EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSONIG00000017910 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Minus strand
Length: 1728 bases
Position: chrGL831283.1:33338-35065
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000022575	Las1	PF04031.13	4.1e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000022594	-	933	-	ENSONIP00000022574	310 (aa)	-	I3KN79
ENSONIT00000022595	-	486	-	ENSONIP00000022575	162 (aa)	-	I3KN80

Gene Model

Click here to download ENSONIG00000017910's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000017910's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSONIG00000017910	-	60	59.794	ENSONIG00000009145	-	60	59.794
ENSONIG00000017910	-	59	57.732	ENSONIG00000021108	-	53	57.732

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000017910	-	59	83.158	ENSACIG00000006110	-	83	83.158	Amphilophus_citrinellus
ENSONIG00000017910	-	54	81.609	ENSAOCG00000018705	-	61	81.609	Amphiprion_ocellaris
ENSONIG00000017910	-	54	81.609	ENSAPEG00000017704	-	61	81.609	Amphiprion_percula
ENSONIG00000017910	-	54	95.455	ENSACLG00000000371	-	81	95.455	Astatotilapia_calliptera
ENSONIG00000017910	-	54	93.182	ENSACLG00000000531	-	90	57.229	Astatotilapia_calliptera
ENSONIG00000017910	-	54	94.318	ENSACLG00000000546	-	90	57.831	Astatotilapia_calliptera
ENSONIG00000017910	-	56	76.667	ENSCVAG00000011585	-	83	76.667	Cyprinodon_variegatus
ENSONIG00000017910	-	54	77.011	ENSGAFG00000014822	-	82	77.011	Gambusia_affinis
ENSONIG00000017910	-	54	95.455	ENSHBUG00000002121	-	81	95.455	Haplochromis_burtoni
ENSONIG00000017910	-	56	75.824	ENSLBEG00000011597	-	72	75.824	Labrus_bergylta
ENSONIG00000017910	-	52	76.190	ENSMAMG00000015777	-	77	76.190	Mastacembelus_armatus
ENSONIG00000017910	-	81	67.424	ENSMZEG00005025843	-	52	67.424	Maylandia_zebra
ENSONIG00000017910	-	54	93.182	ENSMZEG00005025953	-	90	57.229	Maylandia_zebra
ENSONIG00000017910	-	54	95.455	ENSMZEG00005026525	-	81	95.455	Maylandia_zebra
ENSONIG00000017910	-	55	94.382	ENSMZEG00005002235	-	80	94.382	Maylandia_zebra
ENSONIG00000017910	-	54	77.011	ENSMMOG00000017364	-	61	77.011	Mola_mola
ENSONIG00000017910	-	50	96.296	ENSNBRG00000004074	-	76	96.296	Neolamprologus_brichardi
ENSONIG00000017910	-	57	65.217	ENSPMGG00000013885	-	88	65.217	Periophthalmus_magnuspinnatus
ENSONIG00000017910	-	56	78.022	ENSPMEG00000017983	-	88	78.022	Poecilia_mexicana
ENSONIG00000017910	-	56	78.022	ENSPREG00000005736	-	83	78.022	Poecilia_reticulata
ENSONIG00000017910	-	54	95.455	ENSPNYG00000024097	-	81	95.455	Pundamilia_nyererei
ENSONIG00000017910	-	62	36.634	ENSRNOG00000021748	Las1l	59	55.263	Rattus_norvegicus
ENSONIG00000017910	-	59	72.917	ENSSMAG00000001529	-	73	72.727	Scophthalmus_maximus
ENSONIG00000017910	-	55	78.652	ENSSDUG00000013831	-	68	78.652	Seriola_dumerili
ENSONIG00000017910	-	55	77.528	ENSSLDG00000001558	-	68	77.528	Seriola_lalandi_dorsalis
ENSONIG00000017910	-	62	59.406	ENSTGUG00000002840	-	54	59.406	Taeniopygia_guttata
ENSONIG00000017910	-	59	73.958	ENSTRUG00000020641	-	71	73.958	Takifugu_rubripes
ENSONIG00000017910	-	64	78.846	ENSTNIG00000003282	-	52	80.198	Tetraodon_nigroviridis
ENSONIG00000017910	-	54	77.011	ENSXCOG00000000961	-	68	77.011	Xiphophorus_couchianus
ENSONIG00000017910	-	54	77.011	ENSXMAG00000023987	-	82	77.011	Xiphophorus_maculatus