EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSONIG00000017737 (Gene tree)
Gene ID: 100698002
Gene Symbol: sfpq
Alias: -
Full Name: splicing factor proline/glutamine-rich
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Minus strand
Length: 18942 bases
Position: chrGL831441.1:406410-425351
Accession: ZDB-GENE-040426-2452
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000022362	RRM_1	PF00076.22	1.2e-30	1	2
ENSONIP00000022362	RRM_1	PF00076.22	1.2e-30	2	2
ENSONIP00000022363	RRM_1	PF00076.22	1.3e-30	1	2
ENSONIP00000022363	RRM_1	PF00076.22	1.3e-30	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000022383	-	2010	-	ENSONIP00000022363	669 (aa)	-	I3KML8
ENSONIT00000022382	-	2338	-	ENSONIP00000022362	640 (aa)	-	I3KML7

Gene Model

Click here to download ENSONIG00000017737's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000017737's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSONIG00000017737	sfpq	60	58.056	ENSONIG00000012010	pspc1	87	55.066
ENSONIG00000017737	sfpq	59	59.474	ENSONIG00000020497	nono	83	62.735

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000017737	sfpq	63	74.661	ENSG00000116560	SFPQ	89	75.377	Homo_sapiens
ENSONIG00000017737	sfpq	70	85.745	ENSAPOG00000024257	sfpq	100	78.530	Acanthochromis_polyacanthus
ENSONIG00000017737	sfpq	63	74.376	ENSAMEG00000000815	SFPQ	100	74.150	Ailuropoda_melanoleuca
ENSONIG00000017737	sfpq	99	82.467	ENSACIG00000000905	sfpq	100	82.318	Amphilophus_citrinellus
ENSONIG00000017737	sfpq	71	84.519	ENSAOCG00000002889	sfpq	100	76.545	Amphiprion_ocellaris
ENSONIG00000017737	sfpq	71	84.519	ENSAPEG00000016556	sfpq	100	76.545	Amphiprion_percula
ENSONIG00000017737	sfpq	100	74.189	ENSATEG00000002981	sfpq	100	77.071	Anabas_testudineus
ENSONIG00000017737	sfpq	59	66.176	ENSANAG00000027438	-	68	61.086	Aotus_nancymaae
ENSONIG00000017737	sfpq	50	51.549	ENSANAG00000021268	-	100	51.412	Aotus_nancymaae
ENSONIG00000017737	sfpq	50	55.429	ENSANAG00000037798	-	99	54.286	Aotus_nancymaae
ENSONIG00000017737	sfpq	100	95.840	ENSACLG00000022332	sfpq	100	96.160	Astatotilapia_calliptera
ENSONIG00000017737	sfpq	63	80.562	ENSAMXG00000011538	sfpq	85	65.313	Astyanax_mexicanus
ENSONIG00000017737	sfpq	63	74.661	ENSBTAG00000016328	SFPQ	63	74.099	Bos_taurus
ENSONIG00000017737	sfpq	63	69.318	ENSCAFG00000017608	-	67	66.524	Canis_familiaris
ENSONIG00000017737	sfpq	63	74.434	ENSCAFG00000003595	-	67	74.775	Canis_familiaris
ENSONIG00000017737	sfpq	63	70.975	ENSCAFG00000018271	-	71	66.949	Canis_familiaris
ENSONIG00000017737	sfpq	50	66.857	ENSCAFG00020010702	-	100	67.052	Canis_lupus_dingo
ENSONIG00000017737	sfpq	63	70.975	ENSCAFG00020004881	-	66	70.136	Canis_lupus_dingo
ENSONIG00000017737	sfpq	57	80.601	ENSCHIG00000023097	SFPQ	62	74.099	Capra_hircus
ENSONIG00000017737	sfpq	50	72.443	ENSTSYG00000037120	-	100	72.159	Carlito_syrichta
ENSONIG00000017737	sfpq	50	64.387	ENSCPOG00000015018	-	100	63.912	Cavia_porcellus
ENSONIG00000017737	sfpq	63	50.780	ENSCATG00000032664	-	61	49.220	Cercocebus_atys
ENSONIG00000017737	sfpq	57	78.142	ENSCATG00000036179	-	55	76.378	Cercocebus_atys
ENSONIG00000017737	sfpq	50	72.443	ENSCLAG00000009583	-	100	72.159	Chinchilla_lanigera
ENSONIG00000017737	sfpq	63	74.661	ENSCSAG00000001082	SFPQ	63	74.099	Chlorocebus_sabaeus
ENSONIG00000017737	sfpq	54	72.966	ENSCHOG00000009131	SFPQ	100	73.753	Choloepus_hoffmanni
ENSONIG00000017737	sfpq	65	71.272	ENSCPBG00000018674	SFPQ	70	71.491	Chrysemys_picta_bellii
ENSONIG00000017737	sfpq	50	72.443	ENSCANG00000028087	-	100	72.159	Colobus_angolensis_palliatus
ENSONIG00000017737	sfpq	64	73.874	ENSCGRG00001011698	Sfpq	63	73.649	Cricetulus_griseus_chok1gshd
ENSONIG00000017737	sfpq	62	74.419	ENSCGRG00000010128	Sfpq	95	74.246	Cricetulus_griseus_crigri
ENSONIG00000017737	sfpq	99	68.268	ENSCSEG00000007852	sfpq	100	69.457	Cynoglossus_semilaevis
ENSONIG00000017737	sfpq	99	65.554	ENSCVAG00000019538	sfpq	100	65.775	Cyprinodon_variegatus
ENSONIG00000017737	sfpq	63	78.037	ENSDARG00000011564	sfpq	100	85.217	Danio_rerio
ENSONIG00000017737	sfpq	63	74.661	ENSDNOG00000049454	SFPQ	78	61.302	Dasypus_novemcinctus
ENSONIG00000017737	sfpq	63	74.434	ENSDORG00000008109	Sfpq	63	74.099	Dipodomys_ordii
ENSONIG00000017737	sfpq	62	68.445	ENSETEG00000001095	SFPQ	61	65.688	Echinops_telfairi
ENSONIG00000017737	sfpq	57	80.601	ENSEASG00005012012	SFPQ	63	74.099	Equus_asinus_asinus
ENSONIG00000017737	sfpq	57	80.601	ENSECAG00000000642	SFPQ	63	74.099	Equus_caballus
ENSONIG00000017737	sfpq	65	78.032	ENSELUG00000023145	sfpq	92	63.133	Esox_lucius
ENSONIG00000017737	sfpq	63	74.661	ENSFCAG00000042862	SFPQ	63	74.099	Felis_catus
ENSONIG00000017737	sfpq	50	71.591	ENSFALG00000000731	SFPQ	100	70.739	Ficedula_albicollis
ENSONIG00000017737	sfpq	50	63.739	ENSFDAG00000017723	-	100	65.439	Fukomys_damarensis
ENSONIG00000017737	sfpq	100	64.771	ENSFHEG00000015200	sfpq	100	72.509	Fundulus_heteroclitus
ENSONIG00000017737	sfpq	62	82.100	ENSGMOG00000011957	sfpq	66	81.176	Gadus_morhua
ENSONIG00000017737	sfpq	80	83.771	ENSGMOG00000011950	SFPQ	99	83.771	Gadus_morhua
ENSONIG00000017737	sfpq	100	69.412	ENSGAFG00000014571	sfpq	100	69.350	Gambusia_affinis
ENSONIG00000017737	sfpq	99	75.000	ENSGACG00000002034	sfpq	100	74.408	Gasterosteus_aculeatus
ENSONIG00000017737	sfpq	62	74.942	ENSGGOG00000026354	SFPQ	100	72.159	Gorilla_gorilla
ENSONIG00000017737	sfpq	100	95.840	ENSHBUG00000016818	sfpq	100	96.160	Haplochromis_burtoni
ENSONIG00000017737	sfpq	63	73.933	ENSHGLG00000012001	SFPQ	64	73.378	Heterocephalus_glaber_female
ENSONIG00000017737	sfpq	50	72.443	ENSHGLG00100004136	-	100	72.159	Heterocephalus_glaber_male
ENSONIG00000017737	sfpq	88	76.077	ENSHCOG00000008612	sfpq	100	76.077	Hippocampus_comes
ENSONIG00000017737	sfpq	64	77.030	ENSIPUG00000013076	SFPQ	74	76.566	Ictalurus_punctatus
ENSONIG00000017737	sfpq	50	72.443	ENSSTOG00000014004	-	100	72.159	Ictidomys_tridecemlineatus
ENSONIG00000017737	sfpq	63	74.434	ENSJJAG00000015633	Sfpq	63	74.099	Jaculus_jaculus
ENSONIG00000017737	sfpq	100	79.036	ENSKMAG00000000238	sfpq	88	77.626	Kryptolebias_marmoratus
ENSONIG00000017737	sfpq	100	69.822	ENSLBEG00000003163	sfpq	98	70.128	Labrus_bergylta
ENSONIG00000017737	sfpq	63	71.298	ENSLACG00000014728	SFPQ	70	71.926	Latimeria_chalumnae
ENSONIG00000017737	sfpq	89	60.658	ENSLOCG00000001067	sfpq	65	82.240	Lepisosteus_oculatus
ENSONIG00000017737	sfpq	63	74.434	ENSLAFG00000015951	SFPQ	70	72.973	Loxodonta_africana
ENSONIG00000017737	sfpq	63	74.661	ENSMFAG00000000797	SFPQ	63	74.099	Macaca_fascicularis
ENSONIG00000017737	sfpq	63	74.661	ENSMMUG00000019154	SFPQ	63	74.099	Macaca_mulatta
ENSONIG00000017737	sfpq	63	74.661	ENSMNEG00000038895	SFPQ	63	74.099	Macaca_nemestrina
ENSONIG00000017737	sfpq	50	69.602	ENSMLEG00000010643	-	100	70.455	Mandrillus_leucophaeus
ENSONIG00000017737	sfpq	100	76.625	ENSMAMG00000007875	sfpq	100	77.596	Mastacembelus_armatus
ENSONIG00000017737	sfpq	100	96.880	ENSMZEG00005026091	sfpq	100	97.160	Maylandia_zebra
ENSONIG00000017737	sfpq	51	75.893	ENSMGAG00000004237	SFPQ	100	69.898	Meleagris_gallopavo
ENSONIG00000017737	sfpq	64	73.649	ENSMAUG00000006402	Sfpq	63	73.649	Mesocricetus_auratus
ENSONIG00000017737	sfpq	63	74.434	ENSMICG00000027265	SFPQ	63	74.099	Microcebus_murinus
ENSONIG00000017737	sfpq	64	70.721	ENSMOCG00000019075	Sfpq	91	71.396	Microtus_ochrogaster
ENSONIG00000017737	sfpq	99	78.190	ENSMMOG00000001074	sfpq	100	74.889	Mola_mola
ENSONIG00000017737	sfpq	63	74.150	ENSMODG00000017937	SFPQ	65	74.830	Monodelphis_domestica
ENSONIG00000017737	sfpq	99	74.408	ENSMALG00000010381	sfpq	100	73.373	Monopterus_albus
ENSONIG00000017737	sfpq	57	79.781	MGP_CAROLIEiJ_G0026487	Sfpq	63	73.423	Mus_caroli
ENSONIG00000017737	sfpq	57	79.781	ENSMUSG00000028820	Sfpq	63	73.423	Mus_musculus
ENSONIG00000017737	sfpq	63	73.982	MGP_PahariEiJ_G0028818	Sfpq	63	73.423	Mus_pahari
ENSONIG00000017737	sfpq	57	79.781	MGP_SPRETEiJ_G0027466	Sfpq	63	73.423	Mus_spretus
ENSONIG00000017737	sfpq	63	73.636	ENSMLUG00000027090	SFPQ	98	73.409	Myotis_lucifugus
ENSONIG00000017737	sfpq	57	80.055	ENSNGAG00000000888	Sfpq	63	73.649	Nannospalax_galili
ENSONIG00000017737	sfpq	100	96.412	ENSNBRG00000017479	sfpq	100	96.712	Neolamprologus_brichardi
ENSONIG00000017737	sfpq	50	72.443	ENSNLEG00000035521	-	100	72.159	Nomascus_leucogenys
ENSONIG00000017737	sfpq	63	74.201	ENSMEUG00000014082	SFPQ	63	74.830	Notamacropus_eugenii
ENSONIG00000017737	sfpq	63	74.091	ENSOPRG00000013696	SFPQ	64	73.289	Ochotona_princeps
ENSONIG00000017737	sfpq	53	73.077	ENSODEG00000005485	SFPQ	91	57.746	Octodon_degus
ENSONIG00000017737	sfpq	50	73.219	ENSOANG00000008789	-	100	72.934	Ornithorhynchus_anatinus
ENSONIG00000017737	sfpq	63	74.318	ENSOCUG00000001877	SFPQ	86	75.000	Oryctolagus_cuniculus
ENSONIG00000017737	sfpq	100	68.474	ENSORLG00000007459	sfpq	100	70.110	Oryzias_latipes
ENSONIG00000017737	sfpq	99	69.410	ENSORLG00020011818	sfpq	100	70.289	Oryzias_latipes_hni
ENSONIG00000017737	sfpq	99	68.904	ENSORLG00015002131	sfpq	100	70.330	Oryzias_latipes_hsok
ENSONIG00000017737	sfpq	100	68.776	ENSOMEG00000018020	sfpq	100	68.835	Oryzias_melastigma
ENSONIG00000017737	sfpq	63	74.434	ENSOGAG00000027710	SFPQ	84	74.775	Otolemur_garnettii
ENSONIG00000017737	sfpq	62	74.942	ENSOARG00000019439	SFPQ	66	74.710	Ovis_aries
ENSONIG00000017737	sfpq	63	74.434	ENSPPAG00000030078	SFPQ	62	74.099	Pan_paniscus
ENSONIG00000017737	sfpq	50	72.238	ENSPPRG00000015478	-	100	71.955	Panthera_pardus
ENSONIG00000017737	sfpq	50	72.443	ENSPTIG00000007710	-	100	72.159	Panthera_tigris_altaica
ENSONIG00000017737	sfpq	63	69.005	ENSPTRG00000000518	SFPQ	61	68.468	Pan_troglodytes
ENSONIG00000017737	sfpq	63	74.434	ENSPANG00000005380	SFPQ	66	74.775	Papio_anubis
ENSONIG00000017737	sfpq	83	66.904	ENSPKIG00000023035	sfpq	73	81.604	Paramormyrops_kingsleyae
ENSONIG00000017737	sfpq	62	74.710	ENSPSIG00000011494	SFPQ	99	73.550	Pelodiscus_sinensis
ENSONIG00000017737	sfpq	99	66.617	ENSPMGG00000023883	sfpq	100	62.135	Periophthalmus_magnuspinnatus
ENSONIG00000017737	sfpq	64	73.649	ENSPEMG00000009794	Sfpq	91	74.324	Peromyscus_maniculatus_bairdii
ENSONIG00000017737	sfpq	64	74.041	ENSPCIG00000000923	SFPQ	63	74.718	Phascolarctos_cinereus
ENSONIG00000017737	sfpq	99	67.211	ENSPFOG00000003127	sfpq	100	72.855	Poecilia_formosa
ENSONIG00000017737	sfpq	100	67.149	ENSPREG00000008060	sfpq	100	67.867	Poecilia_reticulata
ENSONIG00000017737	sfpq	63	74.661	ENSPPYG00000001560	SFPQ	63	74.099	Pongo_abelii
ENSONIG00000017737	sfpq	55	81.197	ENSPCAG00000006164	SFPQ	60	75.116	Procavia_capensis
ENSONIG00000017737	sfpq	63	74.434	ENSPCOG00000027127	SFPQ	63	74.099	Propithecus_coquereli
ENSONIG00000017737	sfpq	64	72.624	ENSPVAG00000001865	SFPQ	63	72.172	Pteropus_vampyrus
ENSONIG00000017737	sfpq	99	94.891	ENSPNYG00000007494	sfpq	100	94.599	Pundamilia_nyererei
ENSONIG00000017737	sfpq	91	65.224	ENSPNAG00000002128	sfpq	89	69.384	Pygocentrus_nattereri
ENSONIG00000017737	sfpq	63	73.982	ENSRNOG00000058461	Sfpq	63	73.756	Rattus_norvegicus
ENSONIG00000017737	sfpq	63	67.873	ENSRBIG00000035286	SFPQ	100	72.159	Rhinopithecus_bieti
ENSONIG00000017737	sfpq	63	74.434	ENSRROG00000040992	SFPQ	100	72.159	Rhinopithecus_roxellana
ENSONIG00000017737	sfpq	50	72.443	ENSSBOG00000024972	-	100	72.159	Saimiri_boliviensis_boliviensis
ENSONIG00000017737	sfpq	59	76.623	ENSSHAG00000016107	-	96	70.312	Sarcophilus_harrisii
ENSONIG00000017737	sfpq	50	70.286	ENSSHAG00000012312	-	100	69.143	Sarcophilus_harrisii
ENSONIG00000017737	sfpq	72	72.299	ENSSFOG00015009289	sfpq	84	76.790	Scleropages_formosus
ENSONIG00000017737	sfpq	99	73.538	ENSSMAG00000018201	sfpq	100	73.977	Scophthalmus_maximus
ENSONIG00000017737	sfpq	99	80.060	ENSSDUG00000008402	sfpq	100	79.613	Seriola_dumerili
ENSONIG00000017737	sfpq	100	78.947	ENSSLDG00000018917	sfpq	100	79.377	Seriola_lalandi_dorsalis
ENSONIG00000017737	sfpq	52	73.713	ENSSARG00000006409	SFPQ	100	73.442	Sorex_araneus
ENSONIG00000017737	sfpq	100	80.428	ENSSPAG00000016550	sfpq	100	82.396	Stegastes_partitus
ENSONIG00000017737	sfpq	57	80.601	ENSSSCG00000035690	SFPQ	63	74.099	Sus_scrofa
ENSONIG00000017737	sfpq	62	74.014	ENSTGUG00000001722	SFPQ	99	73.318	Taeniopygia_guttata
ENSONIG00000017737	sfpq	99	72.046	ENSTRUG00000003783	sfpq	100	75.185	Takifugu_rubripes
ENSONIG00000017737	sfpq	87	76.068	ENSTNIG00000011331	sfpq	99	69.841	Tetraodon_nigroviridis
ENSONIG00000017737	sfpq	63	72.045	ENSTTRG00000013930	SFPQ	63	71.558	Tursiops_truncatus
ENSONIG00000017737	sfpq	50	70.170	ENSUMAG00000008056	-	100	69.886	Ursus_maritimus
ENSONIG00000017737	sfpq	50	66.189	ENSVVUG00000000874	-	100	66.762	Vulpes_vulpes
ENSONIG00000017737	sfpq	68	65.833	ENSXETG00000009682	sfpq	98	78.371	Xenopus_tropicalis
ENSONIG00000017737	sfpq	100	68.222	ENSXMAG00000016391	sfpq	100	68.668	Xiphophorus_maculatus