EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSONIG00000018040 (Gene tree)
Gene ID: 100711303
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Plus strand
Length: 15343 bases
Position: chrGL831193.1:632783-648125
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000022734	ResIII	PF04851.15	1.4e-08	1	1
ENSONIP00000022734	BRK	PF07533.16	4.9e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000022754	-	5224	-	ENSONIP00000022734	1656 (aa)	-	I3KNN9

Gene Model

Click here to download ENSONIG00000018040's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000018040's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSONIG00000018040	-	99	84.163	ENSONIG00000008196	smarca4a	100	85.457
ENSONIG00000018040	-	99	70.606	ENSONIG00000014163	SMARCA2	95	70.925

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000018040	-	100	83.204	ENSG00000127616	SMARCA4	99	95.652	Homo_sapiens
ENSONIG00000018040	-	74	88.141	ENSAPOG00000003509	smarca4a	98	87.420	Acanthochromis_polyacanthus
ENSONIG00000018040	-	97	96.424	ENSAPOG00000004542	SMARCA4	99	96.424	Acanthochromis_polyacanthus
ENSONIG00000018040	-	100	79.954	ENSAMEG00000010868	SMARCA4	100	80.265	Ailuropoda_melanoleuca
ENSONIG00000018040	-	99	82.695	ENSACIG00000021550	smarca4a	98	85.967	Amphilophus_citrinellus
ENSONIG00000018040	-	95	90.794	ENSACIG00000003035	-	99	91.786	Amphilophus_citrinellus
ENSONIG00000018040	-	70	92.128	ENSAOCG00000019167	smarca4a	100	83.043	Amphiprion_ocellaris
ENSONIG00000018040	-	94	92.061	ENSAOCG00000009450	-	97	93.790	Amphiprion_ocellaris
ENSONIG00000018040	-	100	96.426	ENSAPEG00000023108	-	99	96.426	Amphiprion_percula
ENSONIG00000018040	-	70	92.215	ENSAPEG00000015559	smarca4a	100	83.110	Amphiprion_percula
ENSONIG00000018040	-	99	96.058	ENSATEG00000001094	-	98	96.058	Anabas_testudineus
ENSONIG00000018040	-	99	85.169	ENSATEG00000011524	smarca4a	100	85.577	Anabas_testudineus
ENSONIG00000018040	-	99	83.192	ENSANAG00000036991	SMARCA4	100	81.023	Aotus_nancymaae
ENSONIG00000018040	-	97	99.007	ENSACLG00000008638	-	99	99.007	Astatotilapia_calliptera
ENSONIG00000018040	-	99	84.063	ENSACLG00000000163	smarca4a	96	85.976	Astatotilapia_calliptera
ENSONIG00000018040	-	98	81.392	ENSAMXG00000021023	smarca4a	99	82.338	Astyanax_mexicanus
ENSONIG00000018040	-	94	87.340	ENSAMXG00000011238	-	98	87.612	Astyanax_mexicanus
ENSONIG00000018040	-	100	83.573	ENSBTAG00000019220	SMARCA4	100	84.144	Bos_taurus
ENSONIG00000018040	-	97	86.756	ENSCJAG00000005936	SMARCA4	100	80.461	Callithrix_jacchus
ENSONIG00000018040	-	100	83.323	ENSCAFG00000017584	SMARCA4	100	84.132	Canis_familiaris
ENSONIG00000018040	-	100	83.323	ENSCAFG00020024620	SMARCA4	99	84.132	Canis_lupus_dingo
ENSONIG00000018040	-	100	80.000	ENSCHIG00000015318	SMARCA4	100	80.684	Capra_hircus
ENSONIG00000018040	-	100	83.513	ENSTSYG00000012966	SMARCA4	100	84.264	Carlito_syrichta
ENSONIG00000018040	-	94	77.799	ENSCAPG00000015932	SMARCA4	94	89.775	Cavia_aperea
ENSONIG00000018040	-	100	83.503	ENSCPOG00000015549	SMARCA4	100	84.192	Cavia_porcellus
ENSONIG00000018040	-	100	80.190	ENSCCAG00000031660	SMARCA4	99	81.287	Cebus_capucinus
ENSONIG00000018040	-	100	83.204	ENSCATG00000029530	SMARCA4	100	84.012	Cercocebus_atys
ENSONIG00000018040	-	100	83.633	ENSCLAG00000011946	SMARCA4	100	84.384	Chinchilla_lanigera
ENSONIG00000018040	-	100	83.643	ENSCPBG00000009994	SMARCA4	100	84.122	Chrysemys_picta_bellii
ENSONIG00000018040	-	100	83.144	ENSCANG00000036013	SMARCA4	100	84.012	Colobus_angolensis_palliatus
ENSONIG00000018040	-	100	83.144	ENSCGRG00001016732	Smarca4	100	83.892	Cricetulus_griseus_chok1gshd
ENSONIG00000018040	-	100	83.144	ENSCGRG00000017242	Smarca4	100	83.892	Cricetulus_griseus_crigri
ENSONIG00000018040	-	96	81.852	ENSCSEG00000014771	smarca4a	100	84.639	Cynoglossus_semilaevis
ENSONIG00000018040	-	99	89.268	ENSCVAG00000003018	-	99	90.727	Cyprinodon_variegatus
ENSONIG00000018040	-	99	83.394	ENSCVAG00000006979	smarca4a	99	84.681	Cyprinodon_variegatus
ENSONIG00000018040	-	92	83.898	ENSDARG00000104339	SMARCA4	94	84.850	Danio_rerio
ENSONIG00000018040	-	98	87.160	ENSDARG00000077226	smarca4a	100	86.153	Danio_rerio
ENSONIG00000018040	-	96	83.227	ENSDNOG00000048847	SMARCA4	90	90.574	Dasypus_novemcinctus
ENSONIG00000018040	-	86	79.175	ENSDORG00000002544	Smarca4	91	79.787	Dipodomys_ordii
ENSONIG00000018040	-	94	73.062	ENSETEG00000013361	SMARCA4	94	73.075	Echinops_telfairi
ENSONIG00000018040	-	96	87.481	ENSEASG00005006167	SMARCA4	100	82.170	Equus_asinus_asinus
ENSONIG00000018040	-	100	83.323	ENSECAG00000008334	SMARCA4	100	83.952	Equus_caballus
ENSONIG00000018040	-	100	83.075	ENSELUG00000010247	smarca4a	100	82.598	Esox_lucius
ENSONIG00000018040	-	96	82.341	ENSELUG00000023232	-	98	85.654	Esox_lucius
ENSONIG00000018040	-	100	83.294	ENSFCAG00000004894	SMARCA4	100	84.041	Felis_catus
ENSONIG00000018040	-	92	80.825	ENSFALG00000004208	SMARCA4	95	81.709	Ficedula_albicollis
ENSONIG00000018040	-	92	83.995	ENSFDAG00000012237	SMARCA4	97	84.615	Fukomys_damarensis
ENSONIG00000018040	-	100	95.324	ENSFHEG00000007902	-	99	95.144	Fundulus_heteroclitus
ENSONIG00000018040	-	95	80.932	ENSFHEG00000010182	smarca4a	100	84.038	Fundulus_heteroclitus
ENSONIG00000018040	-	87	80.122	ENSGMOG00000002649	smarca4a	93	81.250	Gadus_morhua
ENSONIG00000018040	-	93	84.635	ENSGMOG00000005756	-	93	83.849	Gadus_morhua
ENSONIG00000018040	-	74	81.700	ENSGALG00000047145	SMARCA4	100	82.549	Gallus_gallus
ENSONIG00000018040	-	99	87.126	ENSGAFG00000008827	-	98	86.447	Gambusia_affinis
ENSONIG00000018040	-	87	88.008	ENSGAFG00000014900	smarca4a	97	88.130	Gambusia_affinis
ENSONIG00000018040	-	95	80.947	ENSGACG00000006691	smarca4a	100	83.753	Gasterosteus_aculeatus
ENSONIG00000018040	-	100	86.300	ENSGACG00000016033	-	100	85.480	Gasterosteus_aculeatus
ENSONIG00000018040	-	100	83.854	ENSGAGG00000016757	SMARCA4	100	84.334	Gopherus_agassizii
ENSONIG00000018040	-	100	83.204	ENSGGOG00000009882	SMARCA4	100	84.012	Gorilla_gorilla
ENSONIG00000018040	-	100	99.698	ENSHBUG00000005447	-	99	99.698	Haplochromis_burtoni
ENSONIG00000018040	-	99	84.470	ENSHBUG00000021172	smarca4a	100	85.577	Haplochromis_burtoni
ENSONIG00000018040	-	100	83.274	ENSHGLG00000010519	SMARCA4	100	83.781	Heterocephalus_glaber_female
ENSONIG00000018040	-	100	83.522	ENSHGLG00100013774	SMARCA4	100	83.852	Heterocephalus_glaber_male
ENSONIG00000018040	-	95	84.596	ENSHCOG00000009510	smarca4a	96	85.705	Hippocampus_comes
ENSONIG00000018040	-	99	85.653	ENSIPUG00000006107	smarca4a	100	85.602	Ictalurus_punctatus
ENSONIG00000018040	-	98	85.224	ENSIPUG00000016346	-	89	90.934	Ictalurus_punctatus
ENSONIG00000018040	-	100	83.264	ENSSTOG00000007939	SMARCA4	100	84.012	Ictidomys_tridecemlineatus
ENSONIG00000018040	-	100	81.536	ENSJJAG00000012877	Smarca4	100	81.973	Jaculus_jaculus
ENSONIG00000018040	-	100	94.967	ENSKMAG00000019518	-	99	94.428	Kryptolebias_marmoratus
ENSONIG00000018040	-	99	83.455	ENSKMAG00000011931	smarca4a	100	84.787	Kryptolebias_marmoratus
ENSONIG00000018040	-	95	82.438	ENSLBEG00000017383	smarca4a	97	81.916	Labrus_bergylta
ENSONIG00000018040	-	99	76.222	ENSLBEG00000020655	-	98	77.628	Labrus_bergylta
ENSONIG00000018040	-	53	77.123	ENSLACG00000015309	SMARCA4	100	77.237	Latimeria_chalumnae
ENSONIG00000018040	-	99	81.239	ENSLOCG00000007820	smarca4a	99	81.310	Lepisosteus_oculatus
ENSONIG00000018040	-	100	83.234	ENSLAFG00000001433	SMARCA4	100	83.981	Loxodonta_africana
ENSONIG00000018040	-	100	83.204	ENSMFAG00000032146	SMARCA4	99	84.012	Macaca_fascicularis
ENSONIG00000018040	-	100	83.204	ENSMMUG00000012042	SMARCA4	99	89.965	Macaca_mulatta
ENSONIG00000018040	-	100	83.543	ENSMNEG00000028512	SMARCA4	100	84.113	Macaca_nemestrina
ENSONIG00000018040	-	100	83.204	ENSMLEG00000034976	SMARCA4	100	83.802	Mandrillus_leucophaeus
ENSONIG00000018040	-	96	87.788	ENSMAMG00000009256	smarca4a	98	90.268	Mastacembelus_armatus
ENSONIG00000018040	-	100	96.168	ENSMAMG00000002841	-	99	96.168	Mastacembelus_armatus
ENSONIG00000018040	-	97	99.688	ENSMZEG00005023861	-	99	99.688	Maylandia_zebra
ENSONIG00000018040	-	99	84.358	ENSMZEG00005003889	smarca4a	100	85.405	Maylandia_zebra
ENSONIG00000018040	-	100	83.115	ENSMAUG00000020731	Smarca4	100	83.861	Mesocricetus_auratus
ENSONIG00000018040	-	100	83.234	ENSMICG00000009806	SMARCA4	100	83.981	Microcebus_murinus
ENSONIG00000018040	-	100	82.936	ENSMOCG00000022209	Smarca4	100	83.682	Microtus_ochrogaster
ENSONIG00000018040	-	99	87.158	ENSMMOG00000008466	-	98	85.688	Mola_mola
ENSONIG00000018040	-	95	81.056	ENSMMOG00000007571	smarca4a	98	84.484	Mola_mola
ENSONIG00000018040	-	100	82.235	ENSMODG00000006287	SMARCA4	100	82.176	Monodelphis_domestica
ENSONIG00000018040	-	90	88.635	ENSMALG00000021534	-	99	88.500	Monopterus_albus
ENSONIG00000018040	-	95	84.005	ENSMALG00000003388	smarca4a	100	85.328	Monopterus_albus
ENSONIG00000018040	-	100	83.025	MGP_CAROLIEiJ_G0031879	Smarca4	100	85.827	Mus_caroli
ENSONIG00000018040	-	100	83.025	ENSMUSG00000032187	Smarca4	99	85.827	Mus_musculus
ENSONIG00000018040	-	100	83.213	MGP_PahariEiJ_G0014745	Smarca4	100	85.850	Mus_pahari
ENSONIG00000018040	-	100	83.025	MGP_SPRETEiJ_G0033003	Smarca4	100	85.827	Mus_spretus
ENSONIG00000018040	-	100	83.323	ENSMPUG00000005711	SMARCA4	100	84.072	Mustela_putorius_furo
ENSONIG00000018040	-	100	83.323	ENSMLUG00000004491	-	100	84.132	Myotis_lucifugus
ENSONIG00000018040	-	100	83.613	ENSNGAG00000021852	Smarca4	100	83.794	Nannospalax_galili
ENSONIG00000018040	-	95	82.700	ENSNBRG00000011457	smarca4a	96	83.481	Neolamprologus_brichardi
ENSONIG00000018040	-	90	92.520	ENSNBRG00000018865	-	99	93.329	Neolamprologus_brichardi
ENSONIG00000018040	-	95	80.590	ENSNLEG00000012389	SMARCA4	94	81.222	Nomascus_leucogenys
ENSONIG00000018040	-	77	89.655	ENSOPRG00000000885	-	77	89.655	Ochotona_princeps
ENSONIG00000018040	-	100	82.283	ENSODEG00000017127	SMARCA4	100	81.824	Octodon_degus
ENSONIG00000018040	-	98	78.567	ENSOCUG00000001787	SMARCA4	98	78.528	Oryctolagus_cuniculus
ENSONIG00000018040	-	97	95.143	ENSORLG00000003955	-	99	94.883	Oryzias_latipes
ENSONIG00000018040	-	97	82.980	ENSORLG00000015452	smarca4a	100	84.565	Oryzias_latipes
ENSONIG00000018040	-	97	82.855	ENSORLG00020004611	smarca4a	100	84.565	Oryzias_latipes_hni
ENSONIG00000018040	-	97	95.146	ENSORLG00020009728	-	99	94.886	Oryzias_latipes_hni
ENSONIG00000018040	-	97	83.666	ENSORLG00015016560	smarca4a	100	84.444	Oryzias_latipes_hsok
ENSONIG00000018040	-	100	94.461	ENSORLG00015007739	-	99	94.642	Oryzias_latipes_hsok
ENSONIG00000018040	-	100	84.398	ENSOMEG00000007486	smarca4a	100	84.838	Oryzias_melastigma
ENSONIG00000018040	-	97	95.265	ENSOMEG00000016626	-	99	95.120	Oryzias_melastigma
ENSONIG00000018040	-	90	81.903	ENSOGAG00000016148	SMARCA4	100	82.467	Otolemur_garnettii
ENSONIG00000018040	-	100	82.914	ENSOARG00000017454	SMARCA4	100	83.544	Ovis_aries
ENSONIG00000018040	-	100	83.204	ENSPPAG00000043191	SMARCA4	100	84.012	Pan_paniscus
ENSONIG00000018040	-	100	83.294	ENSPPRG00000000064	SMARCA4	100	84.041	Panthera_pardus
ENSONIG00000018040	-	93	85.392	ENSPTIG00000017447	SMARCA4	100	78.057	Panthera_tigris_altaica
ENSONIG00000018040	-	100	83.204	ENSPTRG00000010488	SMARCA4	100	84.012	Pan_troglodytes
ENSONIG00000018040	-	100	83.603	ENSPANG00000011042	SMARCA4	99	84.173	Papio_anubis
ENSONIG00000018040	-	95	86.176	ENSPKIG00000010087	-	97	85.741	Paramormyrops_kingsleyae
ENSONIG00000018040	-	99	87.142	ENSPKIG00000007770	SMARCA4	99	86.755	Paramormyrops_kingsleyae
ENSONIG00000018040	-	100	77.525	ENSPSIG00000005547	SMARCA4	100	78.404	Pelodiscus_sinensis
ENSONIG00000018040	-	100	82.936	ENSPEMG00000020389	Smarca4	100	83.682	Peromyscus_maniculatus_bairdii
ENSONIG00000018040	-	100	83.753	ENSPCIG00000017138	SMARCA4	100	84.233	Phascolarctos_cinereus
ENSONIG00000018040	-	100	82.936	ENSPFOG00000007892	smarca4a	100	83.353	Poecilia_formosa
ENSONIG00000018040	-	100	94.308	ENSPFOG00000012930	-	99	94.727	Poecilia_formosa
ENSONIG00000018040	-	80	97.961	ENSPLAG00000018616	-	98	92.678	Poecilia_latipinna
ENSONIG00000018040	-	100	83.115	ENSPLAG00000014294	smarca4a	100	83.532	Poecilia_latipinna
ENSONIG00000018040	-	95	94.680	ENSPMEG00000008929	-	96	94.870	Poecilia_mexicana
ENSONIG00000018040	-	95	83.887	ENSPMEG00000003725	smarca4a	96	84.118	Poecilia_mexicana
ENSONIG00000018040	-	95	94.641	ENSPREG00000014823	-	96	94.704	Poecilia_reticulata
ENSONIG00000018040	-	99	81.109	ENSPREG00000014608	smarca4a	100	83.323	Poecilia_reticulata
ENSONIG00000018040	-	100	81.770	ENSPPYG00000009568	SMARCA4	100	81.914	Pongo_abelii
ENSONIG00000018040	-	80	82.781	ENSPCAG00000014054	SMARCA4	77	82.781	Procavia_capensis
ENSONIG00000018040	-	100	83.264	ENSPCOG00000023011	SMARCA4	100	83.861	Propithecus_coquereli
ENSONIG00000018040	-	96	74.092	ENSPVAG00000007787	SMARCA4	96	74.786	Pteropus_vampyrus
ENSONIG00000018040	-	99	81.962	ENSPNYG00000000717	smarca4a	96	86.094	Pundamilia_nyererei
ENSONIG00000018040	-	95	91.302	ENSPNYG00000023995	-	99	92.192	Pundamilia_nyererei
ENSONIG00000018040	-	93	90.487	ENSPNAG00000024136	smarca4a	98	81.463	Pygocentrus_nattereri
ENSONIG00000018040	-	95	87.863	ENSPNAG00000006636	-	97	87.437	Pygocentrus_nattereri
ENSONIG00000018040	-	100	83.025	ENSRNOG00000009271	Smarca4	100	83.772	Rattus_norvegicus
ENSONIG00000018040	-	100	83.084	ENSRBIG00000038696	SMARCA4	99	83.892	Rhinopithecus_bieti
ENSONIG00000018040	-	100	83.144	ENSRROG00000045509	SMARCA4	100	83.952	Rhinopithecus_roxellana
ENSONIG00000018040	-	99	83.354	ENSSBOG00000026896	SMARCA4	99	84.233	Saimiri_boliviensis_boliviensis
ENSONIG00000018040	-	100	83.633	ENSSHAG00000001642	SMARCA4	100	84.113	Sarcophilus_harrisii
ENSONIG00000018040	-	99	86.792	ENSSFOG00015013823	smarca4	99	85.869	Scleropages_formosus
ENSONIG00000018040	-	95	82.286	ENSSFOG00015009921	-	89	90.991	Scleropages_formosus
ENSONIG00000018040	-	100	92.146	ENSSMAG00000014082	-	99	93.174	Scophthalmus_maximus
ENSONIG00000018040	-	99	83.947	ENSSMAG00000003200	smarca4a	100	83.969	Scophthalmus_maximus
ENSONIG00000018040	-	99	80.376	ENSSDUG00000017298	smarca4a	100	79.333	Seriola_dumerili
ENSONIG00000018040	-	99	95.726	ENSSDUG00000005388	-	100	96.665	Seriola_dumerili
ENSONIG00000018040	-	99	82.217	ENSSLDG00000024486	smarca4a	100	85.092	Seriola_lalandi_dorsalis
ENSONIG00000018040	-	95	92.957	ENSSLDG00000023663	-	99	94.635	Seriola_lalandi_dorsalis
ENSONIG00000018040	-	61	97.516	ENSSARG00000013477	SMARCA4	82	97.516	Sorex_araneus
ENSONIG00000018040	-	95	80.589	ENSSPUG00000004558	SMARCA4	98	81.305	Sphenodon_punctatus
ENSONIG00000018040	-	100	96.371	ENSSPAG00000012533	-	99	96.371	Stegastes_partitus
ENSONIG00000018040	-	99	81.929	ENSSPAG00000004248	smarca4a	100	84.675	Stegastes_partitus
ENSONIG00000018040	-	100	83.353	ENSSSCG00000013629	SMARCA4	100	84.041	Sus_scrofa
ENSONIG00000018040	-	51	84.534	ENSTGUG00000015488	-	98	84.423	Taeniopygia_guttata
ENSONIG00000018040	-	97	92.634	ENSTRUG00000001378	SMARCA4	99	92.634	Takifugu_rubripes
ENSONIG00000018040	-	90	79.866	ENSTRUG00000004885	smarca4a	100	80.067	Takifugu_rubripes
ENSONIG00000018040	-	100	90.565	ENSTNIG00000004536	SMARCA4	100	90.445	Tetraodon_nigroviridis
ENSONIG00000018040	-	70	84.323	ENSTNIG00000004859	-	96	87.024	Tetraodon_nigroviridis
ENSONIG00000018040	-	50	98.649	ENSTBEG00000000707	-	52	98.571	Tupaia_belangeri
ENSONIG00000018040	-	100	80.869	ENSTTRG00000009519	SMARCA4	100	80.776	Tursiops_truncatus
ENSONIG00000018040	-	100	83.383	ENSUAMG00000014661	SMARCA4	100	84.132	Ursus_americanus
ENSONIG00000018040	-	94	89.457	ENSUMAG00000022005	SMARCA4	98	90.502	Ursus_maritimus
ENSONIG00000018040	-	100	83.323	ENSVVUG00000017820	SMARCA4	97	84.132	Vulpes_vulpes
ENSONIG00000018040	-	99	78.367	ENSXETG00000009355	smarca4	90	83.571	Xenopus_tropicalis
ENSONIG00000018040	-	99	87.790	ENSXCOG00000013494	-	98	87.485	Xiphophorus_couchianus
ENSONIG00000018040	-	100	82.895	ENSXMAG00000006321	smarca4a	100	83.792	Xiphophorus_maculatus
ENSONIG00000018040	-	100	95.120	ENSXMAG00000007030	-	99	95.361	Xiphophorus_maculatus