EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSONIG00000019434 (Gene tree)
Gene ID: 100707310
Gene Symbol: alyref
Alias: -
Full Name: Aly/REF export factor
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Minus strand
Length: 4261 bases
Position: chrGL831278.1:551548-555808
Accession: 100707310
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000024463	RRM_1	PF00076.22	1.1e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000024484	-	2481	-	ENSONIP00000024463	278 (aa)	XP_003454070	I3KTL7

Gene Model

Click here to download ENSONIG00000019434's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000019434's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSONIG00000019434	alyref	100	56.738	ENSONIG00000003296	-	100	55.674

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000019434	alyref	100	52.482	ENSAPOG00000000183	-	100	50.709	Acanthochromis_polyacanthus
ENSONIG00000019434	alyref	100	51.748	ENSACIG00000020351	-	100	52.098	Amphilophus_citrinellus
ENSONIG00000019434	alyref	99	87.273	ENSACIG00000006351	alyref	98	84.116	Amphilophus_citrinellus
ENSONIG00000019434	alyref	100	94.604	ENSAOCG00000014012	alyref	100	94.604	Amphiprion_ocellaris
ENSONIG00000019434	alyref	100	50.355	ENSAOCG00000019305	-	100	49.823	Amphiprion_ocellaris
ENSONIG00000019434	alyref	100	94.604	ENSAPEG00000014603	alyref	100	94.604	Amphiprion_percula
ENSONIG00000019434	alyref	100	52.143	ENSAPEG00000013527	-	100	49.823	Amphiprion_percula
ENSONIG00000019434	alyref	100	86.331	ENSATEG00000004307	alyref	100	86.331	Anabas_testudineus
ENSONIG00000019434	alyref	100	55.477	ENSATEG00000000382	-	100	52.817	Anabas_testudineus
ENSONIG00000019434	alyref	51	73.759	ENSAPLG00000014745	-	100	73.611	Anas_platyrhynchos
ENSONIG00000019434	alyref	100	97.482	ENSACLG00000008432	alyref	100	97.482	Astatotilapia_calliptera
ENSONIG00000019434	alyref	100	53.497	ENSACLG00000010184	-	100	52.448	Astatotilapia_calliptera
ENSONIG00000019434	alyref	100	71.831	ENSAMXG00000007359	alyref	100	72.183	Astyanax_mexicanus
ENSONIG00000019434	alyref	99	47.500	ENSCING00000013568	-	99	44.983	Ciona_intestinalis
ENSONIG00000019434	alyref	99	44.643	ENSCSAVG00000003324	-	99	42.652	Ciona_savignyi
ENSONIG00000019434	alyref	100	82.734	ENSCSEG00000017800	alyref	100	84.532	Cynoglossus_semilaevis
ENSONIG00000019434	alyref	100	82.374	ENSCVAG00000014869	alyref	100	80.935	Cyprinodon_variegatus
ENSONIG00000019434	alyref	100	48.929	ENSCVAG00000007789	-	100	44.718	Cyprinodon_variegatus
ENSONIG00000019434	alyref	100	80.769	ENSDARG00000077732	alyref	100	75.524	Danio_rerio
ENSONIG00000019434	alyref	97	45.862	FBgn0010774	Ref1	73	45.238	Drosophila_melanogaster
ENSONIG00000019434	alyref	99	51.636	ENSEBUG00000008253	alyref	95	49.091	Eptatretus_burgeri
ENSONIG00000019434	alyref	72	47.087	ENSEBUG00000006305	alyref	100	39.236	Eptatretus_burgeri
ENSONIG00000019434	alyref	100	73.571	ENSELUG00000017178	alyref	100	70.463	Esox_lucius
ENSONIG00000019434	alyref	100	67.376	ENSELUG00000008849	-	100	64.413	Esox_lucius
ENSONIG00000019434	alyref	59	77.246	ENSFALG00000011923	-	96	70.625	Ficedula_albicollis
ENSONIG00000019434	alyref	100	80.935	ENSFHEG00000019426	alyref	100	78.417	Fundulus_heteroclitus
ENSONIG00000019434	alyref	100	46.429	ENSFHEG00000004698	-	100	45.000	Fundulus_heteroclitus
ENSONIG00000019434	alyref	69	58.333	ENSGMOG00000013122	-	100	57.812	Gadus_morhua
ENSONIG00000019434	alyref	100	68.929	ENSGMOG00000009882	alyref	100	66.786	Gadus_morhua
ENSONIG00000019434	alyref	100	82.500	ENSGAFG00000006014	alyref	100	78.571	Gambusia_affinis
ENSONIG00000019434	alyref	100	45.263	ENSGAFG00000007573	-	100	43.929	Gambusia_affinis
ENSONIG00000019434	alyref	100	55.052	ENSHBUG00000001454	-	100	53.497	Haplochromis_burtoni
ENSONIG00000019434	alyref	100	97.482	ENSHBUG00000020196	alyref	100	97.482	Haplochromis_burtoni
ENSONIG00000019434	alyref	98	47.810	ENSHCOG00000012825	-	94	47.080	Hippocampus_comes
ENSONIG00000019434	alyref	100	74.823	ENSIPUG00000009469	alyref	100	75.532	Ictalurus_punctatus
ENSONIG00000019434	alyref	75	63.981	ENSSTOG00000016570	-	100	60.377	Ictidomys_tridecemlineatus
ENSONIG00000019434	alyref	100	81.362	ENSKMAG00000008912	alyref	100	83.154	Kryptolebias_marmoratus
ENSONIG00000019434	alyref	100	51.049	ENSKMAG00000006462	-	98	49.275	Kryptolebias_marmoratus
ENSONIG00000019434	alyref	99	48.227	ENSLBEG00000012930	-	99	47.687	Labrus_bergylta
ENSONIG00000019434	alyref	100	82.918	ENSLBEG00000023118	alyref	90	81.139	Labrus_bergylta
ENSONIG00000019434	alyref	100	49.329	ENSLBEG00000005387	-	100	48.966	Labrus_bergylta
ENSONIG00000019434	alyref	78	72.273	ENSLOCG00000013879	alyref	89	71.364	Lepisosteus_oculatus
ENSONIG00000019434	alyref	100	84.892	ENSMAMG00000003034	alyref	100	81.655	Mastacembelus_armatus
ENSONIG00000019434	alyref	100	50.714	ENSMAMG00000005464	-	100	48.582	Mastacembelus_armatus
ENSONIG00000019434	alyref	100	97.482	ENSMZEG00005008639	alyref	100	97.482	Maylandia_zebra
ENSONIG00000019434	alyref	100	52.797	ENSMZEG00005012096	-	100	52.098	Maylandia_zebra
ENSONIG00000019434	alyref	99	45.848	ENSMMOG00000007032	-	98	42.955	Mola_mola
ENSONIG00000019434	alyref	99	83.636	ENSMMOG00000012458	alyref	97	78.058	Mola_mola
ENSONIG00000019434	alyref	100	51.399	ENSMALG00000006054	-	100	48.432	Monopterus_albus
ENSONIG00000019434	alyref	100	55.369	ENSMLUG00000014372	-	100	56.794	Myotis_lucifugus
ENSONIG00000019434	alyref	98	57.455	ENSMLUG00000022178	-	98	53.818	Myotis_lucifugus
ENSONIG00000019434	alyref	98	54.965	ENSMLUG00000028605	-	98	56.028	Myotis_lucifugus
ENSONIG00000019434	alyref	98	56.786	ENSMLUG00000030671	-	99	52.817	Myotis_lucifugus
ENSONIG00000019434	alyref	100	57.143	ENSMLUG00000006521	-	100	56.098	Myotis_lucifugus
ENSONIG00000019434	alyref	98	54.212	ENSMLUG00000009247	-	98	52.015	Myotis_lucifugus
ENSONIG00000019434	alyref	100	58.537	ENSMLUG00000004098	-	100	55.749	Myotis_lucifugus
ENSONIG00000019434	alyref	98	55.363	ENSMLUG00000022467	-	98	53.047	Myotis_lucifugus
ENSONIG00000019434	alyref	100	67.986	ENSNGAG00000022014	-	100	62.230	Nannospalax_galili
ENSONIG00000019434	alyref	100	54.225	ENSNBRG00000017460	-	100	53.169	Neolamprologus_brichardi
ENSONIG00000019434	alyref	100	98.921	ENSNBRG00000001747	alyref	100	98.921	Neolamprologus_brichardi
ENSONIG00000019434	alyref	99	40.764	ENSORLG00000001620	-	58	46.262	Oryzias_latipes
ENSONIG00000019434	alyref	100	48.582	ENSORLG00020015673	-	99	45.907	Oryzias_latipes_hni
ENSONIG00000019434	alyref	100	85.252	ENSORLG00020011942	alyref	100	82.014	Oryzias_latipes_hni
ENSONIG00000019434	alyref	100	84.173	ENSORLG00015022664	alyref	100	79.496	Oryzias_latipes_hsok
ENSONIG00000019434	alyref	100	48.214	ENSORLG00015015143	-	99	46.263	Oryzias_latipes_hsok
ENSONIG00000019434	alyref	99	48.014	ENSOMEG00000007158	-	97	43.416	Oryzias_melastigma
ENSONIG00000019434	alyref	100	83.453	ENSOMEG00000019176	alyref	100	79.496	Oryzias_melastigma
ENSONIG00000019434	alyref	69	76.684	ENSPPAG00000036403	-	68	69.948	Pan_paniscus
ENSONIG00000019434	alyref	100	74.552	ENSPKIG00000007070	alyref	100	71.685	Paramormyrops_kingsleyae
ENSONIG00000019434	alyref	99	70.504	ENSPKIG00000006233	-	81	62.724	Paramormyrops_kingsleyae
ENSONIG00000019434	alyref	71	47.980	ENSPMGG00000012994	-	97	45.685	Periophthalmus_magnuspinnatus
ENSONIG00000019434	alyref	99	79.636	ENSPMGG00000016600	alyref	91	80.935	Periophthalmus_magnuspinnatus
ENSONIG00000019434	alyref	100	63.669	ENSPEMG00000016628	-	79	70.051	Peromyscus_maniculatus_bairdii
ENSONIG00000019434	alyref	100	80.071	ENSPFOG00000022825	alyref	99	78.292	Poecilia_formosa
ENSONIG00000019434	alyref	100	46.667	ENSPFOG00000017094	-	100	43.571	Poecilia_formosa
ENSONIG00000019434	alyref	100	46.667	ENSPLAG00000014380	-	100	43.571	Poecilia_latipinna
ENSONIG00000019434	alyref	100	80.000	ENSPLAG00000006948	alyref	100	78.571	Poecilia_latipinna
ENSONIG00000019434	alyref	100	46.667	ENSPMEG00000023039	-	100	43.571	Poecilia_mexicana
ENSONIG00000019434	alyref	100	80.071	ENSPMEG00000003547	alyref	100	78.292	Poecilia_mexicana
ENSONIG00000019434	alyref	100	80.357	ENSPREG00000015795	alyref	100	78.929	Poecilia_reticulata
ENSONIG00000019434	alyref	100	48.043	ENSPREG00000003649	-	100	44.604	Poecilia_reticulata
ENSONIG00000019434	alyref	99	51.773	ENSPNYG00000002879	-	98	50.534	Pundamilia_nyererei
ENSONIG00000019434	alyref	100	97.482	ENSPNYG00000017498	alyref	100	97.482	Pundamilia_nyererei
ENSONIG00000019434	alyref	100	76.786	ENSPNAG00000002531	alyref	100	72.500	Pygocentrus_nattereri
ENSONIG00000019434	alyref	80	70.742	ENSSBOG00000030924	-	87	68.812	Saimiri_boliviensis_boliviensis
ENSONIG00000019434	alyref	99	54.676	ENSSHAG00000012866	-	99	52.878	Sarcophilus_harrisii
ENSONIG00000019434	alyref	99	56.338	ENSSHAG00000000609	-	99	53.597	Sarcophilus_harrisii
ENSONIG00000019434	alyref	70	74.359	ENSSFOG00015003678	alyref	83	69.744	Scleropages_formosus
ENSONIG00000019434	alyref	78	78.802	ENSSFOG00015003923	alyref	73	73.272	Scleropages_formosus
ENSONIG00000019434	alyref	100	50.699	ENSSMAG00000011169	-	100	52.239	Scophthalmus_maximus
ENSONIG00000019434	alyref	100	79.928	ENSSMAG00000009283	alyref	100	80.287	Scophthalmus_maximus
ENSONIG00000019434	alyref	100	90.288	ENSSDUG00000016158	alyref	100	88.489	Seriola_dumerili
ENSONIG00000019434	alyref	100	85.252	ENSSLDG00000017803	alyref	100	83.453	Seriola_lalandi_dorsalis
ENSONIG00000019434	alyref	99	52.500	ENSSPAG00000017028	-	96	50.714	Stegastes_partitus
ENSONIG00000019434	alyref	100	48.780	ENSTRUG00000003051	-	100	48.936	Takifugu_rubripes
ENSONIG00000019434	alyref	100	49.645	ENSTNIG00000014136	-	100	44.484	Tetraodon_nigroviridis
ENSONIG00000019434	alyref	100	74.113	ENSTNIG00000011595	alyref	100	69.149	Tetraodon_nigroviridis
ENSONIG00000019434	alyref	71	78.173	ENSVVUG00000000272	-	82	72.449	Vulpes_vulpes
ENSONIG00000019434	alyref	99	81.588	ENSXCOG00000018047	alyref	99	76.786	Xiphophorus_couchianus
ENSONIG00000019434	alyref	99	81.588	ENSXMAG00000012218	alyref	99	76.786	Xiphophorus_maculatus
ENSONIG00000019434	alyref	100	47.703	ENSXMAG00000018086	-	100	44.643	Xiphophorus_maculatus