EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSONIG00000017875 (Gene tree)
Gene ID: 100691633
Gene Symbol: si:ch211-153b23.4
Alias: -
Full Name: si:ch211-153b23.4
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Plus strand
Length: 5285 bases
Position: chrGL831174.1:4209040-4214324
Accession: ZDB-GENE-030131-7332
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000022530	Sua5_yciO_yrdC	PF01300.18	2.5e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000022550	-	3791	-	ENSONIP00000022530	874 (aa)	-	I3KN35

Gene Model

Click here to download ENSONIG00000017875's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000017875's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000017875	si:ch211-153b23.4	100	77.829	ENSAPOG00000006178	si:ch211-153b23.4	99	77.600	Acanthochromis_polyacanthus
ENSONIG00000017875	si:ch211-153b23.4	94	80.704	ENSAPOG00000006144	si:ch211-153b23.4	94	81.660	Acanthochromis_polyacanthus
ENSONIG00000017875	si:ch211-153b23.4	56	45.833	ENSACIG00000006968	si:ch211-153b23.3	55	45.833	Amphilophus_citrinellus
ENSONIG00000017875	si:ch211-153b23.4	96	88.228	ENSACIG00000006997	si:ch211-153b23.4	99	88.228	Amphilophus_citrinellus
ENSONIG00000017875	si:ch211-153b23.4	59	33.022	ENSAOCG00000010974	si:ch211-153b23.3	59	33.022	Amphiprion_ocellaris
ENSONIG00000017875	si:ch211-153b23.4	91	77.250	ENSAOCG00000010999	si:ch211-153b23.4	97	77.250	Amphiprion_ocellaris
ENSONIG00000017875	si:ch211-153b23.4	59	32.714	ENSAPEG00000014700	si:ch211-153b23.3	59	32.714	Amphiprion_percula
ENSONIG00000017875	si:ch211-153b23.4	97	77.400	ENSAPEG00000014665	si:ch211-153b23.4	99	77.400	Amphiprion_percula
ENSONIG00000017875	si:ch211-153b23.4	100	80.914	ENSATEG00000004948	si:ch211-153b23.4	99	80.914	Anabas_testudineus
ENSONIG00000017875	si:ch211-153b23.4	59	32.453	ENSATEG00000004956	si:ch211-153b23.3	58	32.453	Anabas_testudineus
ENSONIG00000017875	si:ch211-153b23.4	93	59.318	ENSAPLG00000013596	-	99	59.318	Anas_platyrhynchos
ENSONIG00000017875	si:ch211-153b23.4	59	33.581	ENSACLG00000005894	si:ch211-153b23.3	59	33.581	Astatotilapia_calliptera
ENSONIG00000017875	si:ch211-153b23.4	100	97.712	ENSACLG00000005471	si:ch211-153b23.4	99	97.712	Astatotilapia_calliptera
ENSONIG00000017875	si:ch211-153b23.4	97	69.412	ENSAMXG00000013879	si:ch211-153b23.4	100	69.412	Astyanax_mexicanus
ENSONIG00000017875	si:ch211-153b23.4	96	77.738	ENSCSEG00000014838	si:ch211-153b23.4	99	77.738	Cynoglossus_semilaevis
ENSONIG00000017875	si:ch211-153b23.4	59	34.026	ENSCSEG00000014853	si:ch211-153b23.3	58	34.026	Cynoglossus_semilaevis
ENSONIG00000017875	si:ch211-153b23.4	93	81.335	ENSCVAG00000021145	si:ch211-153b23.4	100	81.335	Cyprinodon_variegatus
ENSONIG00000017875	si:ch211-153b23.4	99	68.772	ENSDARG00000077169	si:ch211-153b23.4	99	68.772	Danio_rerio
ENSONIG00000017875	si:ch211-153b23.4	99	67.935	ENSELUG00000004961	si:ch211-153b23.4	97	67.935	Esox_lucius
ENSONIG00000017875	si:ch211-153b23.4	93	56.426	ENSFALG00000011343	-	94	56.426	Ficedula_albicollis
ENSONIG00000017875	si:ch211-153b23.4	92	81.149	ENSFHEG00000010001	si:ch211-153b23.4	100	81.149	Fundulus_heteroclitus
ENSONIG00000017875	si:ch211-153b23.4	84	85.281	ENSFHEG00000009888	si:ch211-153b23.4	82	85.281	Fundulus_heteroclitus
ENSONIG00000017875	si:ch211-153b23.4	59	33.459	ENSGAFG00000007455	si:ch211-153b23.3	59	33.459	Gambusia_affinis
ENSONIG00000017875	si:ch211-153b23.4	89	80.233	ENSGAFG00000007442	si:ch211-153b23.4	93	80.233	Gambusia_affinis
ENSONIG00000017875	si:ch211-153b23.4	96	79.478	ENSGACG00000018253	si:ch211-153b23.4	99	79.478	Gasterosteus_aculeatus
ENSONIG00000017875	si:ch211-153b23.4	80	62.804	ENSGAGG00000024601	-	98	61.119	Gopherus_agassizii
ENSONIG00000017875	si:ch211-153b23.4	59	33.581	ENSHBUG00000001760	si:ch211-153b23.3	59	33.581	Haplochromis_burtoni
ENSONIG00000017875	si:ch211-153b23.4	77	97.028	ENSHBUG00000000013	si:ch211-153b23.4	89	97.028	Haplochromis_burtoni
ENSONIG00000017875	si:ch211-153b23.4	95	70.312	ENSIPUG00000015205	si:ch211-153b23.4	99	70.312	Ictalurus_punctatus
ENSONIG00000017875	si:ch211-153b23.4	100	80.000	ENSKMAG00000006919	-	99	80.000	Kryptolebias_marmoratus
ENSONIG00000017875	si:ch211-153b23.4	93	82.822	ENSKMAG00000006829	si:ch211-153b23.4	100	82.822	Kryptolebias_marmoratus
ENSONIG00000017875	si:ch211-153b23.4	66	31.104	ENSKMAG00000006792	si:ch211-153b23.3	66	31.104	Kryptolebias_marmoratus
ENSONIG00000017875	si:ch211-153b23.4	59	32.765	ENSLBEG00000026324	si:ch211-153b23.3	56	32.765	Labrus_bergylta
ENSONIG00000017875	si:ch211-153b23.4	100	79.086	ENSLBEG00000026309	si:ch211-153b23.4	100	79.086	Labrus_bergylta
ENSONIG00000017875	si:ch211-153b23.4	71	30.046	ENSLACG00000005800	-	77	30.046	Latimeria_chalumnae
ENSONIG00000017875	si:ch211-153b23.4	94	63.183	ENSLACG00000017592	si:ch211-153b23.4	98	63.183	Latimeria_chalumnae
ENSONIG00000017875	si:ch211-153b23.4	59	32.129	ENSMAMG00000009328	si:ch211-153b23.3	58	32.129	Mastacembelus_armatus
ENSONIG00000017875	si:ch211-153b23.4	94	84.531	ENSMAMG00000009277	si:ch211-153b23.4	99	84.531	Mastacembelus_armatus
ENSONIG00000017875	si:ch211-153b23.4	94	84.737	ENSMAMG00000009358	si:ch211-153b23.4	100	84.737	Mastacembelus_armatus
ENSONIG00000017875	si:ch211-153b23.4	94	97.808	ENSMZEG00005011433	si:ch211-153b23.4	100	97.808	Maylandia_zebra
ENSONIG00000017875	si:ch211-153b23.4	59	33.581	ENSMZEG00005011450	si:ch211-153b23.3	59	33.581	Maylandia_zebra
ENSONIG00000017875	si:ch211-153b23.4	93	59.390	ENSMGAG00000005478	-	99	59.390	Meleagris_gallopavo
ENSONIG00000017875	si:ch211-153b23.4	93	81.706	ENSMMOG00000004425	si:ch211-153b23.4	100	81.706	Mola_mola
ENSONIG00000017875	si:ch211-153b23.4	59	33.766	ENSNBRG00000013370	si:ch211-153b23.3	59	33.766	Neolamprologus_brichardi
ENSONIG00000017875	si:ch211-153b23.4	91	97.742	ENSNBRG00000013392	si:ch211-153b23.4	100	97.742	Neolamprologus_brichardi
ENSONIG00000017875	si:ch211-153b23.4	99	77.778	ENSORLG00000006169	si:ch211-153b23.4	99	77.778	Oryzias_latipes
ENSONIG00000017875	si:ch211-153b23.4	71	31.406	ENSORLG00000006161	si:ch211-153b23.3	73	31.406	Oryzias_latipes
ENSONIG00000017875	si:ch211-153b23.4	99	78.121	ENSORLG00020009905	si:ch211-153b23.4	99	78.121	Oryzias_latipes_hni
ENSONIG00000017875	si:ch211-153b23.4	68	30.882	ENSORLG00020000910	si:ch211-153b23.3	72	30.882	Oryzias_latipes_hni
ENSONIG00000017875	si:ch211-153b23.4	99	77.663	ENSORLG00015003709	si:ch211-153b23.4	99	77.663	Oryzias_latipes_hsok
ENSONIG00000017875	si:ch211-153b23.4	68	30.894	ENSORLG00015003698	si:ch211-153b23.3	72	30.894	Oryzias_latipes_hsok
ENSONIG00000017875	si:ch211-153b23.4	58	33.843	ENSOMEG00000007661	si:ch211-153b23.3	59	33.843	Oryzias_melastigma
ENSONIG00000017875	si:ch211-153b23.4	98	78.246	ENSOMEG00000007682	si:ch211-153b23.4	99	78.046	Oryzias_melastigma
ENSONIG00000017875	si:ch211-153b23.4	98	65.197	ENSPKIG00000014429	si:ch211-153b23.4	99	65.197	Paramormyrops_kingsleyae
ENSONIG00000017875	si:ch211-153b23.4	98	68.341	ENSPKIG00000025681	si:ch211-153b23.4	99	68.341	Paramormyrops_kingsleyae
ENSONIG00000017875	si:ch211-153b23.4	56	32.454	ENSPKIG00000022450	si:ch211-153b23.3	56	32.454	Paramormyrops_kingsleyae
ENSONIG00000017875	si:ch211-153b23.4	94	62.878	ENSPMGG00000001313	si:ch211-153b23.4	92	62.878	Periophthalmus_magnuspinnatus
ENSONIG00000017875	si:ch211-153b23.4	77	82.891	ENSPFOG00000012164	si:ch211-153b23.4	95	82.891	Poecilia_formosa
ENSONIG00000017875	si:ch211-153b23.4	59	33.648	ENSPFOG00000012289	si:ch211-153b23.3	59	33.648	Poecilia_formosa
ENSONIG00000017875	si:ch211-153b23.4	92	80.473	ENSPLAG00000016295	si:ch211-153b23.4	99	80.473	Poecilia_latipinna
ENSONIG00000017875	si:ch211-153b23.4	59	33.586	ENSPLAG00000016320	si:ch211-153b23.3	59	33.586	Poecilia_latipinna
ENSONIG00000017875	si:ch211-153b23.4	59	33.270	ENSPMEG00000008884	si:ch211-153b23.3	59	33.270	Poecilia_mexicana
ENSONIG00000017875	si:ch211-153b23.4	89	79.129	ENSPMEG00000007538	si:ch211-153b23.4	95	79.129	Poecilia_mexicana
ENSONIG00000017875	si:ch211-153b23.4	94	97.564	ENSPNYG00000000250	si:ch211-153b23.4	100	97.564	Pundamilia_nyererei
ENSONIG00000017875	si:ch211-153b23.4	59	33.581	ENSPNYG00000000251	si:ch211-153b23.3	59	33.581	Pundamilia_nyererei
ENSONIG00000017875	si:ch211-153b23.4	59	32.061	ENSPNAG00000019592	si:ch211-153b23.3	57	32.061	Pygocentrus_nattereri
ENSONIG00000017875	si:ch211-153b23.4	98	70.945	ENSPNAG00000019554	si:ch211-153b23.4	97	70.945	Pygocentrus_nattereri
ENSONIG00000017875	si:ch211-153b23.4	99	70.332	ENSSFOG00015010891	si:ch211-153b23.4	99	70.332	Scleropages_formosus
ENSONIG00000017875	si:ch211-153b23.4	59	33.206	ENSSFOG00015010910	si:ch211-153b23.3	58	33.206	Scleropages_formosus
ENSONIG00000017875	si:ch211-153b23.4	99	65.604	ENSSFOG00015003920	-	99	65.604	Scleropages_formosus
ENSONIG00000017875	si:ch211-153b23.4	100	79.977	ENSSMAG00000010067	si:ch211-153b23.4	100	79.977	Scophthalmus_maximus
ENSONIG00000017875	si:ch211-153b23.4	59	33.459	ENSSMAG00000005446	si:ch211-153b23.3	58	33.459	Scophthalmus_maximus
ENSONIG00000017875	si:ch211-153b23.4	93	83.189	ENSSDUG00000006671	si:ch211-153b23.4	100	83.189	Seriola_dumerili
ENSONIG00000017875	si:ch211-153b23.4	77	81.548	ENSSDUG00000006931	si:ch211-153b23.4	92	81.548	Seriola_dumerili
ENSONIG00000017875	si:ch211-153b23.4	87	78.846	ENSSDUG00000006842	si:ch211-153b23.4	97	78.846	Seriola_dumerili
ENSONIG00000017875	si:ch211-153b23.4	59	33.898	ENSSLDG00000008629	si:ch211-153b23.3	56	34.078	Seriola_lalandi_dorsalis
ENSONIG00000017875	si:ch211-153b23.4	93	58.384	ENSTGUG00000005499	-	99	58.384	Taeniopygia_guttata
ENSONIG00000017875	si:ch211-153b23.4	92	78.863	ENSTRUG00000003247	si:ch211-153b23.4	100	78.863	Takifugu_rubripes
ENSONIG00000017875	si:ch211-153b23.4	59	34.095	ENSTRUG00000020530	si:ch211-153b23.3	57	34.095	Takifugu_rubripes
ENSONIG00000017875	si:ch211-153b23.4	59	30.667	ENSTNIG00000008962	si:ch211-153b23.3	54	30.667	Tetraodon_nigroviridis
ENSONIG00000017875	si:ch211-153b23.4	95	77.509	ENSTNIG00000008958	si:ch211-153b23.4	99	77.509	Tetraodon_nigroviridis
ENSONIG00000017875	si:ch211-153b23.4	99	53.778	ENSXETG00000004489	-	98	53.778	Xenopus_tropicalis
ENSONIG00000017875	si:ch211-153b23.4	95	81.348	ENSXMAG00000021388	si:ch211-153b23.4	99	81.348	Xiphophorus_maculatus
ENSONIG00000017875	si:ch211-153b23.4	59	33.333	ENSXMAG00000029318	si:ch211-153b23.3	59	33.333	Xiphophorus_maculatus
ENSONIG00000017875	si:ch211-153b23.4	95	79.856	ENSXMAG00000009416	-	98	79.689	Xiphophorus_maculatus