EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSONIG00000018469 (Gene tree)
Gene ID: 100696992
Gene Symbol: rab12
Alias: -
Full Name: RAB12%2C member RAS oncogene family
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Plus strand
Length: 10901 bases
Position: chrGL831198.1:1098577-1109477
Accession: 100696992
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000023251	MMR_HSR1	PF01926.23	4.7e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000023271	-	3955	XM_003448457	ENSONIP00000023251	243 (aa)	XP_003448505	I3KQ56

Gene Model

Click here to download ENSONIG00000018469's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000018469's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSONIG00000018469	rab12	70	45.029	ENSONIG00000005781	rab15	80	45.029
ENSONIG00000018469	rab12	68	37.059	ENSONIG00000020296	si:dkey-13a21.4	82	37.059
ENSONIG00000018469	rab12	69	39.227	ENSONIG00000011559	rab33ba	84	38.537
ENSONIG00000018469	rab12	63	35.849	ENSONIG00000009749	rab23	73	33.889
ENSONIG00000018469	rab12	65	35.220	ENSONIG00000006876	rab22a	81	35.220
ENSONIG00000018469	rab12	84	39.806	ENSONIG00000002410	rab25a	88	41.081
ENSONIG00000018469	rab12	68	30.000	ENSONIG00000011866	rasl11a	68	30.000
ENSONIG00000018469	rab12	65	37.342	ENSONIG00000011542	-	97	37.342
ENSONIG00000018469	rab12	78	36.458	ENSONIG00000002774	RAB41	74	40.127
ENSONIG00000018469	rab12	74	37.569	ENSONIG00000016776	RAB17	86	42.038
ENSONIG00000018469	rab12	62	35.526	ENSONIG00000007797	rras	83	36.207
ENSONIG00000018469	rab12	67	35.119	ENSONIG00000020581	rab9b	83	35.119
ENSONIG00000018469	rab12	79	36.364	ENSONIG00000015828	rab33a	58	40.244
ENSONIG00000018469	rab12	68	37.278	ENSONIG00000019036	-	81	37.278
ENSONIG00000018469	rab12	83	36.139	ENSONIG00000004394	rab6a	76	40.625
ENSONIG00000018469	rab12	70	42.012	ENSONIG00000002284	rab25b	81	42.012
ENSONIG00000018469	rab12	66	35.366	ENSONIG00000013175	rab34a	61	36.585
ENSONIG00000018469	rab12	65	36.196	ENSONIG00000020945	-	80	36.196
ENSONIG00000018469	rab12	67	35.119	ENSONIG00000020675	rab9a	82	35.119
ENSONIG00000018469	rab12	69	36.905	ENSONIG00000001113	rab5c	76	36.905
ENSONIG00000018469	rab12	77	37.895	ENSONIG00000020336	RAB7A	81	37.278
ENSONIG00000018469	rab12	84	38.679	ENSONIG00000002544	-	75	43.636
ENSONIG00000018469	rab12	67	38.462	ENSONIG00000014892	RAB29	81	38.462
ENSONIG00000018469	rab12	77	45.455	ENSONIG00000005708	rab30	90	45.455
ENSONIG00000018469	rab12	62	31.788	ENSONIG00000014717	kras	85	32.099
ENSONIG00000018469	rab12	71	40.462	ENSONIG00000000558	-	80	40.462
ENSONIG00000018469	rab12	66	38.750	ENSONIG00000002425	rab5aa	77	37.500
ENSONIG00000018469	rab12	69	41.916	ENSONIG00000009443	si:dkey-16l2.16	78	42.424
ENSONIG00000018469	rab12	67	48.780	ENSONIG00000003725	rab18a	79	48.780
ENSONIG00000018469	rab12	68	32.335	ENSONIG00000018503	rheb	89	32.335
ENSONIG00000018469	rab12	85	36.321	ENSONIG00000014099	rab14	80	40.462
ENSONIG00000018469	rab12	68	43.452	ENSONIG00000006997	-	78	43.452
ENSONIG00000018469	rab12	78	45.503	ENSONIG00000006819	-	91	45.699
ENSONIG00000018469	rab12	68	43.114	ENSONIG00000008545	RAB39B	78	43.114
ENSONIG00000018469	rab12	80	48.223	ENSONIG00000006340	rab13	88	51.124
ENSONIG00000018469	rab12	67	33.129	ENSONIG00000014885	rabl2	71	32.515
ENSONIG00000018469	rab12	84	38.571	ENSONIG00000002281	rab11al	76	43.030
ENSONIG00000018469	rab12	67	49.390	ENSONIG00000018673	rab18b	79	49.390
ENSONIG00000018469	rab12	84	38.967	ENSONIG00000015072	RAB11A	95	38.967
ENSONIG00000018469	rab12	67	45.679	ENSONIG00000015990	rab35b	89	43.094
ENSONIG00000018469	rab12	65	32.704	ENSONIG00000019066	rhebl1	85	32.704
ENSONIG00000018469	rab12	85	39.906	ENSONIG00000012069	RAB15	84	43.017
ENSONIG00000018469	rab12	64	30.435	ENSONIG00000004448	si:ch73-116o1.2	80	30.814
ENSONIG00000018469	rab12	73	39.560	ENSONIG00000006715	-	77	39.560
ENSONIG00000018469	rab12	79	40.625	ENSONIG00000016622	rab2a	79	44.048
ENSONIG00000018469	rab12	70	49.112	ENSONIG00000002065	rab1ba	82	49.112
ENSONIG00000018469	rab12	78	37.696	ENSONIG00000009886	rab6bb	84	38.286
ENSONIG00000018469	rab12	60	37.908	ENSONIG00000003367	-	73	37.908
ENSONIG00000018469	rab12	71	40.462	ENSONIG00000016851	-	80	40.462
ENSONIG00000018469	rab12	69	38.690	ENSONIG00000016279	-	75	37.500
ENSONIG00000018469	rab12	84	38.426	ENSONIG00000010435	rab11bb	75	43.636
ENSONIG00000018469	rab12	82	30.918	ENSONIG00000005519	rab34b	63	35.000
ENSONIG00000018469	rab12	84	38.426	ENSONIG00000002535	rab11ba	80	41.667

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000018469	rab12	93	84.581	ENSG00000206418	RAB12	91	87.892	Homo_sapiens
ENSONIG00000018469	rab12	89	78.082	ENSAMEG00000007452	RAB12	94	81.735	Ailuropoda_melanoleuca
ENSONIG00000018469	rab12	100	98.361	ENSACIG00000020616	rab12	100	98.361	Amphilophus_citrinellus
ENSONIG00000018469	rab12	100	97.942	ENSAOCG00000002130	rab12	100	97.942	Amphiprion_ocellaris
ENSONIG00000018469	rab12	100	97.942	ENSAPEG00000013255	rab12	100	97.942	Amphiprion_percula
ENSONIG00000018469	rab12	100	97.531	ENSATEG00000019683	rab12	100	97.531	Anabas_testudineus
ENSONIG00000018469	rab12	82	89.500	ENSACAG00000003360	RAB12	86	87.892	Anolis_carolinensis
ENSONIG00000018469	rab12	100	99.588	ENSACLG00000007696	rab12	100	99.588	Astatotilapia_calliptera
ENSONIG00000018469	rab12	100	89.431	ENSAMXG00000004882	rab12	100	90.244	Astyanax_mexicanus
ENSONIG00000018469	rab12	93	85.022	ENSBTAG00000010356	RAB12	91	88.341	Bos_taurus
ENSONIG00000018469	rab12	93	84.513	ENSCJAG00000015468	RAB12	72	84.082	Callithrix_jacchus
ENSONIG00000018469	rab12	93	84.581	ENSCAFG00020023721	RAB12	84	84.146	Canis_lupus_dingo
ENSONIG00000018469	rab12	93	85.022	ENSCHIG00000016103	RAB12	91	88.341	Capra_hircus
ENSONIG00000018469	rab12	86	85.238	ENSCPOG00000022689	RAB12	100	89.524	Cavia_porcellus
ENSONIG00000018469	rab12	93	84.513	ENSCCAG00000022862	RAB12	100	84.082	Cebus_capucinus
ENSONIG00000018469	rab12	91	84.375	ENSCATG00000037784	RAB12	93	87.892	Cercocebus_atys
ENSONIG00000018469	rab12	84	88.780	ENSCSAG00000017569	RAB12	72	83.871	Chlorocebus_sabaeus
ENSONIG00000018469	rab12	93	83.700	ENSCPBG00000028375	RAB12	91	88.341	Chrysemys_picta_bellii
ENSONIG00000018469	rab12	89	84.475	ENSCANG00000031453	RAB12	99	88.128	Colobus_angolensis_palliatus
ENSONIG00000018469	rab12	93	84.141	ENSCGRG00001006958	Rab12	83	83.333	Cricetulus_griseus_chok1gshd
ENSONIG00000018469	rab12	100	97.531	ENSCSEG00000016933	rab12	100	97.531	Cynoglossus_semilaevis
ENSONIG00000018469	rab12	100	96.748	ENSCVAG00000003539	rab12	100	96.748	Cyprinodon_variegatus
ENSONIG00000018469	rab12	100	87.654	ENSDARG00000089428	rab12	94	93.636	Danio_rerio
ENSONIG00000018469	rab12	84	88.293	ENSDNOG00000046064	RAB12	51	87.444	Dasypus_novemcinctus
ENSONIG00000018469	rab12	91	84.375	ENSDORG00000008920	Rab12	98	87.892	Dipodomys_ordii
ENSONIG00000018469	rab12	78	66.138	ENSEBUG00000006581	rab12	89	67.582	Eptatretus_burgeri
ENSONIG00000018469	rab12	93	84.141	ENSEASG00005002926	RAB12	83	83.740	Equus_asinus_asinus
ENSONIG00000018469	rab12	93	84.141	ENSECAG00000007384	RAB12	71	83.740	Equus_caballus
ENSONIG00000018469	rab12	100	90.947	ENSELUG00000007123	rab12	100	88.889	Esox_lucius
ENSONIG00000018469	rab12	93	84.581	ENSFCAG00000027710	RAB12	72	84.146	Felis_catus
ENSONIG00000018469	rab12	100	96.735	ENSFHEG00000004319	rab12	100	96.735	Fundulus_heteroclitus
ENSONIG00000018469	rab12	86	92.823	ENSGMOG00000012335	rab12	87	91.388	Gadus_morhua
ENSONIG00000018469	rab12	93	83.772	ENSGALG00000033608	RAB12	89	87.892	Gallus_gallus
ENSONIG00000018469	rab12	97	87.712	ENSGACG00000016639	rab12	100	93.119	Gasterosteus_aculeatus
ENSONIG00000018469	rab12	93	83.260	ENSGAGG00000007278	RAB12	91	88.341	Gopherus_agassizii
ENSONIG00000018469	rab12	100	99.588	ENSHBUG00000008497	rab12	100	99.588	Haplochromis_burtoni
ENSONIG00000018469	rab12	97	79.747	ENSHGLG00000006189	RAB12	86	88.235	Heterocephalus_glaber_female
ENSONIG00000018469	rab12	100	91.358	ENSHCOG00000012376	rab12	100	91.358	Hippocampus_comes
ENSONIG00000018469	rab12	91	93.213	ENSIPUG00000017401	rab12	90	93.182	Ictalurus_punctatus
ENSONIG00000018469	rab12	92	81.858	ENSSTOG00000025122	RAB12	96	87.671	Ictidomys_tridecemlineatus
ENSONIG00000018469	rab12	91	84.375	ENSJJAG00000019064	Rab12	98	87.892	Jaculus_jaculus
ENSONIG00000018469	rab12	100	93.004	ENSKMAG00000020056	rab12	100	91.770	Kryptolebias_marmoratus
ENSONIG00000018469	rab12	100	97.531	ENSLBEG00000013756	rab12	100	97.531	Labrus_bergylta
ENSONIG00000018469	rab12	91	87.892	ENSLACG00000010461	RAB12	90	87.892	Latimeria_chalumnae
ENSONIG00000018469	rab12	93	87.336	ENSLOCG00000002680	rab12	100	87.500	Lepisosteus_oculatus
ENSONIG00000018469	rab12	93	85.022	ENSMFAG00000043551	RAB12	100	84.553	Macaca_fascicularis
ENSONIG00000018469	rab12	84	88.780	ENSMNEG00000040853	RAB12	88	87.892	Macaca_nemestrina
ENSONIG00000018469	rab12	100	97.531	ENSMAMG00000006862	rab12	100	97.531	Mastacembelus_armatus
ENSONIG00000018469	rab12	100	99.588	ENSMZEG00005024316	rab12	100	99.588	Maylandia_zebra
ENSONIG00000018469	rab12	83	84.804	ENSMGAG00000009197	RAB12	100	88.725	Meleagris_gallopavo
ENSONIG00000018469	rab12	93	84.141	ENSMAUG00000008371	Rab12	83	83.333	Mesocricetus_auratus
ENSONIG00000018469	rab12	91	83.929	ENSMICG00000030661	RAB12	93	87.444	Microcebus_murinus
ENSONIG00000018469	rab12	89	84.018	ENSMOCG00000000452	Rab12	100	87.671	Microtus_ochrogaster
ENSONIG00000018469	rab12	93	85.022	ENSMODG00000021452	RAB12	73	84.553	Monodelphis_domestica
ENSONIG00000018469	rab12	100	94.650	ENSMALG00000015762	rab12	100	93.416	Monopterus_albus
ENSONIG00000018469	rab12	93	85.022	MGP_CAROLIEiJ_G0021839	Rab12	84	84.146	Mus_caroli
ENSONIG00000018469	rab12	93	85.022	ENSMUSG00000023460	Rab12	100	84.146	Mus_musculus
ENSONIG00000018469	rab12	93	85.022	MGP_PahariEiJ_G0020826	Rab12	100	84.146	Mus_pahari
ENSONIG00000018469	rab12	93	85.022	MGP_SPRETEiJ_G0022750	Rab12	83	84.146	Mus_spretus
ENSONIG00000018469	rab12	100	80.488	ENSMLUG00000002883	RAB12	92	87.892	Myotis_lucifugus
ENSONIG00000018469	rab12	95	81.545	ENSNGAG00000024103	-	95	87.444	Nannospalax_galili
ENSONIG00000018469	rab12	91	77.232	ENSNGAG00000019722	-	91	77.130	Nannospalax_galili
ENSONIG00000018469	rab12	100	99.588	ENSNBRG00000014428	rab12	100	99.588	Neolamprologus_brichardi
ENSONIG00000018469	rab12	93	84.581	ENSNLEG00000006939	RAB12	91	87.892	Nomascus_leucogenys
ENSONIG00000018469	rab12	100	80.894	ENSMEUG00000000493	RAB12	100	84.146	Notamacropus_eugenii
ENSONIG00000018469	rab12	89	85.388	ENSODEG00000006414	RAB12	100	89.041	Octodon_degus
ENSONIG00000018469	rab12	100	97.531	ENSORLG00000003902	rab12	100	97.531	Oryzias_latipes
ENSONIG00000018469	rab12	100	97.531	ENSORLG00020005131	rab12	100	97.531	Oryzias_latipes_hni
ENSONIG00000018469	rab12	100	97.119	ENSORLG00015007869	rab12	100	97.119	Oryzias_latipes_hsok
ENSONIG00000018469	rab12	100	98.354	ENSOMEG00000008191	rab12	100	98.354	Oryzias_melastigma
ENSONIG00000018469	rab12	86	84.762	ENSOGAG00000028002	RAB12	99	88.571	Otolemur_garnettii
ENSONIG00000018469	rab12	79	89.529	ENSOARG00000000728	RAB12	88	87.442	Ovis_aries
ENSONIG00000018469	rab12	84	84.541	ENSPPAG00000009152	RAB12	97	88.835	Pan_paniscus
ENSONIG00000018469	rab12	93	84.581	ENSPPRG00000024521	RAB12	91	87.892	Panthera_pardus
ENSONIG00000018469	rab12	93	84.581	ENSPTRG00000009853	RAB12	91	87.892	Pan_troglodytes
ENSONIG00000018469	rab12	93	85.088	ENSPANG00000009320	RAB12	90	88.341	Papio_anubis
ENSONIG00000018469	rab12	100	89.344	ENSPKIG00000008579	rab12	100	89.754	Paramormyrops_kingsleyae
ENSONIG00000018469	rab12	100	90.123	ENSPMGG00000001890	rab12	100	91.358	Periophthalmus_magnuspinnatus
ENSONIG00000018469	rab12	93	84.581	ENSPEMG00000021032	Rab12	84	83.740	Peromyscus_maniculatus_bairdii
ENSONIG00000018469	rab12	93	84.581	ENSPCIG00000010453	RAB12	56	88.341	Phascolarctos_cinereus
ENSONIG00000018469	rab12	100	96.311	ENSPFOG00000001579	rab12	100	96.311	Poecilia_formosa
ENSONIG00000018469	rab12	100	96.311	ENSPLAG00000013594	rab12	100	96.311	Poecilia_latipinna
ENSONIG00000018469	rab12	100	96.311	ENSPMEG00000010417	rab12	100	96.311	Poecilia_mexicana
ENSONIG00000018469	rab12	100	96.721	ENSPREG00000017487	rab12	100	96.721	Poecilia_reticulata
ENSONIG00000018469	rab12	93	84.581	ENSPPYG00000009015	-	72	84.146	Pongo_abelii
ENSONIG00000018469	rab12	93	84.141	ENSPCAG00000015007	RAB12	100	83.740	Procavia_capensis
ENSONIG00000018469	rab12	93	84.581	ENSPCOG00000019816	RAB12	91	87.892	Propithecus_coquereli
ENSONIG00000018469	rab12	93	84.141	ENSPVAG00000002757	RAB12	91	87.444	Pteropus_vampyrus
ENSONIG00000018469	rab12	100	99.588	ENSPNYG00000023905	rab12	100	99.588	Pundamilia_nyererei
ENSONIG00000018469	rab12	100	99.588	ENSPNYG00000005654	rab12	100	99.588	Pundamilia_nyererei
ENSONIG00000018469	rab12	100	88.618	ENSPNAG00000015031	rab12	100	89.431	Pygocentrus_nattereri
ENSONIG00000018469	rab12	93	82.895	ENSRNOG00000019295	Rab12	91	82.456	Rattus_norvegicus
ENSONIG00000018469	rab12	91	84.375	ENSRBIG00000028760	RAB12	96	87.892	Rhinopithecus_bieti
ENSONIG00000018469	rab12	91	84.375	ENSRROG00000019249	RAB12	93	87.892	Rhinopithecus_roxellana
ENSONIG00000018469	rab12	94	79.654	ENSSBOG00000021125	RAB12	80	88.517	Saimiri_boliviensis_boliviensis
ENSONIG00000018469	rab12	93	84.071	ENSSHAG00000001489	RAB12	100	84.071	Sarcophilus_harrisii
ENSONIG00000018469	rab12	100	96.296	ENSSMAG00000012678	rab12	100	96.296	Scophthalmus_maximus
ENSONIG00000018469	rab12	100	98.354	ENSSDUG00000008505	rab12	100	98.354	Seriola_dumerili
ENSONIG00000018469	rab12	100	98.354	ENSSLDG00000022239	rab12	100	98.354	Seriola_lalandi_dorsalis
ENSONIG00000018469	rab12	93	85.022	ENSSPUG00000003222	RAB12	100	84.553	Sphenodon_punctatus
ENSONIG00000018469	rab12	100	98.354	ENSSPAG00000010822	rab12	100	98.354	Stegastes_partitus
ENSONIG00000018469	rab12	93	85.022	ENSSSCG00000038026	RAB12	91	88.789	Sus_scrofa
ENSONIG00000018469	rab12	86	88.517	ENSTGUG00000009889	RAB12	89	88.341	Taeniopygia_guttata
ENSONIG00000018469	rab12	100	93.416	ENSTRUG00000024455	rab12	100	92.181	Takifugu_rubripes
ENSONIG00000018469	rab12	100	94.239	ENSTNIG00000014859	rab12	100	93.004	Tetraodon_nigroviridis
ENSONIG00000018469	rab12	89	84.475	ENSTTRG00000008711	RAB12	99	88.128	Tursiops_truncatus
ENSONIG00000018469	rab12	93	84.581	ENSUAMG00000018092	RAB12	91	87.892	Ursus_americanus
ENSONIG00000018469	rab12	90	83.710	ENSVVUG00000011748	RAB12	99	87.330	Vulpes_vulpes
ENSONIG00000018469	rab12	86	89.151	ENSXETG00000004289	rab12	72	89.286	Xenopus_tropicalis
ENSONIG00000018469	rab12	100	94.262	ENSXCOG00000019310	rab12	100	94.672	Xiphophorus_couchianus
ENSONIG00000018469	rab12	100	94.672	ENSXMAG00000023617	rab12	100	95.082	Xiphophorus_maculatus