EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSONIG00000018365 (Gene tree)
Gene ID: 100692468
Gene Symbol: zgc:171482
Alias: -
Full Name: zgc:171482
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Plus strand
Length: 27393 bases
Position: chrGL831242.1:497484-524876
Accession: ZDB-GENE-080204-84
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000023122	zf-met	PF12874.7	2.1e-27	1	4
ENSONIP00000023122	zf-met	PF12874.7	2.1e-27	2	4
ENSONIP00000023122	zf-met	PF12874.7	2.1e-27	3	4
ENSONIP00000023122	zf-met	PF12874.7	2.1e-27	4	4
ENSONIP00000023122	zf-C2H2_jaz	PF12171.8	9.6e-21	1	2
ENSONIP00000023122	zf-C2H2_jaz	PF12171.8	9.6e-21	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000023142	-	705	-	ENSONIP00000023122	231 (aa)	-	I3KPS7

Gene Model

Click here to download ENSONIG00000018365's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000018365's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSONIG00000018365	zgc:171482	97	61.749	ENSONIG00000016086	zmat4a	97	61.749
ENSONIG00000018365	zgc:171482	79	33.094	ENSONIG00000008388	zmat3	74	32.867
ENSONIG00000018365	zgc:171482	95	34.646	ENSONIG00000020374	-	51	34.646
ENSONIG00000018365	zgc:171482	97	44.493	ENSONIG00000017316	znf346	81	43.860

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000018365	zgc:171482	98	91.150	ENSAPOG00000019970	zgc:171482	99	91.150	Acanthochromis_polyacanthus
ENSONIG00000018365	zgc:171482	78	98.291	ENSACIG00000021512	zgc:171482	87	98.291	Amphilophus_citrinellus
ENSONIG00000018365	zgc:171482	78	96.774	ENSAOCG00000000751	zgc:171482	91	96.774	Amphiprion_ocellaris
ENSONIG00000018365	zgc:171482	78	96.774	ENSAPEG00000014154	zgc:171482	89	96.774	Amphiprion_percula
ENSONIG00000018365	zgc:171482	98	87.611	ENSATEG00000001371	zgc:171482	99	87.225	Anabas_testudineus
ENSONIG00000018365	zgc:171482	78	100.000	ENSACLG00000010511	zgc:171482	87	100.000	Astatotilapia_calliptera
ENSONIG00000018365	zgc:171482	98	84.956	ENSAMXG00000002299	zgc:171482	99	86.784	Astyanax_mexicanus
ENSONIG00000018365	zgc:171482	98	69.364	ENSCSEG00000006509	zgc:171482	99	69.364	Cynoglossus_semilaevis
ENSONIG00000018365	zgc:171482	98	91.150	ENSCVAG00000013606	zgc:171482	99	91.150	Cyprinodon_variegatus
ENSONIG00000018365	zgc:171482	99	84.615	ENSDARG00000074415	zgc:171482	98	84.615	Danio_rerio
ENSONIG00000018365	zgc:171482	78	92.623	ENSELUG00000021817	zgc:171482	90	92.000	Esox_lucius
ENSONIG00000018365	zgc:171482	80	65.405	ENSELUG00000017517	-	60	84.444	Esox_lucius
ENSONIG00000018365	zgc:171482	98	87.611	ENSFHEG00000002233	zgc:171482	99	87.611	Fundulus_heteroclitus
ENSONIG00000018365	zgc:171482	98	87.611	ENSGMOG00000010508	zgc:171482	99	87.611	Gadus_morhua
ENSONIG00000018365	zgc:171482	98	97.500	ENSGAFG00000009398	zgc:171482	99	72.832	Gambusia_affinis
ENSONIG00000018365	zgc:171482	98	92.208	ENSGACG00000007680	zgc:171482	99	92.208	Gasterosteus_aculeatus
ENSONIG00000018365	zgc:171482	78	99.206	ENSHBUG00000023289	zgc:171482	95	99.206	Haplochromis_burtoni
ENSONIG00000018365	zgc:171482	78	90.476	ENSHCOG00000018086	zgc:171482	94	90.476	Hippocampus_comes
ENSONIG00000018365	zgc:171482	78	94.872	ENSIPUG00000000361	zgc:171482	85	94.872	Ictalurus_punctatus
ENSONIG00000018365	zgc:171482	51	78.632	ENSIPUG00000000356	-	90	72.180	Ictalurus_punctatus
ENSONIG00000018365	zgc:171482	98	87.225	ENSKMAG00000005077	zgc:171482	85	87.225	Kryptolebias_marmoratus
ENSONIG00000018365	zgc:171482	78	92.857	ENSLBEG00000023823	zgc:171482	90	92.857	Labrus_bergylta
ENSONIG00000018365	zgc:171482	98	83.260	ENSLOCG00000008863	zgc:171482	97	82.833	Lepisosteus_oculatus
ENSONIG00000018365	zgc:171482	97	93.651	ENSMAMG00000001031	zgc:171482	79	93.651	Mastacembelus_armatus
ENSONIG00000018365	zgc:171482	98	90.265	ENSMZEG00005027721	zgc:171482	99	90.265	Maylandia_zebra
ENSONIG00000018365	zgc:171482	78	96.032	ENSMMOG00000010523	zgc:171482	96	96.032	Mola_mola
ENSONIG00000018365	zgc:171482	98	92.982	ENSMALG00000017883	zgc:171482	99	93.421	Monopterus_albus
ENSONIG00000018365	zgc:171482	78	98.276	ENSNBRG00000021035	zgc:171482	87	98.276	Neolamprologus_brichardi
ENSONIG00000018365	zgc:171482	98	90.265	ENSORLG00000007607	zgc:171482	99	90.265	Oryzias_latipes
ENSONIG00000018365	zgc:171482	98	87.281	ENSORLG00020003563	zgc:171482	99	87.281	Oryzias_latipes_hni
ENSONIG00000018365	zgc:171482	98	90.265	ENSORLG00015008552	zgc:171482	99	90.265	Oryzias_latipes_hsok
ENSONIG00000018365	zgc:171482	78	94.444	ENSOMEG00000003526	zgc:171482	88	95.200	Oryzias_melastigma
ENSONIG00000018365	zgc:171482	78	90.909	ENSPKIG00000016244	zgc:171482	91	81.679	Paramormyrops_kingsleyae
ENSONIG00000018365	zgc:171482	78	95.690	ENSPKIG00000015911	-	81	95.690	Paramormyrops_kingsleyae
ENSONIG00000018365	zgc:171482	98	87.448	ENSPMGG00000020230	zgc:171482	100	87.448	Periophthalmus_magnuspinnatus
ENSONIG00000018365	zgc:171482	99	90.083	ENSPFOG00000001974	zgc:171482	98	90.083	Poecilia_formosa
ENSONIG00000018365	zgc:171482	98	92.478	ENSPLAG00000003327	zgc:171482	99	92.478	Poecilia_latipinna
ENSONIG00000018365	zgc:171482	99	95.238	ENSPMEG00000004988	zgc:171482	99	87.225	Poecilia_mexicana
ENSONIG00000018365	zgc:171482	78	95.238	ENSPREG00000019241	zgc:171482	91	96.000	Poecilia_reticulata
ENSONIG00000018365	zgc:171482	78	100.000	ENSPNYG00000007773	zgc:171482	87	100.000	Pundamilia_nyererei
ENSONIG00000018365	zgc:171482	98	84.783	ENSPNAG00000007619	zgc:171482	97	86.522	Pygocentrus_nattereri
ENSONIG00000018365	zgc:171482	78	83.582	ENSSFOG00015021238	zgc:171482	87	83.582	Scleropages_formosus
ENSONIG00000018365	zgc:171482	78	88.889	ENSSFOG00015016149	zgc:171482	94	88.889	Scleropages_formosus
ENSONIG00000018365	zgc:171482	78	94.444	ENSSMAG00000002715	zgc:171482	81	94.444	Scophthalmus_maximus
ENSONIG00000018365	zgc:171482	78	96.032	ENSSDUG00000008773	zgc:171482	89	96.032	Seriola_dumerili
ENSONIG00000018365	zgc:171482	78	96.032	ENSSLDG00000019510	zgc:171482	89	96.032	Seriola_lalandi_dorsalis
ENSONIG00000018365	zgc:171482	78	96.774	ENSSPAG00000013724	zgc:171482	98	96.774	Stegastes_partitus
ENSONIG00000018365	zgc:171482	84	92.742	ENSTRUG00000005705	zgc:171482	73	92.742	Takifugu_rubripes
ENSONIG00000018365	zgc:171482	98	81.057	ENSTNIG00000008679	zgc:171482	99	81.057	Tetraodon_nigroviridis
ENSONIG00000018365	zgc:171482	83	58.621	ENSXETG00000013525	zmat4	83	60.432	Xenopus_tropicalis
ENSONIG00000018365	zgc:171482	98	86.777	ENSXMAG00000002641	zgc:171482	99	65.517	Xiphophorus_maculatus