EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSONIG00000018350 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: heterogeneous nuclear ribonucleoprotein C
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Minus strand
Length: 11854 bases
Position: chrGL831198.1:86906-98759
Accession: 109194311
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000023106	RRM_1	PF00076.22	1.9e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000023126	-	1944	XM_005476705	ENSONIP00000023106	319 (aa)	XP_005476762	I3KPR1

Gene Model

Click here to download ENSONIG00000018350's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000018350's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSONIG00000018350	-	79	83.529	ENSONIG00000007859	-	93	81.319
ENSONIG00000018350	-	93	40.895	ENSONIG00000004416	raly	73	52.511
ENSONIG00000018350	-	69	55.417	ENSONIG00000006372	-	78	54.622
ENSONIG00000018350	-	68	54.321	ENSONIG00000018638	-	82	51.394

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000018350	-	69	56.757	ENSG00000184672	RALYL	92	79.487	Homo_sapiens
ENSONIG00000018350	-	79	85.490	ENSAPOG00000006963	hnrnpc	85	80.075	Acanthochromis_polyacanthus
ENSONIG00000018350	-	97	97.087	ENSACIG00000016568	-	100	97.087	Amphilophus_citrinellus
ENSONIG00000018350	-	81	82.375	ENSACIG00000000270	-	99	75.241	Amphilophus_citrinellus
ENSONIG00000018350	-	79	85.882	ENSAOCG00000003896	-	85	80.451	Amphiprion_ocellaris
ENSONIG00000018350	-	100	90.123	ENSAOCG00000021616	-	100	89.815	Amphiprion_ocellaris
ENSONIG00000018350	-	79	85.882	ENSAPEG00000001489	-	85	80.451	Amphiprion_percula
ENSONIG00000018350	-	84	92.884	ENSAPEG00000019962	-	85	92.509	Amphiprion_percula
ENSONIG00000018350	-	84	92.565	ENSATEG00000018006	-	100	88.344	Anabas_testudineus
ENSONIG00000018350	-	81	82.308	ENSATEG00000011734	-	99	75.806	Anabas_testudineus
ENSONIG00000018350	-	69	53.448	ENSAPLG00000015574	RALYL	80	54.043	Anas_platyrhynchos
ENSONIG00000018350	-	70	54.430	ENSACAG00000028464	RALYL	79	54.468	Anolis_carolinensis
ENSONIG00000018350	-	69	56.757	ENSANAG00000023383	RALYL	78	55.752	Aotus_nancymaae
ENSONIG00000018350	-	90	98.606	ENSACLG00000005707	-	96	98.606	Astatotilapia_calliptera
ENSONIG00000018350	-	79	82.353	ENSACLG00000000995	-	82	83.929	Astatotilapia_calliptera
ENSONIG00000018350	-	79	81.961	ENSACLG00000013636	-	87	79.323	Astatotilapia_calliptera
ENSONIG00000018350	-	83	78.571	ENSAMXG00000034915	zgc:55733	91	75.564	Astyanax_mexicanus
ENSONIG00000018350	-	66	77.358	ENSAMXG00000042946	hnrnpc	97	75.130	Astyanax_mexicanus
ENSONIG00000018350	-	69	56.757	ENSCJAG00000000402	RALYL	78	55.752	Callithrix_jacchus
ENSONIG00000018350	-	69	54.978	ENSCPOG00000012314	RALYL	79	54.274	Cavia_porcellus
ENSONIG00000018350	-	69	56.757	ENSCCAG00000025003	RALYL	76	79.487	Cebus_capucinus
ENSONIG00000018350	-	69	56.757	ENSCATG00000042145	RALYL	78	55.752	Cercocebus_atys
ENSONIG00000018350	-	69	54.978	ENSCLAG00000005228	RALYL	79	54.274	Chinchilla_lanigera
ENSONIG00000018350	-	66	55.556	ENSCHOG00000013228	RALYL	75	52.174	Choloepus_hoffmanni
ENSONIG00000018350	-	69	56.757	ENSCANG00000039144	RALYL	78	55.752	Colobus_angolensis_palliatus
ENSONIG00000018350	-	69	54.741	ENSCGRG00001009241	Ralyl	79	53.617	Cricetulus_griseus_chok1gshd
ENSONIG00000018350	-	79	87.352	ENSCSEG00000021349	-	82	84.270	Cynoglossus_semilaevis
ENSONIG00000018350	-	70	75.771	ENSCSEG00000019769	-	74	74.324	Cynoglossus_semilaevis
ENSONIG00000018350	-	86	65.108	ENSCVAG00000002797	-	86	64.865	Cyprinodon_variegatus
ENSONIG00000018350	-	100	84.098	ENSCVAG00000016981	-	100	84.404	Cyprinodon_variegatus
ENSONIG00000018350	-	83	80.451	ENSDARG00000103845	zgc:55733	93	76.046	Danio_rerio
ENSONIG00000018350	-	78	80.645	ENSDARG00000053810	hnrnpc	99	73.438	Danio_rerio
ENSONIG00000018350	-	69	55.603	ENSDORG00000003721	Ralyl	79	54.468	Dipodomys_ordii
ENSONIG00000018350	-	51	57.803	ENSETEG00000014028	RALYL	82	60.870	Echinops_telfairi
ENSONIG00000018350	-	69	46.957	ENSEBUG00000012363	hnrnpc	67	46.087	Eptatretus_burgeri
ENSONIG00000018350	-	66	49.537	ENSEBUG00000006049	RALYL	74	47.196	Eptatretus_burgeri
ENSONIG00000018350	-	70	54.852	ENSEEUG00000007202	RALYL	80	54.701	Erinaceus_europaeus
ENSONIG00000018350	-	80	80.443	ENSELUG00000007714	-	93	76.895	Esox_lucius
ENSONIG00000018350	-	96	78.526	ENSELUG00000004132	-	99	77.244	Esox_lucius
ENSONIG00000018350	-	66	58.525	ENSFALG00000008647	RALYL	96	57.407	Ficedula_albicollis
ENSONIG00000018350	-	97	81.212	ENSFHEG00000007278	-	100	81.212	Fundulus_heteroclitus
ENSONIG00000018350	-	87	76.596	ENSFHEG00000003605	-	88	74.539	Fundulus_heteroclitus
ENSONIG00000018350	-	69	57.589	ENSGALG00000036938	RALYL	78	54.043	Gallus_gallus
ENSONIG00000018350	-	87	75.887	ENSGAFG00000020486	-	99	68.536	Gambusia_affinis
ENSONIG00000018350	-	97	85.032	ENSGAFG00000020992	-	100	87.261	Gambusia_affinis
ENSONIG00000018350	-	100	80.000	ENSGACG00000017772	-	97	88.189	Gasterosteus_aculeatus
ENSONIG00000018350	-	70	73.543	ENSGACG00000018932	-	89	68.000	Gasterosteus_aculeatus
ENSONIG00000018350	-	69	56.757	ENSGGOG00000000841	RALYL	78	55.752	Gorilla_gorilla
ENSONIG00000018350	-	100	99.060	ENSHBUG00000010527	-	100	99.060	Haplochromis_burtoni
ENSONIG00000018350	-	96	67.751	ENSHBUG00000018342	-	99	66.272	Haplochromis_burtoni
ENSONIG00000018350	-	69	54.545	ENSHGLG00000004866	RALYL	79	53.846	Heterocephalus_glaber_female
ENSONIG00000018350	-	69	54.545	ENSHGLG00100017480	RALYL	79	53.846	Heterocephalus_glaber_male
ENSONIG00000018350	-	82	86.496	ENSHCOG00000012333	hnrnpc	91	86.022	Hippocampus_comes
ENSONIG00000018350	-	83	80.827	ENSIPUG00000008666	zgc:55733	94	79.724	Ictalurus_punctatus
ENSONIG00000018350	-	83	78.195	ENSIPUG00000011271	hnrnpc	97	80.000	Ictalurus_punctatus
ENSONIG00000018350	-	69	55.172	ENSSTOG00000012583	RALYL	80	54.043	Ictidomys_tridecemlineatus
ENSONIG00000018350	-	100	86.687	ENSKMAG00000018265	-	100	86.068	Kryptolebias_marmoratus
ENSONIG00000018350	-	86	78.777	ENSKMAG00000011170	-	84	79.848	Kryptolebias_marmoratus
ENSONIG00000018350	-	100	85.000	ENSLBEG00000006193	-	100	83.699	Labrus_bergylta
ENSONIG00000018350	-	87	73.103	ENSLBEG00000024418	-	86	72.453	Labrus_bergylta
ENSONIG00000018350	-	86	77.338	ENSLBEG00000006979	-	85	76.892	Labrus_bergylta
ENSONIG00000018350	-	83	70.896	ENSLOCG00000002560	hnrnpc	91	71.481	Lepisosteus_oculatus
ENSONIG00000018350	-	69	56.757	ENSMNEG00000033288	RALYL	78	55.752	Macaca_nemestrina
ENSONIG00000018350	-	69	56.757	ENSMLEG00000038284	RALYL	78	55.752	Mandrillus_leucophaeus
ENSONIG00000018350	-	79	83.922	ENSMAMG00000012236	-	84	81.203	Mastacembelus_armatus
ENSONIG00000018350	-	100	87.926	ENSMAMG00000008033	-	100	88.235	Mastacembelus_armatus
ENSONIG00000018350	-	100	98.746	ENSMZEG00005024249	-	100	98.746	Maylandia_zebra
ENSONIG00000018350	-	79	82.353	ENSMZEG00005020460	-	88	77.567	Maylandia_zebra
ENSONIG00000018350	-	69	54.741	ENSMAUG00000015149	Ralyl	79	53.617	Mesocricetus_auratus
ENSONIG00000018350	-	69	56.054	ENSMICG00000005558	RALYL	79	79.487	Microcebus_murinus
ENSONIG00000018350	-	84	48.958	ENSMOCG00000017371	Ralyl	79	53.617	Microtus_ochrogaster
ENSONIG00000018350	-	90	87.415	ENSMMOG00000019520	-	100	82.313	Mola_mola
ENSONIG00000018350	-	83	82.264	ENSMMOG00000021465	-	92	80.755	Mola_mola
ENSONIG00000018350	-	81	75.097	ENSMALG00000007520	-	85	72.763	Monopterus_albus
ENSONIG00000018350	-	84	88.390	ENSMALG00000014623	-	84	88.764	Monopterus_albus
ENSONIG00000018350	-	69	54.310	ENSMUSG00000039717	Ralyl	92	78.205	Mus_musculus
ENSONIG00000018350	-	69	56.034	ENSMPUG00000010724	RALYL	79	53.617	Mustela_putorius_furo
ENSONIG00000018350	-	69	54.741	ENSNGAG00000013375	Ralyl	79	53.617	Nannospalax_galili
ENSONIG00000018350	-	100	99.375	ENSNBRG00000015676	-	100	99.375	Neolamprologus_brichardi
ENSONIG00000018350	-	81	82.308	ENSNBRG00000004912	-	94	80.349	Neolamprologus_brichardi
ENSONIG00000018350	-	69	56.757	ENSNLEG00000002702	RALYL	74	55.752	Nomascus_leucogenys
ENSONIG00000018350	-	57	51.813	ENSOPRG00000013650	-	98	49.215	Ochotona_princeps
ENSONIG00000018350	-	70	54.237	ENSODEG00000001012	RALYL	79	54.274	Octodon_degus
ENSONIG00000018350	-	79	72.374	ENSORLG00000009999	-	85	69.403	Oryzias_latipes
ENSONIG00000018350	-	100	86.186	ENSORLG00000003144	-	100	86.186	Oryzias_latipes
ENSONIG00000018350	-	79	71.984	ENSORLG00020018228	hnrnpc	85	69.030	Oryzias_latipes_hni
ENSONIG00000018350	-	100	85.970	ENSORLG00015009460	-	100	85.970	Oryzias_latipes_hsok
ENSONIG00000018350	-	79	72.374	ENSORLG00015019755	-	85	69.403	Oryzias_latipes_hsok
ENSONIG00000018350	-	79	73.541	ENSOMEG00000020488	-	85	70.522	Oryzias_melastigma
ENSONIG00000018350	-	100	88.509	ENSOMEG00000022665	-	100	89.130	Oryzias_melastigma
ENSONIG00000018350	-	69	56.757	ENSPPAG00000038705	RALYL	78	55.752	Pan_paniscus
ENSONIG00000018350	-	69	58.667	ENSPPRG00000018612	RALYL	78	55.947	Panthera_pardus
ENSONIG00000018350	-	69	58.667	ENSPTIG00000020331	RALYL	78	55.947	Panthera_tigris_altaica
ENSONIG00000018350	-	69	56.757	ENSPTRG00000020381	RALYL	78	55.752	Pan_troglodytes
ENSONIG00000018350	-	69	56.757	ENSPANG00000029305	RALYL	78	55.752	Papio_anubis
ENSONIG00000018350	-	74	84.874	ENSPKIG00000022837	-	98	79.814	Paramormyrops_kingsleyae
ENSONIG00000018350	-	84	79.562	ENSPKIG00000008592	-	100	73.620	Paramormyrops_kingsleyae
ENSONIG00000018350	-	84	48.621	ENSPSIG00000011135	RALYL	78	54.468	Pelodiscus_sinensis
ENSONIG00000018350	-	70	90.541	ENSPMGG00000013144	-	82	87.215	Periophthalmus_magnuspinnatus
ENSONIG00000018350	-	65	79.327	ENSPMGG00000017774	-	96	62.025	Periophthalmus_magnuspinnatus
ENSONIG00000018350	-	69	54.741	ENSPEMG00000016447	Ralyl	79	53.617	Peromyscus_maniculatus_bairdii
ENSONIG00000018350	-	66	54.867	ENSPMAG00000002407	RALYL	97	52.000	Petromyzon_marinus
ENSONIG00000018350	-	87	76.512	ENSPFOG00000001583	-	99	70.405	Poecilia_formosa
ENSONIG00000018350	-	100	84.568	ENSPFOG00000002643	-	100	86.420	Poecilia_formosa
ENSONIG00000018350	-	87	75.089	ENSPLAG00000015305	-	99	69.159	Poecilia_latipinna
ENSONIG00000018350	-	100	84.615	ENSPLAG00000000061	-	100	84.308	Poecilia_latipinna
ENSONIG00000018350	-	87	78.014	ENSPMEG00000004802	-	98	70.347	Poecilia_mexicana
ENSONIG00000018350	-	100	83.951	ENSPMEG00000016524	-	100	85.802	Poecilia_mexicana
ENSONIG00000018350	-	84	88.764	ENSPREG00000001852	-	89	88.015	Poecilia_reticulata
ENSONIG00000018350	-	79	78.125	ENSPREG00000007928	-	87	74.908	Poecilia_reticulata
ENSONIG00000018350	-	82	49.110	ENSPVAG00000010821	RALYL	78	53.419	Pteropus_vampyrus
ENSONIG00000018350	-	90	98.955	ENSPNYG00000003747	-	96	98.955	Pundamilia_nyererei
ENSONIG00000018350	-	81	82.692	ENSPNYG00000020293	-	87	80.000	Pundamilia_nyererei
ENSONIG00000018350	-	78	80.645	ENSPNAG00000015686	hnrnpc	89	79.401	Pygocentrus_nattereri
ENSONIG00000018350	-	83	74.539	ENSPNAG00000019200	zgc:55733	86	74.539	Pygocentrus_nattereri
ENSONIG00000018350	-	69	56.757	ENSRROG00000023925	RALYL	81	77.500	Rhinopithecus_roxellana
ENSONIG00000018350	-	87	77.431	ENSSFOG00015012924	-	80	100.000	Scleropages_formosus
ENSONIG00000018350	-	84	76.557	ENSSFOG00015012015	-	95	74.462	Scleropages_formosus
ENSONIG00000018350	-	100	85.627	ENSSMAG00000011147	-	100	85.627	Scophthalmus_maximus
ENSONIG00000018350	-	79	78.431	ENSSMAG00000013592	-	99	73.209	Scophthalmus_maximus
ENSONIG00000018350	-	100	87.461	ENSSDUG00000006730	-	100	86.834	Seriola_dumerili
ENSONIG00000018350	-	87	80.427	ENSSDUG00000001723	-	99	75.312	Seriola_dumerili
ENSONIG00000018350	-	84	87.640	ENSSLDG00000007474	-	92	86.891	Seriola_lalandi_dorsalis
ENSONIG00000018350	-	85	81.985	ENSSLDG00000007454	-	87	81.111	Seriola_lalandi_dorsalis
ENSONIG00000018350	-	86	81.227	ENSSPAG00000023204	-	85	81.203	Stegastes_partitus
ENSONIG00000018350	-	100	89.028	ENSSPAG00000013996	-	100	90.312	Stegastes_partitus
ENSONIG00000018350	-	84	47.569	ENSTGUG00000011689	RALYL	78	55.217	Taeniopygia_guttata
ENSONIG00000018350	-	81	80.233	ENSTRUG00000020158	-	99	72.727	Takifugu_rubripes
ENSONIG00000018350	-	81	77.481	ENSTNIG00000007427	-	84	77.099	Tetraodon_nigroviridis
ENSONIG00000018350	-	80	78.431	ENSTNIG00000000334	-	94	76.718	Tetraodon_nigroviridis
ENSONIG00000018350	-	69	48.696	ENSTBEG00000005551	RALYL	92	48.101	Tupaia_belangeri
ENSONIG00000018350	-	70	52.586	ENSTTRG00000015762	RALYL	78	52.838	Tursiops_truncatus
ENSONIG00000018350	-	70	51.754	ENSVPAG00000008501	RALYL	78	51.542	Vicugna_pacos
ENSONIG00000018350	-	87	70.819	ENSXCOG00000006552	-	83	69.084	Xiphophorus_couchianus
ENSONIG00000018350	-	87	76.241	ENSXMAG00000009333	-	99	68.847	Xiphophorus_maculatus
ENSONIG00000018350	-	84	88.764	ENSXMAG00000022849	-	86	88.015	Xiphophorus_maculatus