latipinna
ENSONIG00000017683	exosc1	100	87.692	ENSPMEG00000015598	exosc1	96	87.692	Poecilia_mexicana
ENSONIG00000017683	exosc1	100	75.897	ENSPREG00000000405	exosc1	95	75.897	Poecilia_reticulata
ENSONIG00000017683	exosc1	98	80.105	ENSPPYG00000002531	EXOSC1	98	80.105	Pongo_abelii
ENSONIG00000017683	exosc1	98	79.058	ENSPCAG00000009135	EXOSC1	98	79.058	Procavia_capensis
ENSONIG00000017683	exosc1	98	73.822	ENSPCOG00000027539	EXOSC1	98	73.822	Propithecus_coquereli
ENSONIG00000017683	exosc1	98	80.105	ENSPVAG00000003372	EXOSC1	98	80.105	Pteropus_vampyrus
ENSONIG00000017683	exosc1	99	98.969	ENSPNYG00000021745	exosc1	100	98.969	Pundamilia_nyererei
ENSONIG00000017683	exosc1	99	93.299	ENSPNAG00000001944	exosc1	100	93.299	Pygocentrus_nattereri
ENSONIG00000017683	exosc1	98	79.058	ENSRNOG00000048708	Exosc1	98	79.058	Rattus_norvegicus
ENSONIG00000017683	exosc1	98	80.105	ENSRBIG00000035618	EXOSC1	98	80.105	Rhinopithecus_bieti
ENSONIG00000017683	exosc1	98	80.105	ENSRROG00000032589	EXOSC1	91	80.105	Rhinopithecus_roxellana
ENSONIG00000017683	exosc1	64	37.500	YNL232W	CSL4	54	37.500	Saccharomyces_cerevisiae
ENSONIG00000017683	exosc1	98	80.105	ENSSBOG00000000359	EXOSC1	98	80.105	Saimiri_boliviensis_boliviensis
ENSONIG00000017683	exosc1	74	89.041	ENSSHAG00000018219	EXOSC1	99	89.041	Sarcophilus_harrisii
ENSONIG00000017683	exosc1	99	90.722	ENSSFOG00015009069	exosc1	100	90.722	Scleropages_formosus
ENSONIG00000017683	exosc1	99	89.691	ENSSFOG00015016289	-	100	89.691	Scleropages_formosus
ENSONIG00000017683	exosc1	99	97.938	ENSSMAG00000003721	exosc1	100	97.938	Scophthalmus_maximus
ENSONIG00000017683	exosc1	99	97.423	ENSSDUG00000002993	exosc1	100	97.423	Seriola_dumerili
ENSONIG00000017683	exosc1	99	97.423	ENSSLDG00000025181	exosc1	100	97.423	Seriola_lalandi_dorsalis
ENSONIG00000017683	exosc1	98	68.586	ENSSARG00000000162	EXOSC1	98	68.586	Sorex_araneus
ENSONIG00000017683	exosc1	98	74.346	ENSSPUG00000012263	EXOSC1	98	74.346	Sphenodon_punctatus
ENSONIG00000017683	exosc1	100	89.744	ENSSPAG00000016792	exosc1	84	89.744	Stegastes_partitus
ENSONIG00000017683	exosc1	98	79.581	ENSSSCG00000010518	EXOSC1	89	79.581	Sus_scrofa
ENSONIG00000017683	exosc1	98	77.487	ENSTGUG00000009692	EXOSC1	98	77.487	Taeniopygia_guttata
ENSONIG00000017683	exosc1	97	83.158	ENSTRUG00000007706	exosc1	98	83.158	Takifugu_rubripes
ENSONIG00000017683	exosc1	100	82.323	ENSTNIG00000014079	exosc1	99	82.323	Tetraodon_nigroviridis
ENSONIG00000017683	exosc1	98	73.822	ENSTBEG00000006011	EXOSC1	98	73.822	Tupaia_belangeri
ENSONIG00000017683	exosc1	94	81.967	ENSTTRG00000009887	EXOSC1	99	81.967	Tursiops_truncatus
ENSONIG00000017683	exosc1	98	64.398	ENSUAMG00000010266	EXOSC1	98	64.398	Ursus_americanus
ENSONIG00000017683	exosc1	98	64.398	ENSUMAG00000022002	EXOSC1	98	64.398	Ursus_maritimus
ENSONIG00000017683	exosc1	98	80.105	ENSVVUG00000023192	EXOSC1	62	80.105	Vulpes_vulpes
ENSONIG00000017683	exosc1	99	76.684	ENSXETG00000003434	exosc1	99	76.684	Xenopus_tropicalis
ENSONIG00000017683	exosc1	62	89.256	ENSXCOG00000014499	exosc1	93	89.256	Xiphophorus_couchianus
ENSONIG00000017683	exosc1	99	76.289	ENSXMAG00000023382	exosc1	94	76.289	Xiphophorus_maculatus