EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSONIG00000017705 (Gene tree)
Gene ID: 100692573
Gene Symbol: LARP4B
Alias: -
Full Name: La ribonucleoprotein domain family member 4B
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Minus strand
Length: 46376 bases
Position: chrGL831411.1:376212-422587
Accession: 100692573
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000022325	La	PF05383.17	1.3e-13	1	1
ENSONIP00000022324	La	PF05383.17	1.3e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000022345	LARP4B-202	2316	-	ENSONIP00000022325	771 (aa)	-	I3KMI0
ENSONIT00000022344	LARP4B-201	2407	-	ENSONIP00000022324	770 (aa)	XP_005463085	I3KMH9

Gene Model

Click here to download ENSONIG00000017705's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000017705's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSONIG00000017705	LARP4B	81	36.257	ENSONIG00000019124	larp4ab	76	37.907

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000017705	LARP4B	100	59.359	ENSG00000107929	LARP4B	100	58.846	Homo_sapiens
ENSONIG00000017705	LARP4B	100	73.385	ENSAPOG00000020531	LARP4B	95	87.719	Acanthochromis_polyacanthus
ENSONIG00000017705	LARP4B	100	57.345	ENSAMEG00000001810	LARP4B	100	57.216	Ailuropoda_melanoleuca
ENSONIG00000017705	LARP4B	98	73.781	ENSAOCG00000007887	-	100	80.929	Amphiprion_ocellaris
ENSONIG00000017705	LARP4B	92	88.268	ENSAPEG00000002512	LARP4B	96	85.714	Amphiprion_percula
ENSONIG00000017705	LARP4B	100	88.689	ENSATEG00000012614	LARP4B	100	88.689	Anabas_testudineus
ENSONIG00000017705	LARP4B	100	61.617	ENSAPLG00000003813	LARP4B	98	61.460	Anas_platyrhynchos
ENSONIG00000017705	LARP4B	100	60.232	ENSACAG00000002858	LARP4B	100	60.178	Anolis_carolinensis
ENSONIG00000017705	LARP4B	100	58.974	ENSANAG00000007531	-	100	58.333	Aotus_nancymaae
ENSONIG00000017705	LARP4B	100	98.312	ENSACLG00000026356	LARP4B	100	98.312	Astatotilapia_calliptera
ENSONIG00000017705	LARP4B	94	54.987	ENSAMXG00000003335	larp4b	97	53.639	Astyanax_mexicanus
ENSONIG00000017705	LARP4B	100	58.365	ENSBTAG00000013899	LARP4B	100	57.908	Bos_taurus
ENSONIG00000017705	LARP4B	100	58.718	ENSCJAG00000018434	LARP4B	100	58.077	Callithrix_jacchus
ENSONIG00000017705	LARP4B	100	57.990	ENSCAFG00020004209	LARP4B	100	66.042	Canis_lupus_dingo
ENSONIG00000017705	LARP4B	99	58.044	ENSCHIG00000013543	LARP4B	99	57.033	Capra_hircus
ENSONIG00000017705	LARP4B	83	61.335	ENSTSYG00000002568	LARP4B	100	61.859	Carlito_syrichta
ENSONIG00000017705	LARP4B	91	53.456	ENSCAPG00000009725	LARP4B	85	57.011	Cavia_aperea
ENSONIG00000017705	LARP4B	100	59.307	ENSCPOG00000009375	LARP4B	100	58.696	Cavia_porcellus
ENSONIG00000017705	LARP4B	100	58.718	ENSCCAG00000024869	LARP4B	100	58.515	Cebus_capucinus
ENSONIG00000017705	LARP4B	100	59.487	ENSCATG00000019750	LARP4B	100	58.974	Cercocebus_atys
ENSONIG00000017705	LARP4B	100	58.899	ENSCLAG00000011570	LARP4B	100	58.344	Chinchilla_lanigera
ENSONIG00000017705	LARP4B	58	78.788	ENSCHOG00000007831	-	59	78.788	Choloepus_hoffmanni
ENSONIG00000017705	LARP4B	100	60.587	ENSCPBG00000017063	LARP4B	100	60.305	Chrysemys_picta_bellii
ENSONIG00000017705	LARP4B	100	57.564	ENSCANG00000038021	LARP4B	100	57.051	Colobus_angolensis_palliatus
ENSONIG00000017705	LARP4B	100	58.333	ENSCGRG00001022930	Larp4b	100	63.328	Cricetulus_griseus_chok1gshd
ENSONIG00000017705	LARP4B	100	58.333	ENSCGRG00000006022	Larp4b	100	63.328	Cricetulus_griseus_crigri
ENSONIG00000017705	LARP4B	100	68.814	ENSCSEG00000007342	LARP4B	100	70.103	Cynoglossus_semilaevis
ENSONIG00000017705	LARP4B	100	83.505	ENSCVAG00000008910	LARP4B	100	83.376	Cyprinodon_variegatus
ENSONIG00000017705	LARP4B	95	54.278	ENSDARG00000062146	larp4b	96	53.763	Danio_rerio
ENSONIG00000017705	LARP4B	96	57.353	ENSDNOG00000045543	-	100	65.302	Dasypus_novemcinctus
ENSONIG00000017705	LARP4B	100	56.722	ENSDORG00000009328	Larp4b	100	56.338	Dipodomys_ordii
ENSONIG00000017705	LARP4B	88	58.571	ENSETEG00000011249	LARP4B	90	58.357	Echinops_telfairi
ENSONIG00000017705	LARP4B	100	58.408	ENSEASG00005019068	-	100	58.151	Equus_asinus_asinus
ENSONIG00000017705	LARP4B	100	58.559	ENSECAG00000024040	LARP4B	100	58.430	Equus_caballus
ENSONIG00000017705	LARP4B	91	59.104	ENSEEUG00000008391	LARP4B	98	56.561	Erinaceus_europaeus
ENSONIG00000017705	LARP4B	88	43.045	ENSELUG00000001417	-	94	42.628	Esox_lucius
ENSONIG00000017705	LARP4B	100	71.322	ENSELUG00000008626	LARP4B	100	70.610	Esox_lucius
ENSONIG00000017705	LARP4B	100	57.915	ENSFCAG00000000721	-	100	57.915	Felis_catus
ENSONIG00000017705	LARP4B	100	61.667	ENSFALG00000006961	LARP4B	100	61.104	Ficedula_albicollis
ENSONIG00000017705	LARP4B	100	58.974	ENSFDAG00000006158	LARP4B	97	58.493	Fukomys_damarensis
ENSONIG00000017705	LARP4B	100	69.588	ENSFHEG00000013037	LARP4B	100	69.290	Fundulus_heteroclitus
ENSONIG00000017705	LARP4B	78	67.978	ENSGMOG00000010818	-	100	62.558	Gadus_morhua
ENSONIG00000017705	LARP4B	100	60.435	ENSGALG00000006672	LARP4B	100	60.051	Gallus_gallus
ENSONIG00000017705	LARP4B	100	76.828	ENSGACG00000017535	LARP4B	98	76.456	Gasterosteus_aculeatus
ENSONIG00000017705	LARP4B	94	59.269	ENSGAGG00000008598	LARP4B	100	60.139	Gopherus_agassizii
ENSONIG00000017705	LARP4B	100	59.359	ENSGGOG00000003572	LARP4B	100	58.846	Gorilla_gorilla
ENSONIG00000017705	LARP4B	100	97.532	ENSHBUG00000007535	LARP4B	100	97.532	Haplochromis_burtoni
ENSONIG00000017705	LARP4B	100	59.387	ENSHGLG00000012936	LARP4B	100	67.832	Heterocephalus_glaber_female
ENSONIG00000017705	LARP4B	100	59.411	ENSHGLG00100016220	-	100	58.981	Heterocephalus_glaber_male
ENSONIG00000017705	LARP4B	87	51.709	ENSHGLG00100017261	-	100	51.791	Heterocephalus_glaber_male
ENSONIG00000017705	LARP4B	80	74.641	ENSHCOG00000011581	LARP4B	80	74.641	Hippocampus_comes
ENSONIG00000017705	LARP4B	94	53.940	ENSIPUG00000009705	larp4b	97	52.767	Ictalurus_punctatus
ENSONIG00000017705	LARP4B	100	57.786	ENSSTOG00000000587	LARP4B	100	68.150	Ictidomys_tridecemlineatus
ENSONIG00000017705	LARP4B	100	59.335	ENSJJAG00000020847	Larp4b	100	58.577	Jaculus_jaculus
ENSONIG00000017705	LARP4B	100	88.372	ENSKMAG00000021674	LARP4B	100	88.372	Kryptolebias_marmoratus
ENSONIG00000017705	LARP4B	80	88.960	ENSLBEG00000025293	-	82	92.269	Labrus_bergylta
ENSONIG00000017705	LARP4B	94	57.902	ENSLACG00000009492	LARP4B	100	59.607	Latimeria_chalumnae
ENSONIG00000017705	LARP4B	100	65.685	ENSLOCG00000012290	larp4b	100	65.434	Lepisosteus_oculatus
ENSONIG00000017705	LARP4B	100	58.354	ENSLAFG00000015334	LARP4B	100	57.629	Loxodonta_africana
ENSONIG00000017705	LARP4B	100	59.487	ENSMFAG00000001766	LARP4B	100	57.051	Macaca_fascicularis
ENSONIG00000017705	LARP4B	100	59.487	ENSMMUG00000005279	LARP4B	100	58.974	Macaca_mulatta
ENSONIG00000017705	LARP4B	100	59.359	ENSMNEG00000014019	LARP4B	100	56.923	Macaca_nemestrina
ENSONIG00000017705	LARP4B	100	59.487	ENSMLEG00000035198	LARP4B	100	58.974	Mandrillus_leucophaeus
ENSONIG00000017705	LARP4B	100	88.062	ENSMAMG00000013742	LARP4B	100	87.420	Mastacembelus_armatus
ENSONIG00000017705	LARP4B	84	96.429	ENSMZEG00005006498	-	98	97.525	Maylandia_zebra
ENSONIG00000017705	LARP4B	94	97.241	ENSMZEG00005014594	-	100	97.241	Maylandia_zebra
ENSONIG00000017705	LARP4B	100	59.160	ENSMGAG00000005472	LARP4B	100	59.264	Meleagris_gallopavo
ENSONIG00000017705	LARP4B	100	58.718	ENSMAUG00000021657	Larp4b	100	64.346	Mesocricetus_auratus
ENSONIG00000017705	LARP4B	100	56.662	ENSMICG00000001301	LARP4B	100	56.427	Microcebus_murinus
ENSONIG00000017705	LARP4B	90	63.328	ENSMOCG00000021452	Larp4b	100	62.925	Microtus_ochrogaster
ENSONIG00000017705	LARP4B	86	96.552	ENSMMOG00000011253	-	94	81.159	Mola_mola
ENSONIG00000017705	LARP4B	100	58.175	ENSMODG00000005957	LARP4B	100	56.838	Monodelphis_domestica
ENSONIG00000017705	LARP4B	100	66.580	ENSMALG00000012432	LARP4B	100	66.321	Monopterus_albus
ENSONIG00000017705	LARP4B	100	59.126	MGP_CAROLIEiJ_G0018216	Larp4b	100	64.334	Mus_caroli
ENSONIG00000017705	LARP4B	100	59.283	ENSMUSG00000033499	Larp4b	100	63.069	Mus_musculus
ENSONIG00000017705	LARP4B	100	59.383	MGP_PahariEiJ_G0019266	Larp4b	100	63.514	Mus_pahari
ENSONIG00000017705	LARP4B	100	59.283	MGP_SPRETEiJ_G0019074	Larp4b	100	63.238	Mus_spretus
ENSONIG00000017705	LARP4B	100	57.400	ENSMPUG00000016220	LARP4B	97	57.658	Mustela_putorius_furo
ENSONIG00000017705	LARP4B	88	58.601	ENSMLUG00000005880	LARP4B	100	56.474	Myotis_lucifugus
ENSONIG00000017705	LARP4B	100	59.126	ENSNGAG00000001750	Larp4b	100	58.355	Nannospalax_galili
ENSONIG00000017705	LARP4B	84	96.429	ENSNBRG00000020018	LARP4B	93	96.429	Neolamprologus_brichardi
ENSONIG00000017705	LARP4B	100	59.359	ENSNLEG00000013442	LARP4B	100	58.846	Nomascus_leucogenys
ENSONIG00000017705	LARP4B	84	48.469	ENSMEUG00000013114	-	83	47.959	Notamacropus_eugenii
ENSONIG00000017705	LARP4B	100	56.616	ENSOPRG00000003300	LARP4B	100	56.107	Ochotona_princeps
ENSONIG00000017705	LARP4B	100	55.385	ENSODEG00000001109	LARP4B	100	61.176	Octodon_degus
ENSONIG00000017705	LARP4B	100	58.883	ENSOANG00000006100	LARP4B	100	58.704	Ornithorhynchus_anatinus
ENSONIG00000017705	LARP4B	100	56.696	ENSOCUG00000004950	LARP4B	97	56.195	Oryctolagus_cuniculus
ENSONIG00000017705	LARP4B	100	83.871	ENSORLG00000006080	LARP4B	100	83.613	Oryzias_latipes
ENSONIG00000017705	LARP4B	100	83.247	ENSORLG00020020940	LARP4B	100	82.990	Oryzias_latipes_hni
ENSONIG00000017705	LARP4B	100	83.204	ENSORLG00015020608	LARP4B	100	82.946	Oryzias_latipes_hsok
ENSONIG00000017705	LARP4B	100	82.817	ENSOMEG00000019619	LARP4B	100	82.558	Oryzias_melastigma
ENSONIG00000017705	LARP4B	96	54.727	ENSOGAG00000011540	LARP4B	99	55.890	Otolemur_garnettii
ENSONIG00000017705	LARP4B	100	57.595	ENSOARG00000015320	LARP4B	98	56.835	Ovis_aries
ENSONIG00000017705	LARP4B	100	59.487	ENSPPAG00000039232	LARP4B	100	58.974	Pan_paniscus
ENSONIG00000017705	LARP4B	100	58.247	ENSPPRG00000009489	LARP4B	100	57.861	Panthera_pardus
ENSONIG00000017705	LARP4B	100	58.247	ENSPTIG00000008543	LARP4B	100	57.861	Panthera_tigris_altaica
ENSONIG00000017705	LARP4B	100	59.487	ENSPTRG00000002235	LARP4B	100	58.974	Pan_troglodytes
ENSONIG00000017705	LARP4B	100	59.487	ENSPANG00000023546	LARP4B	100	57.051	Papio_anubis
ENSONIG00000017705	LARP4B	98	60.784	ENSPKIG00000012368	LARP4B	96	60.554	Paramormyrops_kingsleyae
ENSONIG00000017705	LARP4B	75	70.938	ENSPSIG00000005600	LARP4B	99	70.312	Pelodiscus_sinensis
ENSONIG00000017705	LARP4B	98	60.995	ENSPMGG00000008261	LARP4B	87	71.453	Periophthalmus_magnuspinnatus
ENSONIG00000017705	LARP4B	100	58.247	ENSPEMG00000014052	Larp4b	100	57.786	Peromyscus_maniculatus_bairdii
ENSONIG00000017705	LARP4B	100	83.120	ENSPFOG00000000029	LARP4B	100	82.097	Poecilia_formosa
ENSONIG00000017705	LARP4B	100	83.248	ENSPLAG00000002871	LARP4B	100	82.609	Poecilia_latipinna
ENSONIG00000017705	LARP4B	100	82.759	ENSPMEG00000016361	LARP4B	100	81.737	Poecilia_mexicana
ENSONIG00000017705	LARP4B	100	58.387	ENSPPYG00000002035	LARP4B	97	57.928	Pongo_abelii
ENSONIG00000017705	LARP4B	100	58.140	ENSPCOG00000014688	LARP4B	100	57.623	Propithecus_coquereli
ENSONIG00000017705	LARP4B	83	56.610	ENSPVAG00000009784	LARP4B	83	56.752	Pteropus_vampyrus
ENSONIG00000017705	LARP4B	100	98.312	ENSPNYG00000024252	LARP4B	100	98.312	Pundamilia_nyererei
ENSONIG00000017705	LARP4B	94	54.743	ENSPNAG00000028956	larp4b	96	53.378	Pygocentrus_nattereri
ENSONIG00000017705	LARP4B	99	58.945	ENSRNOG00000015888	Larp4b	100	57.806	Rattus_norvegicus
ENSONIG00000017705	LARP4B	100	59.103	ENSRBIG00000033294	LARP4B	100	58.590	Rhinopithecus_bieti
ENSONIG00000017705	LARP4B	100	59.231	ENSRROG00000033879	LARP4B	100	58.718	Rhinopithecus_roxellana
ENSONIG00000017705	LARP4B	100	54.023	ENSSBOG00000021109	LARP4B	100	53.189	Saimiri_boliviensis_boliviensis
ENSONIG00000017705	LARP4B	100	59.335	ENSSHAG00000013392	LARP4B	100	59.155	Sarcophilus_harrisii
ENSONIG00000017705	LARP4B	92	63.448	ENSSFOG00015003256	LARP4B	93	60.579	Scleropages_formosus
ENSONIG00000017705	LARP4B	86	100.000	ENSSMAG00000005982	-	99	100.000	Scophthalmus_maximus
ENSONIG00000017705	LARP4B	100	91.613	ENSSDUG00000006704	LARP4B	100	91.613	Seriola_dumerili
ENSONIG00000017705	LARP4B	86	88.103	ENSSLDG00000020660	LARP4B	98	87.781	Seriola_lalandi_dorsalis
ENSONIG00000017705	LARP4B	67	85.047	ENSSARG00000001243	-	79	85.047	Sorex_araneus
ENSONIG00000017705	LARP4B	82	62.540	ENSSPUG00000013734	-	100	63.399	Sphenodon_punctatus
ENSONIG00000017705	LARP4B	100	59.173	ENSSPUG00000002102	-	100	58.065	Sphenodon_punctatus
ENSONIG00000017705	LARP4B	85	87.097	ENSSPAG00000014628	LARP4B	92	93.735	Stegastes_partitus
ENSONIG00000017705	LARP4B	100	58.537	ENSSSCG00000011162	LARP4B	97	62.810	Sus_scrofa
ENSONIG00000017705	LARP4B	100	60.687	ENSTGUG00000000811	-	100	60.356	Taeniopygia_guttata
ENSONIG00000017705	LARP4B	99	69.782	ENSTNIG00000007991	LARP4B	100	74.270	Tetraodon_nigroviridis
ENSONIG00000017705	LARP4B	100	71.851	ENSTNIG00000004571	-	98	71.594	Tetraodon_nigroviridis
ENSONIG00000017705	LARP4B	84	62.235	ENSTTRG00000011151	LARP4B	86	60.694	Tursiops_truncatus
ENSONIG00000017705	LARP4B	86	61.411	ENSUAMG00000016461	LARP4B	95	60.511	Ursus_americanus
ENSONIG00000017705	LARP4B	100	57.990	ENSUMAG00000016127	LARP4B	100	57.861	Ursus_maritimus
ENSONIG00000017705	LARP4B	100	57.861	ENSVVUG00000008641	LARP4B	100	66.745	Vulpes_vulpes
ENSONIG00000017705	LARP4B	99	60.714	ENSXETG00000016882	larp4b	100	60.332	Xenopus_tropicalis
ENSONIG00000017705	LARP4B	100	69.202	ENSXCOG00000019952	LARP4B	100	68.830	Xiphophorus_couchianus
ENSONIG00000017705	LARP4B	100	82.971	ENSXMAG00000021533	LARP4B	100	81.946	Xiphophorus_maculatus