EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSONIG00000018879 (Gene tree)
Gene ID: 100709233
Gene Symbol: rpusd4
Alias: -
Full Name: mitochondrial RNA pseudouridine synthase rpusd4
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Minus strand
Length: 3397 bases
Position: chrGL831146.1:638786-642182
Accession: 100709233
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000023770	PseudoU_synth_2	PF00849.22	2.5e-26	1	1
ENSONIP00000023771	PseudoU_synth_2	PF00849.22	2.9e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000023791	-	1107	-	ENSONIP00000023770	368 (aa)	-	I3KRM5
ENSONIT00000023792	-	1207	-	ENSONIP00000023771	387 (aa)	XP_003441465	I3KRM6

Gene Model

Click here to download ENSONIG00000018879's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000018879's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000018879	rpusd4	87	52.294	ENSG00000165526	RPUSD4	89	50.581	Homo_sapiens
ENSONIG00000018879	rpusd4	99	76.684	ENSAPOG00000011024	rpusd4	97	76.684	Acanthochromis_polyacanthus
ENSONIG00000018879	rpusd4	79	46.032	ENSAMEG00000005953	-	95	46.032	Ailuropoda_melanoleuca
ENSONIG00000018879	rpusd4	92	51.312	ENSAMEG00000000127	-	89	51.312	Ailuropoda_melanoleuca
ENSONIG00000018879	rpusd4	88	87.346	ENSACIG00000003533	rpusd4	96	87.346	Amphilophus_citrinellus
ENSONIG00000018879	rpusd4	99	77.922	ENSAOCG00000015409	rpusd4	96	77.922	Amphiprion_ocellaris
ENSONIG00000018879	rpusd4	99	77.922	ENSAPEG00000018935	rpusd4	96	77.922	Amphiprion_percula
ENSONIG00000018879	rpusd4	99	75.325	ENSATEG00000008059	rpusd4	96	75.325	Anabas_testudineus
ENSONIG00000018879	rpusd4	76	51.773	ENSAPLG00000013250	RPUSD4	99	51.014	Anas_platyrhynchos
ENSONIG00000018879	rpusd4	92	48.238	ENSACAG00000000189	RPUSD4	99	48.238	Anolis_carolinensis
ENSONIG00000018879	rpusd4	92	50.291	ENSANAG00000024050	RPUSD4	90	50.291	Aotus_nancymaae
ENSONIG00000018879	rpusd4	100	96.899	ENSACLG00000020996	rpusd4	100	96.899	Astatotilapia_calliptera
ENSONIG00000018879	rpusd4	92	62.029	ENSAMXG00000031479	rpusd4	95	62.722	Astyanax_mexicanus
ENSONIG00000018879	rpusd4	91	51.327	ENSBTAG00000020900	RPUSD4	88	51.327	Bos_taurus
ENSONIG00000018879	rpusd4	92	49.854	ENSCJAG00000042850	RPUSD4	85	49.854	Callithrix_jacchus
ENSONIG00000018879	rpusd4	97	50.970	ENSCAFG00000010488	RPUSD4	94	51.524	Canis_familiaris
ENSONIG00000018879	rpusd4	97	50.970	ENSCAFG00020010621	RPUSD4	94	51.524	Canis_lupus_dingo
ENSONIG00000018879	rpusd4	91	50.737	ENSCHIG00000009975	RPUSD4	88	50.737	Capra_hircus
ENSONIG00000018879	rpusd4	94	50.997	ENSTSYG00000008456	RPUSD4	92	50.997	Carlito_syrichta
ENSONIG00000018879	rpusd4	66	48.980	ENSCAPG00000006040	RPUSD4	93	48.980	Cavia_aperea
ENSONIG00000018879	rpusd4	89	51.672	ENSCPOG00000014971	RPUSD4	93	49.716	Cavia_porcellus
ENSONIG00000018879	rpusd4	92	49.563	ENSCCAG00000027838	RPUSD4	90	49.563	Cebus_capucinus
ENSONIG00000018879	rpusd4	92	48.980	ENSCATG00000041570	RPUSD4	89	48.980	Cercocebus_atys
ENSONIG00000018879	rpusd4	91	52.059	ENSCLAG00000016553	RPUSD4	89	52.059	Chinchilla_lanigera
ENSONIG00000018879	rpusd4	92	48.980	ENSCSAG00000002274	RPUSD4	89	48.980	Chlorocebus_sabaeus
ENSONIG00000018879	rpusd4	74	52.536	ENSCHOG00000010249	RPUSD4	96	52.536	Choloepus_hoffmanni
ENSONIG00000018879	rpusd4	78	55.363	ENSCPBG00000011175	RPUSD4	99	55.363	Chrysemys_picta_bellii
ENSONIG00000018879	rpusd4	72	41.455	ENSCSAVG00000000872	-	53	41.455	Ciona_savignyi
ENSONIG00000018879	rpusd4	95	49.008	ENSCANG00000039684	RPUSD4	92	49.008	Colobus_angolensis_palliatus
ENSONIG00000018879	rpusd4	96	51.389	ENSCGRG00001024141	Rpusd4	94	51.389	Cricetulus_griseus_chok1gshd
ENSONIG00000018879	rpusd4	96	51.389	ENSCGRG00000014415	Rpusd4	94	51.389	Cricetulus_griseus_crigri
ENSONIG00000018879	rpusd4	52	62.564	ENSCSEG00000006462	-	90	59.716	Cynoglossus_semilaevis
ENSONIG00000018879	rpusd4	94	74.063	ENSCVAG00000000392	rpusd4	98	75.581	Cyprinodon_variegatus
ENSONIG00000018879	rpusd4	96	71.958	ENSCVAG00000008761	rpusd4	97	71.958	Cyprinodon_variegatus
ENSONIG00000018879	rpusd4	91	58.551	ENSDARG00000012674	rpusd4	95	59.064	Danio_rerio
ENSONIG00000018879	rpusd4	92	51.754	ENSDNOG00000020026	RPUSD4	89	51.754	Dasypus_novemcinctus
ENSONIG00000018879	rpusd4	98	49.041	ENSDORG00000016717	Rpusd4	93	49.041	Dipodomys_ordii
ENSONIG00000018879	rpusd4	95	50.712	ENSETEG00000013953	RPUSD4	92	50.712	Echinops_telfairi
ENSONIG00000018879	rpusd4	95	49.304	ENSEASG00005022982	RPUSD4	93	49.304	Equus_asinus_asinus
ENSONIG00000018879	rpusd4	88	51.829	ENSECAG00000000557	RPUSD4	86	51.829	Equus_caballus
ENSONIG00000018879	rpusd4	73	57.143	ENSEEUG00000014036	RPUSD4	71	57.143	Erinaceus_europaeus
ENSONIG00000018879	rpusd4	93	64.146	ENSELUG00000008075	rpusd4	99	61.842	Esox_lucius
ENSONIG00000018879	rpusd4	97	48.767	ENSFCAG00000029789	RPUSD4	95	49.315	Felis_catus
ENSONIG00000018879	rpusd4	90	48.955	ENSFALG00000005171	RPUSD4	98	48.955	Ficedula_albicollis
ENSONIG00000018879	rpusd4	92	51.603	ENSFDAG00000014307	RPUSD4	96	49.724	Fukomys_damarensis
ENSONIG00000018879	rpusd4	99	72.868	ENSFHEG00000004329	rpusd4	99	72.868	Fundulus_heteroclitus
ENSONIG00000018879	rpusd4	88	65.443	ENSGMOG00000017726	rpusd4	99	64.371	Gadus_morhua
ENSONIG00000018879	rpusd4	77	53.333	ENSGALG00000024326	RPUSD4	94	49.102	Gallus_gallus
ENSONIG00000018879	rpusd4	99	70.918	ENSGAFG00000021559	rpusd4	99	70.918	Gambusia_affinis
ENSONIG00000018879	rpusd4	90	73.874	ENSGACG00000001657	rpusd4	97	77.617	Gasterosteus_aculeatus
ENSONIG00000018879	rpusd4	89	51.576	ENSGAGG00000000132	RPUSD4	95	51.576	Gopherus_agassizii
ENSONIG00000018879	rpusd4	95	49.582	ENSGGOG00000016494	RPUSD4	94	49.582	Gorilla_gorilla
ENSONIG00000018879	rpusd4	100	96.382	ENSHBUG00000022838	rpusd4	100	96.382	Haplochromis_burtoni
ENSONIG00000018879	rpusd4	92	51.020	ENSHGLG00000002285	RPUSD4	89	51.020	Heterocephalus_glaber_female
ENSONIG00000018879	rpusd4	92	51.020	ENSHGLG00100006385	RPUSD4	89	51.020	Heterocephalus_glaber_male
ENSONIG00000018879	rpusd4	99	67.876	ENSHCOG00000006612	rpusd4	98	67.876	Hippocampus_comes
ENSONIG00000018879	rpusd4	88	60.550	ENSIPUG00000023879	rusd4	90	58.166	Ictalurus_punctatus
ENSONIG00000018879	rpusd4	91	52.212	ENSSTOG00000025280	RPUSD4	91	52.212	Ictidomys_tridecemlineatus
ENSONIG00000018879	rpusd4	96	50.838	ENSJJAG00000018673	Rpusd4	95	50.838	Jaculus_jaculus
ENSONIG00000018879	rpusd4	99	71.795	ENSKMAG00000021805	rpusd4	99	71.795	Kryptolebias_marmoratus
ENSONIG00000018879	rpusd4	90	78.012	ENSLBEG00000020394	rpusd4	93	78.012	Labrus_bergylta
ENSONIG00000018879	rpusd4	88	52.308	ENSLACG00000011028	RPUSD4	91	48.619	Latimeria_chalumnae
ENSONIG00000018879	rpusd4	89	46.567	ENSLOCG00000003124	rpusd4	92	45.845	Lepisosteus_oculatus
ENSONIG00000018879	rpusd4	94	51.420	ENSLAFG00000005211	RPUSD4	100	45.424	Loxodonta_africana
ENSONIG00000018879	rpusd4	92	49.271	ENSMFAG00000039513	RPUSD4	89	49.271	Macaca_fascicularis
ENSONIG00000018879	rpusd4	92	48.980	ENSMMUG00000007933	RPUSD4	89	48.980	Macaca_mulatta
ENSONIG00000018879	rpusd4	92	49.563	ENSMNEG00000027414	RPUSD4	89	49.563	Macaca_nemestrina
ENSONIG00000018879	rpusd4	91	49.412	ENSMLEG00000042461	RPUSD4	88	49.412	Mandrillus_leucophaeus
ENSONIG00000018879	rpusd4	99	70.127	ENSMAMG00000023839	rpusd4	99	70.127	Mastacembelus_armatus
ENSONIG00000018879	rpusd4	100	96.641	ENSMZEG00005011999	rpusd4	100	96.641	Maylandia_zebra
ENSONIG00000018879	rpusd4	76	53.684	ENSMGAG00000000840	RPUSD4	99	50.760	Meleagris_gallopavo
ENSONIG00000018879	rpusd4	94	50.852	ENSMAUG00000010280	Rpusd4	92	50.852	Mesocricetus_auratus
ENSONIG00000018879	rpusd4	93	50.000	ENSMICG00000015979	RPUSD4	89	53.974	Microcebus_murinus
ENSONIG00000018879	rpusd4	96	49.167	ENSMOCG00000000661	Rpusd4	94	49.167	Microtus_ochrogaster
ENSONIG00000018879	rpusd4	85	78.457	ENSMMOG00000021731	rpusd4	93	78.457	Mola_mola
ENSONIG00000018879	rpusd4	90	54.734	ENSMODG00000004521	RPUSD4	85	54.734	Monodelphis_domestica
ENSONIG00000018879	rpusd4	83	82.026	ENSMALG00000005839	rpusd4	95	80.831	Monopterus_albus
ENSONIG00000018879	rpusd4	96	51.389	MGP_CAROLIEiJ_G0031954	Rpusd4	94	51.389	Mus_caroli
ENSONIG00000018879	rpusd4	96	51.944	ENSMUSG00000032044	Rpusd4	94	51.944	Mus_musculus
ENSONIG00000018879	rpusd4	96	51.253	MGP_PahariEiJ_G0014819	Rpusd4	93	51.253	Mus_pahari
ENSONIG00000018879	rpusd4	96	51.111	MGP_SPRETEiJ_G0033078	Rpusd4	94	51.111	Mus_spretus
ENSONIG00000018879	rpusd4	92	50.729	ENSMPUG00000006608	RPUSD4	89	50.729	Mustela_putorius_furo
ENSONIG00000018879	rpusd4	91	51.765	ENSMLUG00000017328	-	88	51.765	Myotis_lucifugus
ENSONIG00000018879	rpusd4	69	52.326	ENSMLUG00000029348	-	99	52.326	Myotis_lucifugus
ENSONIG00000018879	rpusd4	96	51.944	ENSNGAG00000020847	Rpusd4	94	51.944	Nannospalax_galili
ENSONIG00000018879	rpusd4	92	95.562	ENSNBRG00000005207	rpusd4	98	95.562	Neolamprologus_brichardi
ENSONIG00000018879	rpusd4	98	48.634	ENSNLEG00000007465	RPUSD4	93	48.634	Nomascus_leucogenys
ENSONIG00000018879	rpusd4	90	52.522	ENSMEUG00000004370	RPUSD4	89	52.522	Notamacropus_eugenii
ENSONIG00000018879	rpusd4	96	49.036	ENSODEG00000004577	RPUSD4	95	49.036	Octodon_degus
ENSONIG00000018879	rpusd4	79	50.000	ENSOANG00000007247	RPUSD4	95	49.502	Ornithorhynchus_anatinus
ENSONIG00000018879	rpusd4	92	52.187	ENSOCUG00000017039	RPUSD4	89	52.187	Oryctolagus_cuniculus
ENSONIG00000018879	rpusd4	95	66.762	ENSORLG00000002750	rpusd4	94	70.760	Oryzias_latipes
ENSONIG00000018879	rpusd4	90	70.393	ENSORLG00020002044	rpusd4	89	68.272	Oryzias_latipes_hni
ENSONIG00000018879	rpusd4	90	69.880	ENSORLG00015020034	rpusd4	89	67.797	Oryzias_latipes_hsok
ENSONIG00000018879	rpusd4	90	74.699	ENSOMEG00000004861	rpusd4	88	73.371	Oryzias_melastigma
ENSONIG00000018879	rpusd4	87	53.374	ENSOGAG00000008922	RPUSD4	89	52.187	Otolemur_garnettii
ENSONIG00000018879	rpusd4	91	50.737	ENSOARG00000012238	RPUSD4	88	50.737	Ovis_aries
ENSONIG00000018879	rpusd4	87	52.294	ENSPPAG00000042883	RPUSD4	83	50.872	Pan_paniscus
ENSONIG00000018879	rpusd4	97	49.315	ENSPPRG00000003081	RPUSD4	95	49.315	Panthera_pardus
ENSONIG00000018879	rpusd4	97	49.315	ENSPTIG00000012059	RPUSD4	95	49.315	Panthera_tigris_altaica
ENSONIG00000018879	rpusd4	87	52.294	ENSPTRG00000004454	RPUSD4	89	50.872	Pan_troglodytes
ENSONIG00000018879	rpusd4	92	48.980	ENSPANG00000015040	RPUSD4	89	48.980	Papio_anubis
ENSONIG00000018879	rpusd4	94	55.946	ENSPKIG00000023986	rpusd4	95	55.946	Paramormyrops_kingsleyae
ENSONIG00000018879	rpusd4	80	55.219	ENSPSIG00000014268	RPUSD4	93	55.219	Pelodiscus_sinensis
ENSONIG00000018879	rpusd4	90	70.746	ENSPMGG00000002806	rpusd4	96	67.536	Periophthalmus_magnuspinnatus
ENSONIG00000018879	rpusd4	96	44.444	ENSPEMG00000000278	Rpusd4	93	44.444	Peromyscus_maniculatus_bairdii
ENSONIG00000018879	rpusd4	83	40.533	ENSPMAG00000008183	rpusd4	98	40.533	Petromyzon_marinus
ENSONIG00000018879	rpusd4	93	51.420	ENSPCIG00000010212	RPUSD4	95	51.420	Phascolarctos_cinereus
ENSONIG00000018879	rpusd4	95	72.149	ENSPFOG00000019030	rpusd4	99	72.149	Poecilia_formosa
ENSONIG00000018879	rpusd4	99	71.100	ENSPLAG00000016848	rpusd4	99	71.100	Poecilia_latipinna
ENSONIG00000018879	rpusd4	99	69.309	ENSPMEG00000017534	rpusd4	99	69.309	Poecilia_mexicana
ENSONIG00000018879	rpusd4	97	70.942	ENSPREG00000005689	rpusd4	98	70.942	Poecilia_reticulata
ENSONIG00000018879	rpusd4	92	50.291	ENSPPYG00000004043	RPUSD4	94	49.025	Pongo_abelii
ENSONIG00000018879	rpusd4	72	58.011	ENSPCAG00000000753	RPUSD4	72	58.011	Procavia_capensis
ENSONIG00000018879	rpusd4	92	48.980	ENSPCOG00000020694	RPUSD4	90	48.980	Propithecus_coquereli
ENSONIG00000018879	rpusd4	92	51.312	ENSPVAG00000000988	RPUSD4	94	50.000	Pteropus_vampyrus
ENSONIG00000018879	rpusd4	100	96.382	ENSPNYG00000009652	rpusd4	100	96.382	Pundamilia_nyererei
ENSONIG00000018879	rpusd4	93	60.345	ENSPNAG00000012264	rpusd4	91	60.345	Pygocentrus_nattereri
ENSONIG00000018879	rpusd4	96	51.389	ENSRNOG00000011567	Rpusd4	94	51.389	Rattus_norvegicus
ENSONIG00000018879	rpusd4	96	47.778	ENSRBIG00000034842	RPUSD4	93	47.397	Rhinopithecus_bieti
ENSONIG00000018879	rpusd4	96	47.778	ENSRROG00000039753	RPUSD4	93	47.397	Rhinopithecus_roxellana
ENSONIG00000018879	rpusd4	92	49.271	ENSSBOG00000030413	RPUSD4	90	49.271	Saimiri_boliviensis_boliviensis
ENSONIG00000018879	rpusd4	82	53.947	ENSSHAG00000008304	RPUSD4	99	53.947	Sarcophilus_harrisii
ENSONIG00000018879	rpusd4	90	57.227	ENSSFOG00015006203	rpusd4	91	57.817	Scleropages_formosus
ENSONIG00000018879	rpusd4	99	72.208	ENSSMAG00000020978	rpusd4	99	72.414	Scophthalmus_maximus
ENSONIG00000018879	rpusd4	99	75.130	ENSSDUG00000013399	rpusd4	100	75.130	Seriola_dumerili
ENSONIG00000018879	rpusd4	99	75.648	ENSSLDG00000023507	rpusd4	100	75.648	Seriola_lalandi_dorsalis
ENSONIG00000018879	rpusd4	90	51.320	ENSSPUG00000001401	RPUSD4	93	51.613	Sphenodon_punctatus
ENSONIG00000018879	rpusd4	99	74.935	ENSSPAG00000012163	rpusd4	99	74.935	Stegastes_partitus
ENSONIG00000018879	rpusd4	96	49.307	ENSSSCG00000015233	RPUSD4	95	49.307	Sus_scrofa
ENSONIG00000018879	rpusd4	81	52.333	ENSTGUG00000000773	RPUSD4	99	52.333	Taeniopygia_guttata
ENSONIG00000018879	rpusd4	99	68.734	ENSTRUG00000012283	rpusd4	99	68.734	Takifugu_rubripes
ENSONIG00000018879	rpusd4	99	66.408	ENSTNIG00000014676	rpusd4	99	66.408	Tetraodon_nigroviridis
ENSONIG00000018879	rpusd4	91	50.737	ENSTTRG00000001555	RPUSD4	89	50.737	Tursiops_truncatus
ENSONIG00000018879	rpusd4	92	51.895	ENSUMAG00000002219	RPUSD4	89	51.895	Ursus_maritimus
ENSONIG00000018879	rpusd4	65	49.174	ENSVPAG00000001066	RPUSD4	89	49.174	Vicugna_pacos
ENSONIG00000018879	rpusd4	99	50.404	ENSVVUG00000020101	RPUSD4	96	50.943	Vulpes_vulpes
ENSONIG00000018879	rpusd4	99	70.663	ENSXCOG00000004676	rpusd4	99	70.663	Xiphophorus_couchianus
ENSONIG00000018879	rpusd4	99	70.663	ENSXMAG00000023351	rpusd4	99	70.663	Xiphophorus_maculatus