EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSONIG00000018381 (Gene tree)
Gene ID: -
Gene Symbol: fubp1
Alias: -
Full Name: far upstream element binding protein 1
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Minus strand
Length: 11030 bases
Position: chrGL831198.1:671744-682773
Accession: 100694872
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000023141	KH_1	PF00013.29	1.1e-67	1	4
ENSONIP00000023141	KH_1	PF00013.29	1.1e-67	2	4
ENSONIP00000023141	KH_1	PF00013.29	1.1e-67	3	4
ENSONIP00000023141	KH_1	PF00013.29	1.1e-67	4	4
ENSONIP00000023140	KH_1	PF00013.29	1.3e-67	1	4
ENSONIP00000023140	KH_1	PF00013.29	1.3e-67	2	4
ENSONIP00000023140	KH_1	PF00013.29	1.3e-67	3	4
ENSONIP00000023140	KH_1	PF00013.29	1.3e-67	4	4
ENSONIP00000023141	KH_2	PF07650.17	6.6e-21	1	2
ENSONIP00000023141	KH_2	PF07650.17	6.6e-21	2	2
ENSONIP00000023140	KH_2	PF07650.17	8.8e-21	1	2
ENSONIP00000023140	KH_2	PF07650.17	8.8e-21	2	2
ENSONIP00000023140	DUF1897	PF09005.10	1.8e-15	1	2
ENSONIP00000023140	DUF1897	PF09005.10	1.8e-15	2	2
ENSONIP00000023141	DUF1897	PF09005.10	1.5e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000023160	-	2144	-	ENSONIP00000023140	671 (aa)	XP_005476742	I3KPU5
ENSONIT00000023161	-	1893	-	ENSONIP00000023141	631 (aa)	-	I3KPU6

Gene Model

Click here to download ENSONIG00000018381's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000018381's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSONIG00000018381	fubp1	69	55.346	ENSONIG00000002163	KHSRP	98	52.774
ENSONIG00000018381	fubp1	97	54.729	ENSONIG00000017713	khsrp	99	54.252
ENSONIG00000018381	fubp1	52	41.667	ENSONIG00000017378	-	70	41.667
ENSONIG00000018381	fubp1	52	35.802	ENSONIG00000018552	pcbp4	52	35.802
ENSONIG00000018381	fubp1	52	30.357	ENSONIG00000009029	igf2bp2b	65	30.357
ENSONIG00000018381	fubp1	56	32.927	ENSONIG00000004506	igf2bp3	65	32.121
ENSONIG00000018381	fubp1	56	39.726	ENSONIG00000017003	pcbp2	68	39.726
ENSONIG00000018381	fubp1	97	47.994	ENSONIG00000002861	fubp3	96	45.929
ENSONIG00000018381	fubp1	50	33.750	ENSONIG00000012122	-	62	33.750
ENSONIG00000018381	fubp1	60	41.333	ENSONIG00000005135	PCBP2	68	41.333
ENSONIG00000018381	fubp1	56	38.356	ENSONIG00000010370	zgc:110045	57	38.202
ENSONIG00000018381	fubp1	96	49.026	ENSONIG00000000666	-	95	48.926
ENSONIG00000018381	fubp1	58	40.741	ENSONIG00000004611	-	70	40.741

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000018381	fubp1	69	78.337	ENSG00000162613	FUBP1	99	69.985	Homo_sapiens
ENSONIG00000018381	fubp1	100	89.564	ENSAPOG00000014845	fubp1	92	96.926	Acanthochromis_polyacanthus
ENSONIG00000018381	fubp1	69	74.636	ENSAMEG00000007372	FUBP1	99	67.816	Ailuropoda_melanoleuca
ENSONIG00000018381	fubp1	99	89.812	ENSACIG00000020024	fubp1	99	89.812	Amphilophus_citrinellus
ENSONIG00000018381	fubp1	99	91.352	ENSAPEG00000012232	fubp1	99	91.352	Amphiprion_percula
ENSONIG00000018381	fubp1	99	96.519	ENSATEG00000018619	fubp1	99	97.393	Anabas_testudineus
ENSONIG00000018381	fubp1	65	80.630	ENSAPLG00000005965	FUBP1	100	70.894	Anas_platyrhynchos
ENSONIG00000018381	fubp1	69	74.843	ENSACAG00000006310	FUBP1	99	68.864	Anolis_carolinensis
ENSONIG00000018381	fubp1	100	99.851	ENSACLG00000006708	fubp1	100	99.851	Astatotilapia_calliptera
ENSONIG00000018381	fubp1	87	84.444	ENSAMXG00000005525	fubp1	100	83.859	Astyanax_mexicanus
ENSONIG00000018381	fubp1	69	78.556	ENSCJAG00000007062	FUBP1	99	70.238	Callithrix_jacchus
ENSONIG00000018381	fubp1	69	78.384	ENSCAFG00000020361	FUBP1	99	70.134	Canis_familiaris
ENSONIG00000018381	fubp1	65	79.904	ENSTSYG00000000148	FUBP1	99	70.142	Carlito_syrichta
ENSONIG00000018381	fubp1	55	84.677	ENSCAPG00000011052	-	65	84.677	Cavia_aperea
ENSONIG00000018381	fubp1	69	78.384	ENSCPOG00000002757	FUBP1	100	69.536	Cavia_porcellus
ENSONIG00000018381	fubp1	88	64.183	ENSCCAG00000036537	FUBP1	99	64.756	Cebus_capucinus
ENSONIG00000018381	fubp1	69	78.166	ENSCATG00000042126	FUBP1	99	69.985	Cercocebus_atys
ENSONIG00000018381	fubp1	69	78.384	ENSCLAG00000005621	FUBP1	100	72.152	Chinchilla_lanigera
ENSONIG00000018381	fubp1	69	78.166	ENSCSAG00000001402	FUBP1	99	69.985	Chlorocebus_sabaeus
ENSONIG00000018381	fubp1	69	78.166	ENSCHOG00000008177	FUBP1	98	70.282	Choloepus_hoffmanni
ENSONIG00000018381	fubp1	69	79.646	ENSCGRG00001007103	Fubp1	99	70.492	Cricetulus_griseus_chok1gshd
ENSONIG00000018381	fubp1	65	80.144	ENSCGRG00000003372	Fubp1	99	69.969	Cricetulus_griseus_crigri
ENSONIG00000018381	fubp1	99	93.968	ENSCSEG00000021412	fubp1	98	93.333	Cynoglossus_semilaevis
ENSONIG00000018381	fubp1	97	93.731	ENSCVAG00000014487	fubp1	99	94.343	Cyprinodon_variegatus
ENSONIG00000018381	fubp1	99	85.070	ENSDARG00000029248	fubp1	99	83.458	Danio_rerio
ENSONIG00000018381	fubp1	82	53.659	ENSDNOG00000034565	-	78	59.091	Dasypus_novemcinctus
ENSONIG00000018381	fubp1	69	78.384	ENSDORG00000016534	Fubp1	98	70.134	Dipodomys_ordii
ENSONIG00000018381	fubp1	74	78.363	ENSETEG00000000948	-	58	78.324	Echinops_telfairi
ENSONIG00000018381	fubp1	62	68.254	ENSEBUG00000016143	fubp1	64	62.687	Eptatretus_burgeri
ENSONIG00000018381	fubp1	72	82.770	ENSEEUG00000001287	FUBP1	87	70.000	Erinaceus_europaeus
ENSONIG00000018381	fubp1	99	83.670	ENSELUG00000007990	fubp1	99	85.219	Esox_lucius
ENSONIG00000018381	fubp1	69	79.379	ENSFALG00000005768	FUBP1	100	70.597	Ficedula_albicollis
ENSONIG00000018381	fubp1	69	78.166	ENSFDAG00000014210	FUBP1	100	70.270	Fukomys_damarensis
ENSONIG00000018381	fubp1	99	93.671	ENSFHEG00000005230	fubp1	99	95.092	Fundulus_heteroclitus
ENSONIG00000018381	fubp1	99	85.243	ENSGMOG00000003370	fubp1	99	84.591	Gadus_morhua
ENSONIG00000018381	fubp1	69	79.867	ENSGALG00000008939	FUBP1	99	71.101	Gallus_gallus
ENSONIG00000018381	fubp1	99	92.224	ENSGAFG00000020972	fubp1	99	93.665	Gambusia_affinis
ENSONIG00000018381	fubp1	99	89.875	ENSGACG00000016563	fubp1	99	89.720	Gasterosteus_aculeatus
ENSONIG00000018381	fubp1	100	100.000	ENSHBUG00000009835	fubp1	100	100.000	Haplochromis_burtoni
ENSONIG00000018381	fubp1	71	74.082	ENSHGLG00000002808	-	99	63.964	Heterocephalus_glaber_female
ENSONIG00000018381	fubp1	69	78.384	ENSHGLG00000008415	-	100	72.152	Heterocephalus_glaber_female
ENSONIG00000018381	fubp1	71	74.730	ENSHGLG00100001414	-	99	64.565	Heterocephalus_glaber_male
ENSONIG00000018381	fubp1	69	78.384	ENSHGLG00100003417	-	99	69.822	Heterocephalus_glaber_male
ENSONIG00000018381	fubp1	99	90.278	ENSHCOG00000000910	fubp1	99	91.467	Hippocampus_comes
ENSONIG00000018381	fubp1	99	82.965	ENSIPUG00000009896	fubp1	99	84.451	Ictalurus_punctatus
ENSONIG00000018381	fubp1	69	78.971	ENSSTOG00000014312	FUBP1	100	70.134	Ictidomys_tridecemlineatus
ENSONIG00000018381	fubp1	69	79.018	ENSJJAG00000020069	Fubp1	100	70.270	Jaculus_jaculus
ENSONIG00000018381	fubp1	97	93.893	ENSKMAG00000018897	fubp1	99	94.046	Kryptolebias_marmoratus
ENSONIG00000018381	fubp1	97	92.548	ENSLBEG00000012700	fubp1	97	93.145	Labrus_bergylta
ENSONIG00000018381	fubp1	95	80.902	ENSLOCG00000003745	fubp1	99	80.265	Lepisosteus_oculatus
ENSONIG00000018381	fubp1	69	75.262	ENSLAFG00000003273	FUBP1	99	70.833	Loxodonta_africana
ENSONIG00000018381	fubp1	69	78.337	ENSMFAG00000031825	FUBP1	99	70.089	Macaca_fascicularis
ENSONIG00000018381	fubp1	69	78.747	ENSMMUG00000002899	FUBP1	99	69.985	Macaca_mulatta
ENSONIG00000018381	fubp1	69	78.166	ENSMNEG00000045212	FUBP1	100	69.679	Macaca_nemestrina
ENSONIG00000018381	fubp1	97	95.482	ENSMAMG00000007489	fubp1	99	95.482	Mastacembelus_armatus
ENSONIG00000018381	fubp1	99	99.046	ENSMZEG00005024298	fubp1	99	99.846	Maylandia_zebra
ENSONIG00000018381	fubp1	65	80.676	ENSMGAG00000009424	FUBP1	99	71.104	Meleagris_gallopavo
ENSONIG00000018381	fubp1	69	78.603	ENSMAUG00000016428	Fubp1	98	70.946	Mesocricetus_auratus
ENSONIG00000018381	fubp1	69	79.075	ENSMOCG00000014751	Fubp1	99	70.393	Microtus_ochrogaster
ENSONIG00000018381	fubp1	86	93.636	ENSMMOG00000019463	fubp1	99	93.078	Mola_mola
ENSONIG00000018381	fubp1	67	72.809	ENSMODG00000020804	FUBP1	100	65.606	Monodelphis_domestica
ENSONIG00000018381	fubp1	99	95.563	ENSMALG00000015173	fubp1	99	96.467	Monopterus_albus
ENSONIG00000018381	fubp1	69	79.029	MGP_CAROLIEiJ_G0025740	Fubp1	99	75.856	Mus_caroli
ENSONIG00000018381	fubp1	69	78.808	ENSMUSG00000028034	Fubp1	99	75.665	Mus_musculus
ENSONIG00000018381	fubp1	69	78.855	MGP_PahariEiJ_G0027191	Fubp1	99	75.712	Mus_pahari
ENSONIG00000018381	fubp1	69	79.029	MGP_SPRETEiJ_G0026693	Fubp1	99	75.856	Mus_spretus
ENSONIG00000018381	fubp1	69	74.481	ENSMLUG00000014802	FUBP1	99	67.595	Myotis_lucifugus
ENSONIG00000018381	fubp1	69	75.717	ENSNGAG00000014302	Fubp1	98	70.270	Nannospalax_galili
ENSONIG00000018381	fubp1	99	93.959	ENSNBRG00000015099	fubp1	99	93.959	Neolamprologus_brichardi
ENSONIG00000018381	fubp1	69	73.626	ENSNLEG00000009772	FUBP1	99	68.554	Nomascus_leucogenys
ENSONIG00000018381	fubp1	86	69.914	ENSOPRG00000001175	FUBP1	98	59.613	Ochotona_princeps
ENSONIG00000018381	fubp1	99	53.678	ENSODEG00000003657	-	100	50.392	Octodon_degus
ENSONIG00000018381	fubp1	69	78.384	ENSODEG00000002600	-	100	70.270	Octodon_degus
ENSONIG00000018381	fubp1	60	81.137	ENSOANG00000009777	FUBP1	99	71.173	Ornithorhynchus_anatinus
ENSONIG00000018381	fubp1	100	89.065	ENSORLG00000003540	fubp1	99	88.906	Oryzias_latipes
ENSONIG00000018381	fubp1	97	92.824	ENSORLG00020005908	fubp1	95	93.282	Oryzias_latipes_hni
ENSONIG00000018381	fubp1	99	92.610	ENSORLG00015008779	fubp1	99	93.140	Oryzias_latipes_hsok
ENSONIG00000018381	fubp1	97	93.119	ENSOMEG00000021943	fubp1	97	93.578	Oryzias_melastigma
ENSONIG00000018381	fubp1	69	74.327	ENSOGAG00000014233	FUBP1	99	67.429	Otolemur_garnettii
ENSONIG00000018381	fubp1	69	78.808	ENSOARG00000013259	FUBP1	99	72.470	Ovis_aries
ENSONIG00000018381	fubp1	69	78.384	ENSPPRG00000000413	FUBP1	99	70.134	Panthera_pardus
ENSONIG00000018381	fubp1	69	78.384	ENSPTIG00000019450	FUBP1	99	70.134	Panthera_tigris_altaica
ENSONIG00000018381	fubp1	66	79.245	ENSPSIG00000012965	FUBP1	99	71.129	Pelodiscus_sinensis
ENSONIG00000018381	fubp1	99	83.022	ENSPMGG00000009060	fubp1	99	81.931	Periophthalmus_magnuspinnatus
ENSONIG00000018381	fubp1	69	79.470	ENSPEMG00000021802	Fubp1	100	70.270	Peromyscus_maniculatus_bairdii
ENSONIG00000018381	fubp1	62	60.699	ENSPMAG00000001644	-	93	60.699	Petromyzon_marinus
ENSONIG00000018381	fubp1	97	94.939	ENSPFOG00000000238	fubp1	99	95.552	Poecilia_formosa
ENSONIG00000018381	fubp1	99	91.905	ENSPLAG00000021170	fubp1	99	92.627	Poecilia_latipinna
ENSONIG00000018381	fubp1	100	89.796	ENSPMEG00000004747	fubp1	99	96.823	Poecilia_mexicana
ENSONIG00000018381	fubp1	100	93.849	ENSPREG00000017911	fubp1	99	95.399	Poecilia_reticulata
ENSONIG00000018381	fubp1	71	77.778	ENSPPYG00000001219	-	68	78.901	Pongo_abelii
ENSONIG00000018381	fubp1	69	78.337	ENSPCAG00000012617	FUBP1	98	70.089	Procavia_capensis
ENSONIG00000018381	fubp1	69	78.667	ENSPCOG00000024974	FUBP1	99	70.134	Propithecus_coquereli
ENSONIG00000018381	fubp1	69	72.271	ENSPVAG00000014637	FUBP1	98	65.973	Pteropus_vampyrus
ENSONIG00000018381	fubp1	99	99.046	ENSPNYG00000004552	fubp1	99	99.846	Pundamilia_nyererei
ENSONIG00000018381	fubp1	97	86.495	ENSPNAG00000016207	fubp1	100	85.888	Pygocentrus_nattereri
ENSONIG00000018381	fubp1	69	79.029	ENSRNOG00000043370	Fubp1	99	70.343	Rattus_norvegicus
ENSONIG00000018381	fubp1	69	78.166	ENSRBIG00000042950	FUBP1	99	69.985	Rhinopithecus_bieti
ENSONIG00000018381	fubp1	69	78.166	ENSRROG00000043534	FUBP1	99	69.985	Rhinopithecus_roxellana
ENSONIG00000018381	fubp1	69	78.384	ENSSBOG00000027299	FUBP1	99	70.134	Saimiri_boliviensis_boliviensis
ENSONIG00000018381	fubp1	65	78.910	ENSSHAG00000005367	FUBP1	98	71.506	Sarcophilus_harrisii
ENSONIG00000018381	fubp1	99	83.175	ENSSFOG00015010213	fubp1	99	84.615	Scleropages_formosus
ENSONIG00000018381	fubp1	97	89.851	ENSSMAG00000012029	fubp1	98	89.701	Scophthalmus_maximus
ENSONIG00000018381	fubp1	100	96.496	ENSSDUG00000007383	fubp1	98	96.496	Seriola_dumerili
ENSONIG00000018381	fubp1	99	95.490	ENSSLDG00000022863	fubp1	98	96.380	Seriola_lalandi_dorsalis
ENSONIG00000018381	fubp1	69	87.356	ENSSARG00000011730	FUBP1	56	88.372	Sorex_araneus
ENSONIG00000018381	fubp1	99	69.298	ENSSPUG00000008389	FUBP1	98	70.088	Sphenodon_punctatus
ENSONIG00000018381	fubp1	97	98.310	ENSSPAG00000010161	fubp1	99	98.310	Stegastes_partitus
ENSONIG00000018381	fubp1	65	79.714	ENSTGUG00000006841	FUBP1	100	70.376	Taeniopygia_guttata
ENSONIG00000018381	fubp1	97	89.333	ENSTRUG00000004615	fubp1	99	88.296	Takifugu_rubripes
ENSONIG00000018381	fubp1	76	82.738	ENSTBEG00000017333	FUBP1	62	88.690	Tupaia_belangeri
ENSONIG00000018381	fubp1	69	78.384	ENSTTRG00000000096	FUBP1	98	69.985	Tursiops_truncatus
ENSONIG00000018381	fubp1	69	78.384	ENSVPAG00000004709	FUBP1	99	69.985	Vicugna_pacos
ENSONIG00000018381	fubp1	99	83.805	ENSXCOG00000019354	fubp1	99	82.575	Xiphophorus_couchianus
ENSONIG00000018381	fubp1	97	90.645	ENSXMAG00000007168	fubp1	99	96.488	Xiphophorus_maculatus