EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSONIG00000017991 (Gene tree)
Gene ID: 100696894
Gene Symbol: UPF2
Alias: -
Full Name: UPF2%2C regulator of nonsense mediated mRNA decay
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Minus strand
Length: 21341 bases
Position: chrGL831195.1:2972603-2993943
Accession: 100696894
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000022667	Upf2	PF04050.14	1.8e-31	1	1
ENSONIP00000022668	Upf2	PF04050.14	1.8e-31	1	1
ENSONIP00000022667	MIF4G	PF02854.19	1.6e-80	1	3
ENSONIP00000022667	MIF4G	PF02854.19	1.6e-80	2	3
ENSONIP00000022667	MIF4G	PF02854.19	1.6e-80	3	3
ENSONIP00000022668	MIF4G	PF02854.19	1.6e-80	1	3
ENSONIP00000022668	MIF4G	PF02854.19	1.6e-80	2	3
ENSONIP00000022668	MIF4G	PF02854.19	1.6e-80	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000022687	UPF2-201	6494	XM_005475819	ENSONIP00000022667	1275 (aa)	XP_005475876	I3KNH2
ENSONIT00000022688	UPF2-202	3828	-	ENSONIP00000022668	1276 (aa)	-	I3KNH3

Gene Model

Click here to download ENSONIG00000017991's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000017991's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000017991	UPF2	100	82.697	ENSG00000151461	UPF2	100	80.982	Homo_sapiens
ENSONIG00000017991	UPF2	99	89.977	ENSAPOG00000015837	UPF2	100	89.969	Acanthochromis_polyacanthus
ENSONIG00000017991	UPF2	100	83.151	ENSAMEG00000004586	UPF2	100	81.357	Ailuropoda_melanoleuca
ENSONIG00000017991	UPF2	99	98.115	ENSACIG00000018078	UPF2	100	98.115	Amphilophus_citrinellus
ENSONIG00000017991	UPF2	100	96.322	ENSAOCG00000016766	UPF2	100	96.322	Amphiprion_ocellaris
ENSONIG00000017991	UPF2	100	96.401	ENSAPEG00000019084	UPF2	100	96.401	Amphiprion_percula
ENSONIG00000017991	UPF2	100	96.479	ENSATEG00000021677	UPF2	99	96.479	Anabas_testudineus
ENSONIG00000017991	UPF2	100	78.710	ENSAPLG00000010287	UPF2	90	83.607	Anas_platyrhynchos
ENSONIG00000017991	UPF2	100	83.073	ENSACAG00000009259	UPF2	100	83.151	Anolis_carolinensis
ENSONIG00000017991	UPF2	91	79.263	ENSANAG00000028451	UPF2	93	79.334	Aotus_nancymaae
ENSONIG00000017991	UPF2	100	99.451	ENSACLG00000012696	UPF2	100	99.451	Astatotilapia_calliptera
ENSONIG00000017991	UPF2	99	89.367	ENSAMXG00000013700	UPF2	99	89.289	Astyanax_mexicanus
ENSONIG00000017991	UPF2	100	83.151	ENSBTAG00000000288	UPF2	100	81.435	Bos_taurus
ENSONIG00000017991	UPF2	100	82.449	ENSCJAG00000020685	UPF2	100	81.123	Callithrix_jacchus
ENSONIG00000017991	UPF2	100	83.229	ENSCAFG00000004839	UPF2	100	81.435	Canis_familiaris
ENSONIG00000017991	UPF2	95	87.245	ENSCAFG00020005882	UPF2	99	88.265	Canis_lupus_dingo
ENSONIG00000017991	UPF2	100	83.307	ENSCHIG00000020359	UPF2	100	81.435	Capra_hircus
ENSONIG00000017991	UPF2	100	82.917	ENSTSYG00000000935	UPF2	97	87.500	Carlito_syrichta
ENSONIG00000017991	UPF2	91	75.171	ENSCAPG00000016658	UPF2	95	74.829	Cavia_aperea
ENSONIG00000017991	UPF2	99	79.953	ENSCPOG00000008809	UPF2	100	79.245	Cavia_porcellus
ENSONIG00000017991	UPF2	100	76.246	ENSCCAG00000035991	UPF2	100	75.000	Cebus_capucinus
ENSONIG00000017991	UPF2	100	82.853	ENSCATG00000032679	UPF2	100	81.138	Cercocebus_atys
ENSONIG00000017991	UPF2	100	81.889	ENSCLAG00000011434	UPF2	100	81.187	Chinchilla_lanigera
ENSONIG00000017991	UPF2	100	82.853	ENSCSAG00000013372	UPF2	100	81.138	Chlorocebus_sabaeus
ENSONIG00000017991	UPF2	79	88.692	ENSCHOG00000000422	UPF2	81	88.692	Choloepus_hoffmanni
ENSONIG00000017991	UPF2	99	81.548	ENSCPBG00000027823	UPF2	100	81.562	Chrysemys_picta_bellii
ENSONIG00000017991	UPF2	79	49.951	ENSCSAVG00000007772	-	99	48.826	Ciona_savignyi
ENSONIG00000017991	UPF2	99	77.692	ENSCANG00000040396	UPF2	100	76.287	Colobus_angolensis_palliatus
ENSONIG00000017991	UPF2	100	82.436	ENSCGRG00001019347	Upf2	100	80.562	Cricetulus_griseus_chok1gshd
ENSONIG00000017991	UPF2	100	82.436	ENSCGRG00000017993	Upf2	100	80.562	Cricetulus_griseus_crigri
ENSONIG00000017991	UPF2	99	85.625	ENSCSEG00000003520	UPF2	99	85.322	Cynoglossus_semilaevis
ENSONIG00000017991	UPF2	99	93.927	ENSCVAG00000006167	UPF2	100	93.375	Cyprinodon_variegatus
ENSONIG00000017991	UPF2	100	82.995	ENSDNOG00000018160	UPF2	100	81.123	Dasypus_novemcinctus
ENSONIG00000017991	UPF2	100	82.683	ENSDORG00000002478	Upf2	100	80.889	Dipodomys_ordii
ENSONIG00000017991	UPF2	73	92.647	ENSETEG00000011583	-	62	92.647	Echinops_telfairi
ENSONIG00000017991	UPF2	64	73.154	ENSEBUG00000012448	-	93	68.460	Eptatretus_burgeri
ENSONIG00000017991	UPF2	100	82.279	ENSEASG00005019274	UPF2	100	81.577	Equus_asinus_asinus
ENSONIG00000017991	UPF2	100	82.279	ENSECAG00000017022	UPF2	100	81.577	Equus_caballus
ENSONIG00000017991	UPF2	82	75.472	ENSEEUG00000007819	UPF2	74	75.441	Erinaceus_europaeus
ENSONIG00000017991	UPF2	99	88.612	ENSELUG00000012014	UPF2	100	88.924	Esox_lucius
ENSONIG00000017991	UPF2	100	86.188	ENSFCAG00000005785	UPF2	100	81.279	Felis_catus
ENSONIG00000017991	UPF2	100	83.476	ENSFALG00000001889	UPF2	98	81.684	Ficedula_albicollis
ENSONIG00000017991	UPF2	100	81.499	ENSFDAG00000014348	UPF2	100	80.640	Fukomys_damarensis
ENSONIG00000017991	UPF2	99	94.085	ENSFHEG00000009826	UPF2	100	93.691	Fundulus_heteroclitus
ENSONIG00000017991	UPF2	91	89.974	ENSGMOG00000005557	UPF2	100	88.368	Gadus_morhua
ENSONIG00000017991	UPF2	100	84.412	ENSGALG00000033772	UPF2	100	82.541	Gallus_gallus
ENSONIG00000017991	UPF2	100	93.192	ENSGAFG00000020867	UPF2	100	92.801	Gambusia_affinis
ENSONIG00000017991	UPF2	99	93.052	ENSGACG00000001080	UPF2	100	93.599	Gasterosteus_aculeatus
ENSONIG00000017991	UPF2	100	82.619	ENSGAGG00000002700	UPF2	100	80.841	Gopherus_agassizii
ENSONIG00000017991	UPF2	100	82.697	ENSGGOG00000001479	UPF2	100	80.982	Gorilla_gorilla
ENSONIG00000017991	UPF2	100	99.530	ENSHBUG00000004249	UPF2	100	99.607	Haplochromis_burtoni
ENSONIG00000017991	UPF2	100	81.577	ENSHGLG00000015176	-	100	80.874	Heterocephalus_glaber_female
ENSONIG00000017991	UPF2	99	72.848	ENSHGLG00000003822	-	99	72.926	Heterocephalus_glaber_female
ENSONIG00000017991	UPF2	99	79.281	ENSHGLG00100010036	UPF2	100	78.091	Heterocephalus_glaber_male
ENSONIG00000017991	UPF2	100	90.725	ENSHCOG00000004025	UPF2	99	90.647	Hippocampus_comes
ENSONIG00000017991	UPF2	100	87.822	ENSIPUG00000015524	UPF2	100	85.781	Ictalurus_punctatus
ENSONIG00000017991	UPF2	100	82.917	ENSSTOG00000013075	UPF2	100	80.967	Ictidomys_tridecemlineatus
ENSONIG00000017991	UPF2	100	79.859	ENSJJAG00000004913	Upf2	100	80.718	Jaculus_jaculus
ENSONIG00000017991	UPF2	99	94.322	ENSKMAG00000001071	UPF2	100	94.322	Kryptolebias_marmoratus
ENSONIG00000017991	UPF2	80	92.654	ENSLBEG00000000728	-	94	92.564	Labrus_bergylta
ENSONIG00000017991	UPF2	100	95.383	ENSLBEG00000016394	-	99	95.383	Labrus_bergylta
ENSONIG00000017991	UPF2	99	77.103	ENSLACG00000015945	UPF2	100	77.535	Latimeria_chalumnae
ENSONIG00000017991	UPF2	99	88.504	ENSLOCG00000015698	UPF2	100	88.189	Lepisosteus_oculatus
ENSONIG00000017991	UPF2	100	82.853	ENSMFAG00000043865	UPF2	100	81.138	Macaca_fascicularis
ENSONIG00000017991	UPF2	100	82.853	ENSMMUG00000008241	UPF2	100	81.138	Macaca_mulatta
ENSONIG00000017991	UPF2	80	83.528	ENSMNEG00000008062	UPF2	99	81.189	Macaca_nemestrina
ENSONIG00000017991	UPF2	99	80.811	ENSMLEG00000036120	UPF2	100	79.001	Mandrillus_leucophaeus
ENSONIG00000017991	UPF2	100	96.322	ENSMAMG00000018276	UPF2	100	96.322	Mastacembelus_armatus
ENSONIG00000017991	UPF2	100	99.451	ENSMZEG00005021595	UPF2	100	99.451	Maylandia_zebra
ENSONIG00000017991	UPF2	99	83.947	ENSMGAG00000004573	UPF2	99	82.224	Meleagris_gallopavo
ENSONIG00000017991	UPF2	100	80.328	ENSMAUG00000016512	Upf2	100	78.454	Mesocricetus_auratus
ENSONIG00000017991	UPF2	95	86.735	ENSMICG00000001716	UPF2	99	87.755	Microcebus_murinus
ENSONIG00000017991	UPF2	100	81.406	ENSMOCG00000008263	Upf2	100	80.938	Microtus_ochrogaster
ENSONIG00000017991	UPF2	99	89.263	ENSMMOG00000006528	UPF2	100	89.107	Mola_mola
ENSONIG00000017991	UPF2	100	81.123	ENSMODG00000016794	UPF2	100	81.357	Monodelphis_domestica
ENSONIG00000017991	UPF2	99	94.514	ENSMALG00000002663	UPF2	100	93.809	Monopterus_albus
ENSONIG00000017991	UPF2	100	82.358	MGP_CAROLIEiJ_G0023157	Upf2	99	84.783	Mus_caroli
ENSONIG00000017991	UPF2	100	82.670	ENSMUSG00000043241	Upf2	99	84.151	Mus_musculus
ENSONIG00000017991	UPF2	100	82.748	MGP_PahariEiJ_G0019217	Upf2	100	84.151	Mus_pahari
ENSONIG00000017991	UPF2	100	82.904	MGP_SPRETEiJ_G0024075	Upf2	100	84.151	Mus_spretus
ENSONIG00000017991	UPF2	100	83.073	ENSMPUG00000001064	UPF2	100	81.435	Mustela_putorius_furo
ENSONIG00000017991	UPF2	99	82.449	ENSMLUG00000000228	UPF2	100	80.685	Myotis_lucifugus
ENSONIG00000017991	UPF2	100	99.608	ENSNBRG00000013629	UPF2	100	99.608	Neolamprologus_brichardi
ENSONIG00000017991	UPF2	100	82.697	ENSNLEG00000012058	UPF2	100	80.982	Nomascus_leucogenys
ENSONIG00000017991	UPF2	72	93.662	ENSOPRG00000006801	-	73	93.662	Ochotona_princeps
ENSONIG00000017991	UPF2	100	81.811	ENSODEG00000001290	UPF2	100	80.952	Octodon_degus
ENSONIG00000017991	UPF2	99	81.790	ENSOCUG00000006230	UPF2	100	80.934	Oryctolagus_cuniculus
ENSONIG00000017991	UPF2	100	92.260	ENSORLG00000017189	UPF2	100	92.416	Oryzias_latipes
ENSONIG00000017991	UPF2	100	92.338	ENSORLG00020005969	UPF2	100	92.494	Oryzias_latipes_hni
ENSONIG00000017991	UPF2	100	92.338	ENSORLG00015005713	UPF2	100	92.494	Oryzias_latipes_hsok
ENSONIG00000017991	UPF2	100	89.132	ENSOMEG00000023420	UPF2	98	89.185	Oryzias_melastigma
ENSONIG00000017991	UPF2	100	83.307	ENSOGAG00000005796	UPF2	100	81.045	Otolemur_garnettii
ENSONIG00000017991	UPF2	100	83.178	ENSOARG00000014587	UPF2	100	81.308	Ovis_aries
ENSONIG00000017991	UPF2	99	80.187	ENSPPAG00000037953	UPF2	100	78.376	Pan_paniscus
ENSONIG00000017991	UPF2	100	83.073	ENSPPRG00000000690	UPF2	100	81.279	Panthera_pardus
ENSONIG00000017991	UPF2	100	83.073	ENSPTIG00000008867	UPF2	100	81.279	Panthera_tigris_altaica
ENSONIG00000017991	UPF2	100	82.697	ENSPTRG00000002291	UPF2	100	80.982	Pan_troglodytes
ENSONIG00000017991	UPF2	100	82.853	ENSPANG00000023399	UPF2	100	81.138	Papio_anubis
ENSONIG00000017991	UPF2	100	88.212	ENSPKIG00000025502	UPF2	100	86.651	Paramormyrops_kingsleyae
ENSONIG00000017991	UPF2	59	81.447	ENSPSIG00000015158	UPF2	95	81.316	Pelodiscus_sinensis
ENSONIG00000017991	UPF2	99	90.047	ENSPMGG00000005259	UPF2	100	90.047	Periophthalmus_magnuspinnatus
ENSONIG00000017991	UPF2	93	76.657	ENSPEMG00000015731	Upf2	99	70.238	Peromyscus_maniculatus_bairdii
ENSONIG00000017991	UPF2	100	83.463	ENSPCIG00000006656	UPF2	100	81.591	Phascolarctos_cinereus
ENSONIG00000017991	UPF2	100	93.505	ENSPFOG00000017118	UPF2	100	93.114	Poecilia_formosa
ENSONIG00000017991	UPF2	100	93.505	ENSPLAG00000005094	UPF2	100	93.114	Poecilia_latipinna
ENSONIG00000017991	UPF2	100	93.427	ENSPMEG00000017009	UPF2	100	93.036	Poecilia_mexicana
ENSONIG00000017991	UPF2	99	91.771	ENSPREG00000021880	UPF2	100	91.771	Poecilia_reticulata
ENSONIG00000017991	UPF2	66	85.053	ENSPPYG00000002089	-	100	85.291	Pongo_abelii
ENSONIG00000017991	UPF2	100	71.061	ENSPCAG00000000684	UPF2	100	70.983	Procavia_capensis
ENSONIG00000017991	UPF2	99	80.312	ENSPCOG00000021656	UPF2	100	78.672	Propithecus_coquereli
ENSONIG00000017991	UPF2	100	76.617	ENSPVAG00000017286	UPF2	100	74.747	Pteropus_vampyrus
ENSONIG00000017991	UPF2	99	97.015	ENSPNYG00000017096	UPF2	100	97.015	Pundamilia_nyererei
ENSONIG00000017991	UPF2	100	89.322	ENSPNAG00000009357	UPF2	100	89.556	Pygocentrus_nattereri
ENSONIG00000017991	UPF2	99	78.878	ENSRNOG00000023593	Upf2	100	94.444	Rattus_norvegicus
ENSONIG00000017991	UPF2	99	81.641	ENSRBIG00000037780	UPF2	100	80.141	Rhinopithecus_bieti
ENSONIG00000017991	UPF2	100	82.619	ENSRROG00000043547	UPF2	100	80.826	Rhinopithecus_roxellana
ENSONIG00000017991	UPF2	100	82.215	ENSSBOG00000020012	UPF2	100	80.811	Saimiri_boliviensis_boliviensis
ENSONIG00000017991	UPF2	100	86.963	ENSSFOG00015023788	upf2	100	86.963	Scleropages_formosus
ENSONIG00000017991	UPF2	90	91.941	ENSSMAG00000007637	UPF2	100	91.537	Scophthalmus_maximus
ENSONIG00000017991	UPF2	100	95.618	ENSSDUG00000017244	UPF2	99	95.618	Seriola_dumerili
ENSONIG00000017991	UPF2	99	92.633	ENSSLDG00000016866	UPF2	100	92.241	Seriola_lalandi_dorsalis
ENSONIG00000017991	UPF2	100	81.839	ENSSARG00000008615	UPF2	100	80.203	Sorex_araneus
ENSONIG00000017991	UPF2	99	81.216	ENSSPUG00000014544	UPF2	99	81.060	Sphenodon_punctatus
ENSONIG00000017991	UPF2	68	84.914	ENSSSCG00000011117	-	99	85.143	Sus_scrofa
ENSONIG00000017991	UPF2	99	83.047	ENSTGUG00000002163	-	100	81.406	Taeniopygia_guttata
ENSONIG00000017991	UPF2	100	93.662	ENSTRUG00000007519	UPF2	99	93.662	Takifugu_rubripes
ENSONIG00000017991	UPF2	100	89.922	ENSTNIG00000004453	UPF2	100	89.453	Tetraodon_nigroviridis
ENSONIG00000017991	UPF2	93	75.336	ENSTBEG00000012679	UPF2	93	73.574	Tupaia_belangeri
ENSONIG00000017991	UPF2	100	81.967	ENSTTRG00000016388	UPF2	100	81.343	Tursiops_truncatus
ENSONIG00000017991	UPF2	87	94.382	ENSUAMG00000023560	UPF2	98	94.382	Ursus_americanus
ENSONIG00000017991	UPF2	100	83.307	ENSUMAG00000012953	UPF2	95	81.513	Ursus_maritimus
ENSONIG00000017991	UPF2	83	96.774	ENSVPAG00000006763	UPF2	85	96.774	Vicugna_pacos
ENSONIG00000017991	UPF2	100	83.229	ENSVVUG00000006166	UPF2	100	81.435	Vulpes_vulpes
ENSONIG00000017991	UPF2	100	79.567	ENSXETG00000033103	UPF2	91	84.609	Xenopus_tropicalis
ENSONIG00000017991	UPF2	99	93.260	ENSXCOG00000011604	UPF2	100	92.868	Xiphophorus_couchianus
ENSONIG00000017991	UPF2	100	93.427	ENSXMAG00000017209	UPF2	100	93.036	Xiphophorus_maculatus