EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSONIG00000018720 (Gene tree)
Gene ID: 100696623
Gene Symbol: xrn2
Alias: -
Full Name: 5'-3' exoribonuclease 2
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Minus strand
Length: 48865 bases
Position: chrGL831182.1:1296873-1345737
Accession: ZDB-GENE-040426-2874
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000023567	XRN_N	PF03159.18	2.3e-101	1	1
ENSONIP00000023568	XRN_N	PF03159.18	4.3e-101	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000023588	-	7127	-	ENSONIP00000023567	1010 (aa)	-	I3KR22
ENSONIT00000023589	-	2883	-	ENSONIP00000023568	960 (aa)	-	I3KR23

Gene Model

Click here to download ENSONIG00000018720's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000018720's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000018720	xrn2	100	71.959	ENSG00000088930	XRN2	100	71.753	Homo_sapiens
ENSONIG00000018720	xrn2	100	85.189	ENSAPOG00000009818	xrn2	100	87.398	Acanthochromis_polyacanthus
ENSONIG00000018720	xrn2	100	71.959	ENSAMEG00000012581	XRN2	100	71.753	Ailuropoda_melanoleuca
ENSONIG00000018720	xrn2	89	85.488	ENSACIG00000015047	xrn2	95	91.538	Amphilophus_citrinellus
ENSONIG00000018720	xrn2	100	85.685	ENSAOCG00000023632	xrn2	100	87.894	Amphiprion_ocellaris
ENSONIG00000018720	xrn2	100	85.802	ENSAPEG00000014871	xrn2	100	88.008	Amphiprion_percula
ENSONIG00000018720	xrn2	96	85.714	ENSATEG00000001273	xrn2	97	89.020	Anabas_testudineus
ENSONIG00000018720	xrn2	98	70.476	ENSAPLG00000013869	XRN2	100	69.101	Anas_platyrhynchos
ENSONIG00000018720	xrn2	100	71.282	ENSACAG00000005565	XRN2	100	70.709	Anolis_carolinensis
ENSONIG00000018720	xrn2	100	71.959	ENSANAG00000020126	XRN2	100	71.753	Aotus_nancymaae
ENSONIG00000018720	xrn2	91	92.264	ENSACLG00000010522	xrn2	98	95.607	Astatotilapia_calliptera
ENSONIG00000018720	xrn2	100	78.252	ENSAMXG00000018301	xrn2	100	78.636	Astyanax_mexicanus
ENSONIG00000018720	xrn2	100	71.473	ENSBTAG00000011304	XRN2	100	71.267	Bos_taurus
ENSONIG00000018720	xrn2	85	54.396	WBGene00006964	xrn-2	98	51.653	Caenorhabditis_elegans
ENSONIG00000018720	xrn2	100	71.753	ENSCJAG00000005611	XRN2	100	71.546	Callithrix_jacchus
ENSONIG00000018720	xrn2	100	71.856	ENSCAFG00000005185	XRN2	100	71.649	Canis_familiaris
ENSONIG00000018720	xrn2	100	71.856	ENSCAFG00020027479	XRN2	100	71.649	Canis_lupus_dingo
ENSONIG00000018720	xrn2	100	71.164	ENSCHIG00000006921	XRN2	100	70.958	Capra_hircus
ENSONIG00000018720	xrn2	100	71.591	ENSTSYG00000008315	XRN2	100	71.591	Carlito_syrichta
ENSONIG00000018720	xrn2	97	61.799	ENSCAPG00000010773	XRN2	99	60.635	Cavia_aperea
ENSONIG00000018720	xrn2	100	72.371	ENSCPOG00000009407	XRN2	100	72.165	Cavia_porcellus
ENSONIG00000018720	xrn2	100	71.856	ENSCATG00000040350	XRN2	100	71.649	Cercocebus_atys
ENSONIG00000018720	xrn2	100	72.165	ENSCLAG00000013419	XRN2	100	71.959	Chinchilla_lanigera
ENSONIG00000018720	xrn2	100	71.856	ENSCSAG00000011094	XRN2	100	71.649	Chlorocebus_sabaeus
ENSONIG00000018720	xrn2	67	86.702	ENSCHOG00000013404	XRN2	63	87.634	Choloepus_hoffmanni
ENSONIG00000018720	xrn2	100	72.222	ENSCPBG00000023533	XRN2	100	71.959	Chrysemys_picta_bellii
ENSONIG00000018720	xrn2	85	60.263	ENSCING00000022336	-	100	61.256	Ciona_intestinalis
ENSONIG00000018720	xrn2	89	57.542	ENSCSAVG00000011217	-	93	70.602	Ciona_savignyi
ENSONIG00000018720	xrn2	100	71.856	ENSCANG00000040240	XRN2	100	71.649	Colobus_angolensis_palliatus
ENSONIG00000018720	xrn2	96	73.069	ENSCGRG00001010676	Xrn2	98	73.139	Cricetulus_griseus_chok1gshd
ENSONIG00000018720	xrn2	97	71.231	ENSCGRG00000006378	Xrn2	99	70.719	Cricetulus_griseus_crigri
ENSONIG00000018720	xrn2	53	79.961	ENSCSEG00000005628	xrn2	100	79.767	Cynoglossus_semilaevis
ENSONIG00000018720	xrn2	89	83.977	ENSCVAG00000018999	xrn2	98	91.778	Cyprinodon_variegatus
ENSONIG00000018720	xrn2	100	77.259	ENSDARG00000101900	xrn2	96	86.807	Danio_rerio
ENSONIG00000018720	xrn2	100	71.856	ENSDNOG00000001895	XRN2	100	71.649	Dasypus_novemcinctus
ENSONIG00000018720	xrn2	100	70.309	ENSDORG00000005434	Xrn2	100	70.103	Dipodomys_ordii
ENSONIG00000018720	xrn2	86	54.921	FBgn0031868	Rat1	92	53.723	Drosophila_melanogaster
ENSONIG00000018720	xrn2	100	63.185	ENSETEG00000001740	XRN2	93	80.779	Echinops_telfairi
ENSONIG00000018720	xrn2	83	68.204	ENSEBUG00000016136	xrn2	100	68.932	Eptatretus_burgeri
ENSONIG00000018720	xrn2	100	72.400	ENSEASG00005002484	XRN2	100	72.194	Equus_asinus_asinus
ENSONIG00000018720	xrn2	94	92.308	ENSECAG00000018988	XRN2	96	92.308	Equus_caballus
ENSONIG00000018720	xrn2	81	96.000	ENSEEUG00000009265	XRN2	79	96.000	Erinaceus_europaeus
ENSONIG00000018720	xrn2	100	78.819	ENSELUG00000000552	xrn2	100	79.819	Esox_lucius
ENSONIG00000018720	xrn2	100	71.753	ENSFCAG00000007970	XRN2	100	71.546	Felis_catus
ENSONIG00000018720	xrn2	100	70.576	ENSFALG00000004508	XRN2	100	70.062	Ficedula_albicollis
ENSONIG00000018720	xrn2	100	71.753	ENSFDAG00000016311	XRN2	100	71.546	Fukomys_damarensis
ENSONIG00000018720	xrn2	51	83.716	ENSFHEG00000013039	xrn2	98	83.716	Fundulus_heteroclitus
ENSONIG00000018720	xrn2	85	80.779	ENSGMOG00000013436	xrn2	100	80.779	Gadus_morhua
ENSONIG00000018720	xrn2	100	70.795	ENSGALG00000008372	XRN2	100	69.453	Gallus_gallus
ENSONIG00000018720	xrn2	89	85.780	ENSGAFG00000014284	xrn2	99	87.572	Gambusia_affinis
ENSONIG00000018720	xrn2	86	84.699	ENSGACG00000011870	xrn2	100	84.940	Gasterosteus_aculeatus
ENSONIG00000018720	xrn2	100	71.546	ENSGAGG00000004884	XRN2	100	71.753	Gopherus_agassizii
ENSONIG00000018720	xrn2	100	71.856	ENSGGOG00000013738	XRN2	100	71.649	Gorilla_gorilla
ENSONIG00000018720	xrn2	51	94.798	ENSHBUG00000005077	xrn2	94	94.798	Haplochromis_burtoni
ENSONIG00000018720	xrn2	100	71.370	ENSHGLG00000014831	XRN2	100	71.164	Heterocephalus_glaber_female
ENSONIG00000018720	xrn2	100	71.370	ENSHGLG00100013130	XRN2	100	71.164	Heterocephalus_glaber_male
ENSONIG00000018720	xrn2	99	80.020	ENSHCOG00000011994	xrn2	99	81.206	Hippocampus_comes
ENSONIG00000018720	xrn2	100	77.024	ENSIPUG00000006639	xrn2	100	77.100	Ictalurus_punctatus
ENSONIG00000018720	xrn2	100	71.856	ENSSTOG00000000589	XRN2	100	71.649	Ictidomys_tridecemlineatus
ENSONIG00000018720	xrn2	100	72.464	ENSJJAG00000022128	Xrn2	100	72.062	Jaculus_jaculus
ENSONIG00000018720	xrn2	53	88.911	ENSLBEG00000010041	xrn2	100	88.911	Labrus_bergylta
ENSONIG00000018720	xrn2	93	73.702	ENSLACG00000008307	XRN2	98	77.531	Latimeria_chalumnae
ENSONIG00000018720	xrn2	99	73.967	ENSLOCG00000016874	xrn2	93	80.730	Lepisosteus_oculatus
ENSONIG00000018720	xrn2	100	72.091	ENSLAFG00000014624	XRN2	100	71.885	Loxodonta_africana
ENSONIG00000018720	xrn2	100	71.856	ENSMFAG00000038122	XRN2	100	71.649	Macaca_fascicularis
ENSONIG00000018720	xrn2	100	71.856	ENSMMUG00000011405	XRN2	100	71.649	Macaca_mulatta
ENSONIG00000018720	xrn2	100	71.753	ENSMNEG00000040626	XRN2	100	71.546	Macaca_nemestrina
ENSONIG00000018720	xrn2	100	71.753	ENSMLEG00000041897	XRN2	100	71.546	Mandrillus_leucophaeus
ENSONIG00000018720	xrn2	95	87.802	ENSMAMG00000008633	xrn2	96	88.769	Mastacembelus_armatus
ENSONIG00000018720	xrn2	91	93.970	ENSMZEG00005022362	xrn2	98	97.341	Maylandia_zebra
ENSONIG00000018720	xrn2	99	69.650	ENSMGAG00000003196	XRN2	96	71.061	Meleagris_gallopavo
ENSONIG00000018720	xrn2	100	72.314	ENSMAUG00000021842	Xrn2	100	72.107	Mesocricetus_auratus
ENSONIG00000018720	xrn2	100	71.856	ENSMICG00000008126	XRN2	100	71.649	Microcebus_murinus
ENSONIG00000018720	xrn2	100	72.033	ENSMOCG00000012588	Xrn2	100	71.753	Microtus_ochrogaster
ENSONIG00000018720	xrn2	89	85.051	ENSMMOG00000017576	xrn2	97	86.667	Mola_mola
ENSONIG00000018720	xrn2	100	72.435	ENSMODG00000006163	XRN2	100	72.004	Monodelphis_domestica
ENSONIG00000018720	xrn2	93	86.731	ENSMALG00000011355	xrn2	100	86.972	Monopterus_albus
ENSONIG00000018720	xrn2	100	72.033	MGP_CAROLIEiJ_G0024400	Xrn2	100	71.753	Mus_caroli
ENSONIG00000018720	xrn2	100	71.930	ENSMUSG00000027433	Xrn2	100	71.649	Mus_musculus
ENSONIG00000018720	xrn2	100	71.827	MGP_PahariEiJ_G0025843	Xrn2	100	71.546	Mus_pahari
ENSONIG00000018720	xrn2	100	71.930	MGP_SPRETEiJ_G0025318	Xrn2	94	84.545	Mus_spretus
ENSONIG00000018720	xrn2	100	70.618	ENSMPUG00000001198	XRN2	93	70.415	Mustela_putorius_furo
ENSONIG00000018720	xrn2	100	71.930	ENSMLUG00000001536	XRN2	100	71.723	Myotis_lucifugus
ENSONIG00000018720	xrn2	100	72.091	ENSNGAG00000018138	Xrn2	100	71.959	Nannospalax_galili
ENSONIG00000018720	xrn2	91	94.077	ENSNBRG00000008062	xrn2	98	97.454	Neolamprologus_brichardi
ENSONIG00000018720	xrn2	100	71.959	ENSNLEG00000009991	XRN2	100	71.753	Nomascus_leucogenys
ENSONIG00000018720	xrn2	66	93.333	ENSMEUG00000008622	-	67	93.333	Notamacropus_eugenii
ENSONIG00000018720	xrn2	75	71.354	ENSOPRG00000001397	-	77	72.105	Ochotona_princeps
ENSONIG00000018720	xrn2	100	71.856	ENSODEG00000010745	-	100	71.649	Octodon_degus
ENSONIG00000018720	xrn2	98	65.323	ENSODEG00000000860	-	97	65.899	Octodon_degus
ENSONIG00000018720	xrn2	100	71.620	ENSOANG00000015673	XRN2	100	70.485	Ornithorhynchus_anatinus
ENSONIG00000018720	xrn2	100	72.165	ENSOCUG00000013468	XRN2	100	71.959	Oryctolagus_cuniculus
ENSONIG00000018720	xrn2	98	82.432	ENSORLG00000017213	xrn2	99	86.621	Oryzias_latipes
ENSONIG00000018720	xrn2	98	82.328	ENSORLG00020001824	xrn2	100	82.591	Oryzias_latipes_hni
ENSONIG00000018720	xrn2	98	81.913	ENSORLG00015019747	xrn2	100	82.591	Oryzias_latipes_hsok
ENSONIG00000018720	xrn2	97	81.283	ENSOMEG00000019820	xrn2	100	82.038	Oryzias_melastigma
ENSONIG00000018720	xrn2	100	71.885	ENSOGAG00000001068	XRN2	100	71.679	Otolemur_garnettii
ENSONIG00000018720	xrn2	97	70.582	ENSOARG00000004443	XRN2	99	70.370	Ovis_aries
ENSONIG00000018720	xrn2	100	71.856	ENSPPAG00000033549	XRN2	100	71.649	Pan_paniscus
ENSONIG00000018720	xrn2	100	71.753	ENSPPRG00000008732	XRN2	100	71.546	Panthera_pardus
ENSONIG00000018720	xrn2	97	71.186	ENSPTIG00000015683	XRN2	97	70.975	Panthera_tigris_altaica
ENSONIG00000018720	xrn2	100	71.856	ENSPTRG00000013308	XRN2	100	71.649	Pan_troglodytes
ENSONIG00000018720	xrn2	100	71.856	ENSPANG00000018088	XRN2	100	71.649	Papio_anubis
ENSONIG00000018720	xrn2	100	74.949	ENSPKIG00000016889	xrn2	100	75.887	Paramormyrops_kingsleyae
ENSONIG00000018720	xrn2	80	76.554	ENSPSIG00000014666	XRN2	100	76.554	Pelodiscus_sinensis
ENSONIG00000018720	xrn2	100	71.930	ENSPEMG00000000111	Xrn2	100	71.649	Peromyscus_maniculatus_bairdii
ENSONIG00000018720	xrn2	100	82.645	ENSPFOG00000004182	xrn2	99	82.591	Poecilia_formosa
ENSONIG00000018720	xrn2	89	85.436	ENSPLAG00000007351	xrn2	97	87.227	Poecilia_latipinna
ENSONIG00000018720	xrn2	94	81.582	ENSPMEG00000011798	xrn2	99	82.869	Poecilia_mexicana
ENSONIG00000018720	xrn2	90	84.738	ENSPREG00000012452	xrn2	99	86.735	Poecilia_reticulata
ENSONIG00000018720	xrn2	100	71.649	ENSPPYG00000010755	XRN2	100	71.443	Pongo_abelii
ENSONIG00000018720	xrn2	100	67.798	ENSPCAG00000011191	XRN2	100	67.831	Procavia_capensis
ENSONIG00000018720	xrn2	100	65.876	ENSPCOG00000016468	XRN2	100	65.670	Propithecus_coquereli
ENSONIG00000018720	xrn2	93	67.207	ENSPVAG00000004596	XRN2	93	67.207	Pteropus_vampyrus
ENSONIG00000018720	xrn2	91	92.264	ENSPNYG00000001765	xrn2	98	95.607	Pundamilia_nyererei
ENSONIG00000018720	xrn2	100	77.250	ENSPNAG00000010956	xrn2	99	77.423	Pygocentrus_nattereri
ENSONIG00000018720	xrn2	100	72.239	ENSRNOG00000011785	Xrn2	100	71.959	Rattus_norvegicus
ENSONIG00000018720	xrn2	85	77.494	ENSRBIG00000036193	XRN2	100	77.494	Rhinopithecus_bieti
ENSONIG00000018720	xrn2	100	71.856	ENSRROG00000044400	XRN2	90	71.649	Rhinopithecus_roxellana
ENSONIG00000018720	xrn2	90	51.670	YOR048C	RAT1	78	53.623	Saccharomyces_cerevisiae
ENSONIG00000018720	xrn2	100	71.959	ENSSBOG00000021014	XRN2	100	71.753	Saimiri_boliviensis_boliviensis
ENSONIG00000018720	xrn2	100	76.531	ENSSFOG00015001091	xrn2	100	76.606	Scleropages_formosus
ENSONIG00000018720	xrn2	100	81.744	ENSSMAG00000007834	xrn2	100	84.024	Scophthalmus_maximus
ENSONIG00000018720	xrn2	91	84.216	ENSSDUG00000012802	xrn2	99	87.287	Seriola_dumerili
ENSONIG00000018720	xrn2	92	88.549	ENSSLDG00000021273	xrn2	99	90.260	Seriola_lalandi_dorsalis
ENSONIG00000018720	xrn2	76	96.000	ENSSARG00000005859	-	76	96.000	Sorex_araneus
ENSONIG00000018720	xrn2	97	69.158	ENSSPUG00000005485	XRN2	94	70.098	Sphenodon_punctatus
ENSONIG00000018720	xrn2	100	85.861	ENSSPAG00000016027	xrn2	99	87.513	Stegastes_partitus
ENSONIG00000018720	xrn2	100	70.515	ENSSSCG00000007109	XRN2	100	70.309	Sus_scrofa
ENSONIG00000018720	xrn2	100	69.806	ENSTGUG00000007535	XRN2	100	69.294	Taeniopygia_guttata
ENSONIG00000018720	xrn2	100	81.606	ENSTRUG00000015489	xrn2	100	82.745	Takifugu_rubripes
ENSONIG00000018720	xrn2	100	79.403	ENSTNIG00000010712	xrn2	100	78.660	Tetraodon_nigroviridis
ENSONIG00000018720	xrn2	100	71.753	ENSTBEG00000004119	XRN2	100	71.546	Tupaia_belangeri
ENSONIG00000018720	xrn2	93	79.249	ENSTTRG00000009087	XRN2	93	79.249	Tursiops_truncatus
ENSONIG00000018720	xrn2	100	71.959	ENSUAMG00000024634	XRN2	96	85.888	Ursus_americanus
ENSONIG00000018720	xrn2	97	71.292	ENSUMAG00000004012	XRN2	95	71.081	Ursus_maritimus
ENSONIG00000018720	xrn2	89	66.705	ENSVPAG00000010694	XRN2	91	66.473	Vicugna_pacos
ENSONIG00000018720	xrn2	100	71.856	ENSVVUG00000012178	XRN2	100	71.649	Vulpes_vulpes
ENSONIG00000018720	xrn2	100	72.182	ENSXETG00000023501	xrn2	100	72.182	Xenopus_tropicalis
ENSONIG00000018720	xrn2	100	82.275	ENSXMAG00000000242	xrn2	99	82.794	Xiphophorus_maculatus