EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSONIG00000018812 (Gene tree)
Gene ID
-
Gene Symbol
cpsf3
Alias
-
Full Name
cleavage and polyadenylation specificity factor subunit 3
Gene Type
protein_coding
Species
Oreochromis_niloticus
Status
putative
Strand
Minus strand
Length
8119 bases
Position
chrGL831182.1:3353267-3361385
Accession
100692710
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSONIP00000023686CPSF73-100_CPF11718.81.4e-5311
ENSONIP00000023686Beta-CaspPF10996.89e-3411
ENSONIP00000023686Lactamase_BPF00753.271.5e-1811
ENSONIP00000023686RMMBLPF07521.121.5e-2111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSONIT00000023707-3069-ENSONIP00000023686686 (aa)XP_013127741I3KRE1
Gene Model
Click here to download ENSONIG00000018812's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000018812's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSONIG00000018812cpsf39987.936ENSONIG00000003694CPSF39987.936
ENSONIG00000018812cpsf36838.784ENSONIG00000016600ints117938.784
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSONIG00000018812cpsf39985.756ENSG00000119203CPSF310098.529Homo_sapiens
ENSONIG00000018812cpsf37496.464ENSAPOG00000012241CPSF39196.464Acanthochromis_polyacanthus
ENSONIG00000018812cpsf310095.190ENSAPOG00000022087cpsf310095.190Acanthochromis_polyacanthus
ENSONIG00000018812cpsf39985.903ENSAMEG00000008493CPSF39985.903Ailuropoda_melanoleuca
ENSONIG00000018812cpsf39193.610ENSACIG00000009846cpsf310086.754Amphilophus_citrinellus
ENSONIG00000018812cpsf39186.645ENSACIG00000023663CPSF39980.697Amphilophus_citrinellus
ENSONIG00000018812cpsf39988.808ENSAOCG00000010077CPSF39988.808Amphiprion_ocellaris
ENSONIG00000018812cpsf310095.190ENSAOCG00000022056cpsf310095.190Amphiprion_ocellaris
ENSONIG00000018812cpsf39988.808ENSAPEG00000021167CPSF39988.808Amphiprion_percula
ENSONIG00000018812cpsf310095.335ENSAPEG00000019526cpsf310095.335Amphiprion_percula
ENSONIG00000018812cpsf39995.029ENSATEG00000003959cpsf39995.029Anabas_testudineus
ENSONIG00000018812cpsf39984.884ENSATEG00000014525CPSF39984.884Anabas_testudineus
ENSONIG00000018812cpsf39785.821ENSAPLG00000006941CPSF39885.821Anas_platyrhynchos
ENSONIG00000018812cpsf39283.596ENSACAG00000001759CPSF39983.596Anolis_carolinensis
ENSONIG00000018812cpsf39980.910ENSANAG00000031254CPSF39981.532Aotus_nancymaae
ENSONIG00000018812cpsf39799.094ENSACLG00000014484cpsf39999.094Astatotilapia_calliptera
ENSONIG00000018812cpsf39186.963ENSACLG00000018846CPSF39986.963Astatotilapia_calliptera
ENSONIG00000018812cpsf39986.773ENSAMXG00000004786cpsf39986.773Astyanax_mexicanus
ENSONIG00000018812cpsf39985.903ENSBTAG00000019735CPSF39985.903Bos_taurus
ENSONIG00000018812cpsf39057.571WBGene00013460cpsf-38957.571Caenorhabditis_elegans
ENSONIG00000018812cpsf39985.609ENSCJAG00000006276CPSF39985.609Callithrix_jacchus
ENSONIG00000018812cpsf39985.903ENSCAFG00000003375CPSF39585.903Canis_familiaris
ENSONIG00000018812cpsf39088.511ENSCAFG00020026799CPSF39988.511Canis_lupus_dingo
ENSONIG00000018812cpsf39985.903ENSCHIG00000013973CPSF39985.903Capra_hircus
ENSONIG00000018812cpsf39985.756ENSTSYG00000002967CPSF39985.756Carlito_syrichta
ENSONIG00000018812cpsf39686.316ENSCAPG00000013851CPSF39986.316Cavia_aperea
ENSONIG00000018812cpsf39986.197ENSCPOG00000011299CPSF39986.197Cavia_porcellus
ENSONIG00000018812cpsf39985.609ENSCCAG00000036730CPSF39985.736Cebus_capucinus
ENSONIG00000018812cpsf39983.700ENSCATG00000014770CPSF39991.207Cercocebus_atys
ENSONIG00000018812cpsf39986.197ENSCLAG00000002727CPSF39986.197Chinchilla_lanigera
ENSONIG00000018812cpsf39977.974ENSCSAG00000007125CPSF39977.974Chlorocebus_sabaeus
ENSONIG00000018812cpsf385100.000ENSCHOG00000000180CPSF38561.620Choloepus_hoffmanni
ENSONIG00000018812cpsf39986.067ENSCPBG00000014074CPSF39986.067Chrysemys_picta_bellii
ENSONIG00000018812cpsf39868.182ENSCING00000007214-9768.182Ciona_intestinalis
ENSONIG00000018812cpsf39975.802ENSCANG00000034435CPSF39975.802Colobus_angolensis_palliatus
ENSONIG00000018812cpsf39985.463ENSCGRG00001013134Cpsf39985.463Cricetulus_griseus_chok1gshd
ENSONIG00000018812cpsf39985.463ENSCGRG00000018319Cpsf39985.463Cricetulus_griseus_crigri
ENSONIG00000018812cpsf39987.373ENSCSEG00000002021CPSF39987.442Cynoglossus_semilaevis
ENSONIG00000018812cpsf39988.372ENSCVAG00000015067CPSF39988.372Cyprinodon_variegatus
ENSONIG00000018812cpsf310086.812ENSDARG00000027649cpsf310086.812Danio_rerio
ENSONIG00000018812cpsf39985.044ENSDNOG00000008940CPSF39585.044Dasypus_novemcinctus
ENSONIG00000018812cpsf39587.385ENSDORG00000014263Cpsf39987.385Dipodomys_ordii
ENSONIG00000018812cpsf39967.548FBgn0261065Cpsf739967.548Drosophila_melanogaster
ENSONIG00000018812cpsf39574.769ENSETEG00000003893CPSF39974.769Echinops_telfairi
ENSONIG00000018812cpsf39975.989ENSEBUG00000009018cpsf39975.989Eptatretus_burgeri
ENSONIG00000018812cpsf39985.903ENSEASG00005003970CPSF39985.903Equus_asinus_asinus
ENSONIG00000018812cpsf39985.903ENSECAG00000019911CPSF39690.909Equus_caballus
ENSONIG00000018812cpsf39970.925ENSEEUG00000015422CPSF39970.925Erinaceus_europaeus
ENSONIG00000018812cpsf39990.421ENSELUG00000013775cpsf39990.421Esox_lucius
ENSONIG00000018812cpsf39985.903ENSFCAG00000007852CPSF39985.903Felis_catus
ENSONIG00000018812cpsf39485.317ENSFALG00000006572CPSF310085.317Ficedula_albicollis
ENSONIG00000018812cpsf39985.609ENSFDAG00000006317CPSF39985.609Fukomys_damarensis
ENSONIG00000018812cpsf310092.420ENSFHEG00000014774cpsf310092.420Fundulus_heteroclitus
ENSONIG00000018812cpsf35868.049ENSFHEG00000012186CPSF310068.049Fundulus_heteroclitus
ENSONIG00000018812cpsf310090.566ENSGMOG00000003157cpsf310090.566Gadus_morhua
ENSONIG00000018812cpsf39985.631ENSGALG00000016424CPSF39985.631Gallus_gallus
ENSONIG00000018812cpsf310088.696ENSGAFG00000008016CPSF310088.696Gambusia_affinis
ENSONIG00000018812cpsf39791.040ENSGAFG00000019449cpsf310084.694Gambusia_affinis
ENSONIG00000018812cpsf36781.585ENSGAGG00000025583CPSF39381.585Gopherus_agassizii
ENSONIG00000018812cpsf39983.621ENSGGOG00000001757CPSF39196.360Gorilla_gorilla
ENSONIG00000018812cpsf35880.741ENSHBUG00000014332CPSF310080.741Haplochromis_burtoni
ENSONIG00000018812cpsf310098.980ENSHBUG00000001188cpsf310098.980Haplochromis_burtoni
ENSONIG00000018812cpsf39985.756ENSHGLG00000000666CPSF39985.756Heterocephalus_glaber_female
ENSONIG00000018812cpsf39985.756ENSHGLG00100007765CPSF39985.756Heterocephalus_glaber_male
ENSONIG00000018812cpsf39992.251ENSHCOG00000007251cpsf39992.251Hippocampus_comes
ENSONIG00000018812cpsf39987.355ENSHCOG00000015957CPSF39987.355Hippocampus_comes
ENSONIG00000018812cpsf39987.355ENSIPUG00000023488cpsf39987.355Ictalurus_punctatus
ENSONIG00000018812cpsf39985.463ENSSTOG00000004476CPSF39985.463Ictidomys_tridecemlineatus
ENSONIG00000018812cpsf39985.212ENSJJAG00000023415Cpsf39985.212Jaculus_jaculus
ENSONIG00000018812cpsf39987.936ENSKMAG00000007317CPSF39987.936Kryptolebias_marmoratus
ENSONIG00000018812cpsf310094.169ENSKMAG00000002806cpsf310094.169Kryptolebias_marmoratus
ENSONIG00000018812cpsf35489.785ENSLBEG00000015018-9989.785Labrus_bergylta
ENSONIG00000018812cpsf39985.380ENSLBEG00000020569cpsf39685.380Labrus_bergylta
ENSONIG00000018812cpsf39689.498ENSLBEG00000013492CPSF39989.498Labrus_bergylta
ENSONIG00000018812cpsf39980.290ENSLACG00000008308CPSF39980.290Latimeria_chalumnae
ENSONIG00000018812cpsf310086.869ENSLOCG00000016823cpsf310086.869Lepisosteus_oculatus
ENSONIG00000018812cpsf39884.956ENSLAFG00000009467CPSF39984.956Loxodonta_africana
ENSONIG00000018812cpsf39985.609ENSMFAG00000001339CPSF39891.036Macaca_fascicularis
ENSONIG00000018812cpsf39385.271ENSMMUG00000018038CPSF39293.568Macaca_mulatta
ENSONIG00000018812cpsf39096.032ENSMNEG00000039447CPSF39996.032Macaca_nemestrina
ENSONIG00000018812cpsf39985.756ENSMLEG00000026825CPSF39396.154Mandrillus_leucophaeus
ENSONIG00000018812cpsf310093.586ENSMAMG00000003076cpsf310093.586Mastacembelus_armatus
ENSONIG00000018812cpsf39186.032ENSMAMG00000008835CPSF39980.000Mastacembelus_armatus
ENSONIG00000018812cpsf310098.980ENSMZEG00005014358cpsf310098.980Maylandia_zebra
ENSONIG00000018812cpsf39988.808ENSMZEG00005006258CPSF39988.808Maylandia_zebra
ENSONIG00000018812cpsf39785.607ENSMGAG00000013995CPSF310085.607Meleagris_gallopavo
ENSONIG00000018812cpsf35475.936ENSMAUG00000000166Cpsf39975.936Mesocricetus_auratus
ENSONIG00000018812cpsf39981.259ENSMICG00000002363CPSF39981.259Microcebus_murinus
ENSONIG00000018812cpsf39982.718ENSMOCG00000020067Cpsf39982.718Microtus_ochrogaster
ENSONIG00000018812cpsf39386.895ENSMMOG00000018212CPSF39886.895Mola_mola
ENSONIG00000018812cpsf38070.833ENSMMOG00000011923CPSF38477.143Mola_mola
ENSONIG00000018812cpsf39984.012ENSMODG00000014703CPSF39984.012Monodelphis_domestica
ENSONIG00000018812cpsf310094.606ENSMALG00000016416cpsf310094.606Monopterus_albus
ENSONIG00000018812cpsf39284.252ENSMALG00000011474CPSF39984.252Monopterus_albus
ENSONIG00000018812cpsf39985.756MGP_CAROLIEiJ_G0017640Cpsf39985.756Mus_caroli
ENSONIG00000018812cpsf39985.756ENSMUSG00000054309Cpsf39697.034Mus_musculus
ENSONIG00000018812cpsf39985.609MGP_PahariEiJ_G0029397Cpsf39985.609Mus_pahari
ENSONIG00000018812cpsf39985.756MGP_SPRETEiJ_G0018481Cpsf39985.756Mus_spretus
ENSONIG00000018812cpsf39986.070ENSMPUG00000013213CPSF39986.070Mustela_putorius_furo
ENSONIG00000018812cpsf39985.777ENSMLUG00000010636CPSF39985.777Myotis_lucifugus
ENSONIG00000018812cpsf39985.463ENSNGAG00000019836Cpsf39985.463Nannospalax_galili
ENSONIG00000018812cpsf310098.542ENSNBRG00000004770cpsf310098.542Neolamprologus_brichardi
ENSONIG00000018812cpsf39186.963ENSNBRG00000010525CPSF39986.963Neolamprologus_brichardi
ENSONIG00000018812cpsf39985.609ENSNLEG00000013359CPSF39196.360Nomascus_leucogenys
ENSONIG00000018812cpsf39954.919ENSMEUG00000013117-9955.066Notamacropus_eugenii
ENSONIG00000018812cpsf39977.419ENSOPRG00000008902CPSF39977.419Ochotona_princeps
ENSONIG00000018812cpsf39986.344ENSODEG00000003129CPSF39986.344Octodon_degus
ENSONIG00000018812cpsf38183.630ENSOANG00000008577CPSF39983.630Ornithorhynchus_anatinus
ENSONIG00000018812cpsf39985.903ENSOCUG00000003728CPSF39985.903Oryctolagus_cuniculus
ENSONIG00000018812cpsf310091.691ENSORLG00000018854cpsf310091.691Oryzias_latipes
ENSONIG00000018812cpsf310091.837ENSORLG00020013331cpsf310091.837Oryzias_latipes_hni
ENSONIG00000018812cpsf310091.691ENSORLG00015011017cpsf310091.691Oryzias_latipes_hsok
ENSONIG00000018812cpsf310091.983ENSOMEG00000010647cpsf39691.983Oryzias_melastigma
ENSONIG00000018812cpsf39975.918ENSOGAG00000001680CPSF39975.918Otolemur_garnettii
ENSONIG00000018812cpsf39985.903ENSOARG00000015073CPSF39985.903Ovis_aries
ENSONIG00000018812cpsf39985.756ENSPPAG00000042457CPSF39196.360Pan_paniscus
ENSONIG00000018812cpsf39985.903ENSPPRG00000016790CPSF39986.050Panthera_pardus
ENSONIG00000018812cpsf39886.283ENSPTIG00000003920CPSF39986.431Panthera_tigris_altaica
ENSONIG00000018812cpsf39985.756ENSPTRG00000011638CPSF39196.360Pan_troglodytes
ENSONIG00000018812cpsf39985.756ENSPANG00000016798CPSF39593.568Papio_anubis
ENSONIG00000018812cpsf310088.116ENSPKIG00000023646cpsf310088.116Paramormyrops_kingsleyae
ENSONIG00000018812cpsf39985.191ENSPSIG00000016144CPSF39985.191Pelodiscus_sinensis
ENSONIG00000018812cpsf39185.440ENSPMGG00000006141-10079.300Periophthalmus_magnuspinnatus
ENSONIG00000018812cpsf35880.247ENSPMGG00000015311CPSF310080.247Periophthalmus_magnuspinnatus
ENSONIG00000018812cpsf39985.463ENSPEMG00000017668Cpsf39985.609Peromyscus_maniculatus_bairdii
ENSONIG00000018812cpsf37989.134ENSPMAG00000004841cpsf39989.134Petromyzon_marinus
ENSONIG00000018812cpsf39685.263ENSPCIG00000009823CPSF39886.043Phascolarctos_cinereus
ENSONIG00000018812cpsf310088.261ENSPFOG00000010418-10088.261Poecilia_formosa
ENSONIG00000018812cpsf310092.857ENSPFOG00000015922cpsf310092.857Poecilia_formosa
ENSONIG00000018812cpsf35882.222ENSPLAG00000021300-10082.222Poecilia_latipinna
ENSONIG00000018812cpsf310092.857ENSPLAG00000000882cpsf310092.857Poecilia_latipinna
ENSONIG00000018812cpsf310093.003ENSPMEG00000018309cpsf310093.003Poecilia_mexicana
ENSONIG00000018812cpsf39790.880ENSPREG00000014875cpsf310084.548Poecilia_reticulata
ENSONIG00000018812cpsf310082.464ENSPREG00000004482CPSF310082.464Poecilia_reticulata
ENSONIG00000018812cpsf39981.498ENSPPYG00000012666CPSF39981.498Pongo_abelii
ENSONIG00000018812cpsf38664.728ENSPCAG00000015042CPSF39064.728Procavia_capensis
ENSONIG00000018812cpsf38885.567ENSPCOG00000023016CPSF39985.567Propithecus_coquereli
ENSONIG00000018812cpsf39985.777ENSPVAG00000005324CPSF39985.777Pteropus_vampyrus
ENSONIG00000018812cpsf37991.697ENSPNYG00000021047CPSF39091.697Pundamilia_nyererei
ENSONIG00000018812cpsf310098.980ENSPNYG00000004405cpsf310098.980Pundamilia_nyererei
ENSONIG00000018812cpsf39987.936ENSPNAG00000023060cpsf39987.936Pygocentrus_nattereri
ENSONIG00000018812cpsf39985.756ENSRNOG00000052418Cpsf39985.756Rattus_norvegicus
ENSONIG00000018812cpsf39980.470ENSRBIG00000041615CPSF39981.550Rhinopithecus_bieti
ENSONIG00000018812cpsf39985.756ENSRROG00000033792CPSF39985.756Rhinopithecus_roxellana
ENSONIG00000018812cpsf38840.993YLR277CYSH19040.993Saccharomyces_cerevisiae
ENSONIG00000018812cpsf39681.913ENSSBOG00000027263CPSF39781.913Saimiri_boliviensis_boliviensis
ENSONIG00000018812cpsf39985.316ENSSHAG00000007024CPSF39985.316Sarcophilus_harrisii
ENSONIG00000018812cpsf310088.116ENSSFOG00015002108cpsf310088.116Scleropages_formosus
ENSONIG00000018812cpsf39688.584ENSSMAG00000020534CPSF39788.584Scophthalmus_maximus
ENSONIG00000018812cpsf310094.606ENSSDUG00000002828cpsf39794.606Seriola_dumerili
ENSONIG00000018812cpsf39988.663ENSSDUG00000018498CPSF39988.663Seriola_dumerili
ENSONIG00000018812cpsf310094.315ENSSLDG00000008469cpsf39794.315Seriola_lalandi_dorsalis
ENSONIG00000018812cpsf39988.663ENSSLDG00000005234CPSF39988.663Seriola_lalandi_dorsalis
ENSONIG00000018812cpsf39083.114ENSSARG00000005186CPSF39083.114Sorex_araneus
ENSONIG00000018812cpsf39685.052ENSSPUG00000015525CPSF39785.052Sphenodon_punctatus
ENSONIG00000018812cpsf39988.663ENSSPAG00000002906CPSF39988.663Stegastes_partitus
ENSONIG00000018812cpsf310095.190ENSSPAG00000018579cpsf310095.190Stegastes_partitus
ENSONIG00000018812cpsf39985.903ENSSSCG00000020799CPSF39985.903Sus_scrofa
ENSONIG00000018812cpsf39985.673ENSTGUG00000013016CPSF310085.673Taeniopygia_guttata
ENSONIG00000018812cpsf35872.346ENSTRUG00000013905CPSF39972.346Takifugu_rubripes
ENSONIG00000018812cpsf39992.117ENSTRUG00000007030cpsf39892.117Takifugu_rubripes
ENSONIG00000018812cpsf38490.110ENSTBEG00000002707CPSF38490.110Tupaia_belangeri
ENSONIG00000018812cpsf38673.123ENSTTRG00000000861CPSF38773.123Tursiops_truncatus
ENSONIG00000018812cpsf39686.910ENSUAMG00000007535CPSF39486.910Ursus_americanus
ENSONIG00000018812cpsf39385.581ENSUMAG00000003676CPSF39490.860Ursus_maritimus
ENSONIG00000018812cpsf39286.435ENSVPAG00000008041CPSF310086.435Vicugna_pacos
ENSONIG00000018812cpsf39985.903ENSVVUG00000002194CPSF39985.903Vulpes_vulpes
ENSONIG00000018812cpsf39984.928ENSXETG00000008263cpsf39984.928Xenopus_tropicalis
ENSONIG00000018812cpsf35480.376ENSXCOG00000000957-8780.376Xiphophorus_couchianus
ENSONIG00000018812cpsf310092.566ENSXCOG00000019695cpsf310092.566Xiphophorus_couchianus
ENSONIG00000018812cpsf310088.406ENSXMAG00000027291CPSF310088.406Xiphophorus_maculatus
ENSONIG00000018812cpsf310092.857ENSXMAG00000009784cpsf310092.857Xiphophorus_maculatus

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