EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSONIG00000019452 (Gene tree)
Gene ID: 100700987
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Plus strand
Length: 21617 bases
Position: chrGL831146.1:6975354-6996970
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000024487	RRM_1	PF00076.22	1.9e-33	1	2
ENSONIP00000024487	RRM_1	PF00076.22	1.9e-33	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000024508	-	1095	-	ENSONIP00000024487	364 (aa)	-	I3KTP1

Gene Model

Click here to download ENSONIG00000019452's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000019452's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSONIG00000019452	-	52	43.684	ENSONIG00000013237	-	84	37.226
ENSONIG00000019452	-	52	76.316	ENSONIG00000001972	msi2a	84	76.316
ENSONIG00000019452	-	51	40.642	ENSONIG00000008607	hnrnpa3	55	37.826
ENSONIG00000019452	-	81	30.208	ENSONIG00000017073	rbm38	85	30.208
ENSONIG00000019452	-	52	46.032	ENSONIG00000012982	hnrnpaba	82	38.163
ENSONIG00000019452	-	100	89.286	ENSONIG00000011182	MSI1	100	89.286
ENSONIG00000019452	-	55	44.000	ENSONIG00000015390	hnrnpd	79	39.683

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000019452	-	100	83.516	ENSG00000135097	MSI1	100	83.516	Homo_sapiens
ENSONIG00000019452	-	100	94.780	ENSAPOG00000003191	MSI1	100	94.780	Acanthochromis_polyacanthus
ENSONIG00000019452	-	100	89.560	ENSAPOG00000023458	-	100	89.560	Acanthochromis_polyacanthus
ENSONIG00000019452	-	94	69.452	ENSAMEG00000013302	MSI1	100	69.452	Ailuropoda_melanoleuca
ENSONIG00000019452	-	90	91.489	ENSACIG00000017754	-	78	91.489	Amphilophus_citrinellus
ENSONIG00000019452	-	100	94.780	ENSAOCG00000003804	MSI1	100	94.780	Amphiprion_ocellaris
ENSONIG00000019452	-	94	79.825	ENSAOCG00000009031	-	95	80.409	Amphiprion_ocellaris
ENSONIG00000019452	-	100	89.560	ENSAPEG00000006857	-	84	89.560	Amphiprion_percula
ENSONIG00000019452	-	100	94.780	ENSAPEG00000003245	MSI1	100	94.780	Amphiprion_percula
ENSONIG00000019452	-	100	87.705	ENSATEG00000023779	-	100	87.705	Anabas_testudineus
ENSONIG00000019452	-	100	85.405	ENSATEG00000017059	MSI1	100	85.405	Anabas_testudineus
ENSONIG00000019452	-	100	84.066	ENSACAG00000002762	MSI1	100	84.066	Anolis_carolinensis
ENSONIG00000019452	-	100	83.516	ENSANAG00000027151	MSI1	100	83.516	Aotus_nancymaae
ENSONIG00000019452	-	79	83.624	ENSANAG00000027901	-	88	83.624	Aotus_nancymaae
ENSONIG00000019452	-	100	89.286	ENSACLG00000000117	-	100	90.029	Astatotilapia_calliptera
ENSONIG00000019452	-	100	96.154	ENSACLG00000011230	MSI1	100	96.154	Astatotilapia_calliptera
ENSONIG00000019452	-	94	86.747	ENSAMXG00000038960	msi1	76	86.747	Astyanax_mexicanus
ENSONIG00000019452	-	100	83.516	ENSBTAG00000009800	MSI1	100	85.630	Bos_taurus
ENSONIG00000019452	-	100	83.516	ENSCJAG00000008578	MSI1	100	83.516	Callithrix_jacchus
ENSONIG00000019452	-	100	83.242	ENSCAFG00000010283	MSI1	100	83.242	Canis_familiaris
ENSONIG00000019452	-	94	85.531	ENSCAFG00020020585	MSI1	100	85.531	Canis_lupus_dingo
ENSONIG00000019452	-	100	82.114	ENSCHIG00000024304	MSI1	100	82.114	Capra_hircus
ENSONIG00000019452	-	94	85.015	ENSTSYG00000033949	MSI1	95	85.015	Carlito_syrichta
ENSONIG00000019452	-	94	85.714	ENSCAPG00000003919	MSI1	78	85.714	Cavia_aperea
ENSONIG00000019452	-	95	85.465	ENSCPOG00000012361	MSI1	100	85.673	Cavia_porcellus
ENSONIG00000019452	-	100	83.516	ENSCCAG00000035567	MSI1	100	83.516	Cebus_capucinus
ENSONIG00000019452	-	100	83.516	ENSCATG00000030019	MSI1	100	83.516	Cercocebus_atys
ENSONIG00000019452	-	94	85.673	ENSCLAG00000011329	MSI1	100	85.673	Chinchilla_lanigera
ENSONIG00000019452	-	75	81.720	ENSCSAG00000002265	MSI1	96	81.720	Chlorocebus_sabaeus
ENSONIG00000019452	-	100	84.066	ENSCPBG00000011349	MSI1	100	84.066	Chrysemys_picta_bellii
ENSONIG00000019452	-	94	85.061	ENSCANG00000040651	MSI1	100	85.061	Colobus_angolensis_palliatus
ENSONIG00000019452	-	100	83.516	ENSCGRG00001018883	Msi1	100	83.516	Cricetulus_griseus_chok1gshd
ENSONIG00000019452	-	94	85.106	ENSCGRG00000002191	Msi1	72	85.106	Cricetulus_griseus_crigri
ENSONIG00000019452	-	94	80.645	ENSCSEG00000011032	MSI1	100	80.645	Cynoglossus_semilaevis
ENSONIG00000019452	-	100	94.231	ENSCSEG00000005834	-	100	94.231	Cynoglossus_semilaevis
ENSONIG00000019452	-	100	87.363	ENSCSEG00000008352	-	100	87.363	Cynoglossus_semilaevis
ENSONIG00000019452	-	100	89.560	ENSCVAG00000009100	MSI1	100	89.560	Cyprinodon_variegatus
ENSONIG00000019452	-	77	74.892	ENSCVAG00000017463	-	89	74.892	Cyprinodon_variegatus
ENSONIG00000019452	-	80	85.590	ENSDARG00000102015	CABZ01037298.1	98	85.590	Danio_rerio
ENSONIG00000019452	-	94	82.012	ENSDARG00000010710	msi1	100	87.665	Danio_rerio
ENSONIG00000019452	-	94	78.788	ENSDNOG00000005713	MSI1	91	78.788	Dasypus_novemcinctus
ENSONIG00000019452	-	94	84.431	ENSDORG00000005610	Msi1	94	84.431	Dipodomys_ordii
ENSONIG00000019452	-	94	81.402	ENSETEG00000004756	MSI1	100	81.402	Echinops_telfairi
ENSONIG00000019452	-	100	83.516	ENSEASG00005004736	MSI1	100	83.516	Equus_asinus_asinus
ENSONIG00000019452	-	100	83.516	ENSECAG00000017526	MSI1	100	83.516	Equus_caballus
ENSONIG00000019452	-	94	83.871	ENSELUG00000023280	-	100	83.578	Esox_lucius
ENSONIG00000019452	-	94	83.425	ENSELUG00000023219	MSI1	92	83.425	Esox_lucius
ENSONIG00000019452	-	100	83.516	ENSFCAG00000011007	MSI1	100	83.516	Felis_catus
ENSONIG00000019452	-	94	85.852	ENSFALG00000007574	MSI1	100	85.852	Ficedula_albicollis
ENSONIG00000019452	-	94	84.756	ENSFDAG00000019586	MSI1	100	84.756	Fukomys_damarensis
ENSONIG00000019452	-	100	94.231	ENSFHEG00000003560	-	100	94.231	Fundulus_heteroclitus
ENSONIG00000019452	-	100	89.835	ENSFHEG00000022446	MSI1	100	89.835	Fundulus_heteroclitus
ENSONIG00000019452	-	100	87.088	ENSGMOG00000001006	MSI1	99	86.813	Gadus_morhua
ENSONIG00000019452	-	100	84.066	ENSGMOG00000017838	-	100	84.066	Gadus_morhua
ENSONIG00000019452	-	94	86.081	ENSGALG00000007227	MSI1	98	76.336	Gallus_gallus
ENSONIG00000019452	-	94	93.275	ENSGAFG00000021522	MSI1	94	93.275	Gambusia_affinis
ENSONIG00000019452	-	100	68.120	ENSGAFG00000005860	-	100	68.120	Gambusia_affinis
ENSONIG00000019452	-	100	87.912	ENSGACG00000012679	MSI1	100	87.912	Gasterosteus_aculeatus
ENSONIG00000019452	-	100	88.187	ENSGACG00000008674	-	100	88.187	Gasterosteus_aculeatus
ENSONIG00000019452	-	100	83.791	ENSGAGG00000016037	MSI1	100	83.791	Gopherus_agassizii
ENSONIG00000019452	-	94	85.350	ENSGGOG00000010328	MSI1	100	85.350	Gorilla_gorilla
ENSONIG00000019452	-	100	89.286	ENSHBUG00000011841	-	100	89.286	Haplochromis_burtoni
ENSONIG00000019452	-	100	96.154	ENSHBUG00000021921	MSI1	100	96.154	Haplochromis_burtoni
ENSONIG00000019452	-	100	83.242	ENSHGLG00000012782	MSI1	100	83.242	Heterocephalus_glaber_female
ENSONIG00000019452	-	94	84.756	ENSHGLG00100016848	MSI1	100	84.756	Heterocephalus_glaber_male
ENSONIG00000019452	-	100	84.511	ENSHCOG00000012067	-	100	84.511	Hippocampus_comes
ENSONIG00000019452	-	90	91.463	ENSHCOG00000012019	MSI1	100	86.510	Hippocampus_comes
ENSONIG00000019452	-	100	85.714	ENSIPUG00000001976	msi1	100	85.714	Ictalurus_punctatus
ENSONIG00000019452	-	94	85.531	ENSSTOG00000009799	MSI1	100	85.531	Ictidomys_tridecemlineatus
ENSONIG00000019452	-	100	83.516	ENSJJAG00000010463	Msi1	100	83.516	Jaculus_jaculus
ENSONIG00000019452	-	100	70.879	ENSJJAG00000010643	-	100	70.330	Jaculus_jaculus
ENSONIG00000019452	-	100	89.011	ENSKMAG00000011251	MSI1	100	89.011	Kryptolebias_marmoratus
ENSONIG00000019452	-	94	87.683	ENSKMAG00000019877	-	100	87.683	Kryptolebias_marmoratus
ENSONIG00000019452	-	100	89.835	ENSLBEG00000008789	MSI1	100	89.835	Labrus_bergylta
ENSONIG00000019452	-	100	95.330	ENSLBEG00000001375	-	100	95.330	Labrus_bergylta
ENSONIG00000019452	-	94	84.884	ENSLACG00000018287	MSI1	100	84.884	Latimeria_chalumnae
ENSONIG00000019452	-	50	76.786	ENSLOCG00000008618	zgc:110796	71	76.786	Lepisosteus_oculatus
ENSONIG00000019452	-	90	76.133	ENSLAFG00000009412	MSI1	100	76.133	Loxodonta_africana
ENSONIG00000019452	-	94	85.673	ENSMFAG00000001798	MSI1	100	85.673	Macaca_fascicularis
ENSONIG00000019452	-	94	85.673	ENSMMUG00000031527	MSI1	96	84.770	Macaca_mulatta
ENSONIG00000019452	-	100	83.516	ENSMNEG00000040034	MSI1	100	83.516	Macaca_nemestrina
ENSONIG00000019452	-	94	85.061	ENSMLEG00000003921	MSI1	100	85.061	Mandrillus_leucophaeus
ENSONIG00000019452	-	100	88.462	ENSMAMG00000002279	MSI1	100	88.462	Mastacembelus_armatus
ENSONIG00000019452	-	100	93.956	ENSMAMG00000018426	-	100	93.956	Mastacembelus_armatus
ENSONIG00000019452	-	100	89.286	ENSMZEG00005000340	-	100	89.286	Maylandia_zebra
ENSONIG00000019452	-	100	96.154	ENSMZEG00005026892	MSI1	100	96.154	Maylandia_zebra
ENSONIG00000019452	-	60	93.491	ENSMGAG00000016518	-	100	93.491	Meleagris_gallopavo
ENSONIG00000019452	-	66	88.017	ENSMAUG00000016820	Msi1	99	88.017	Mesocricetus_auratus
ENSONIG00000019452	-	100	83.516	ENSMICG00000033181	MSI1	100	83.516	Microcebus_murinus
ENSONIG00000019452	-	100	83.242	ENSMOCG00000002286	Msi1	100	83.242	Microtus_ochrogaster
ENSONIG00000019452	-	94	75.510	ENSMMOG00000010492	MSI1	96	78.363	Mola_mola
ENSONIG00000019452	-	100	82.692	ENSMMOG00000012265	-	100	82.692	Mola_mola
ENSONIG00000019452	-	90	58.735	ENSMODG00000003189	-	100	58.735	Monodelphis_domestica
ENSONIG00000019452	-	100	89.286	ENSMALG00000017889	MSI1	100	89.286	Monopterus_albus
ENSONIG00000019452	-	94	93.548	ENSMALG00000001426	-	100	93.548	Monopterus_albus
ENSONIG00000019452	-	100	82.967	MGP_CAROLIEiJ_G0027626	Msi1	100	82.967	Mus_caroli
ENSONIG00000019452	-	100	82.967	ENSMUSG00000054256	Msi1	99	84.478	Mus_musculus
ENSONIG00000019452	-	100	82.692	MGP_PahariEiJ_G0024206	Msi1	100	82.692	Mus_pahari
ENSONIG00000019452	-	100	82.967	MGP_SPRETEiJ_G0028624	Msi1	100	82.967	Mus_spretus
ENSONIG00000019452	-	94	85.531	ENSMPUG00000003168	MSI1	100	85.531	Mustela_putorius_furo
ENSONIG00000019452	-	94	76.488	ENSMLUG00000010313	MSI1	100	76.488	Myotis_lucifugus
ENSONIG00000019452	-	94	85.106	ENSNGAG00000014508	Msi1	91	85.106	Nannospalax_galili
ENSONIG00000019452	-	88	86.381	ENSNBRG00000018012	MSI1	99	86.381	Neolamprologus_brichardi
ENSONIG00000019452	-	100	89.286	ENSNBRG00000000841	-	100	89.286	Neolamprologus_brichardi
ENSONIG00000019452	-	90	75.610	ENSNLEG00000015636	MSI1	100	75.610	Nomascus_leucogenys
ENSONIG00000019452	-	94	66.463	ENSMEUG00000015759	MSI1	100	66.463	Notamacropus_eugenii
ENSONIG00000019452	-	90	77.778	ENSOPRG00000016879	MSI1	100	77.778	Ochotona_princeps
ENSONIG00000019452	-	94	85.061	ENSODEG00000006328	MSI1	100	85.061	Octodon_degus
ENSONIG00000019452	-	94	85.852	ENSOCUG00000027716	MSI1	100	85.852	Oryctolagus_cuniculus
ENSONIG00000019452	-	100	93.132	ENSORLG00000029593	MSI1	100	93.132	Oryzias_latipes
ENSONIG00000019452	-	100	89.286	ENSORLG00000019978	-	100	89.286	Oryzias_latipes
ENSONIG00000019452	-	100	89.286	ENSORLG00020001208	-	71	89.286	Oryzias_latipes_hni
ENSONIG00000019452	-	100	93.132	ENSORLG00020008266	MSI1	99	87.719	Oryzias_latipes_hni
ENSONIG00000019452	-	100	93.132	ENSORLG00015003916	MSI1	100	93.132	Oryzias_latipes_hsok
ENSONIG00000019452	-	100	89.286	ENSORLG00015013672	-	76	84.615	Oryzias_latipes_hsok
ENSONIG00000019452	-	100	93.407	ENSOMEG00000002272	-	100	93.407	Oryzias_melastigma
ENSONIG00000019452	-	100	89.560	ENSOMEG00000017536	MSI1	100	89.560	Oryzias_melastigma
ENSONIG00000019452	-	99	82.143	ENSOGAG00000003847	MSI1	99	82.143	Otolemur_garnettii
ENSONIG00000019452	-	94	82.424	ENSOARG00000012097	MSI1	100	82.424	Ovis_aries
ENSONIG00000019452	-	94	85.061	ENSPPAG00000043073	MSI1	100	85.061	Pan_paniscus
ENSONIG00000019452	-	100	83.516	ENSPPRG00000000370	MSI1	100	83.516	Panthera_pardus
ENSONIG00000019452	-	94	85.531	ENSPTIG00000008913	MSI1	100	85.531	Panthera_tigris_altaica
ENSONIG00000019452	-	100	83.516	ENSPTRG00000005531	MSI1	100	83.516	Pan_troglodytes
ENSONIG00000019452	-	100	83.242	ENSPANG00000006335	MSI1	100	83.242	Papio_anubis
ENSONIG00000019452	-	100	90.385	ENSPKIG00000016497	MSI1	100	90.385	Paramormyrops_kingsleyae
ENSONIG00000019452	-	100	87.363	ENSPKIG00000023575	-	100	87.363	Paramormyrops_kingsleyae
ENSONIG00000019452	-	94	81.871	ENSPSIG00000011608	-	93	81.871	Pelodiscus_sinensis
ENSONIG00000019452	-	80	81.659	ENSPSIG00000009621	-	100	81.659	Pelodiscus_sinensis
ENSONIG00000019452	-	90	84.195	ENSPMGG00000000514	MSI1	97	84.195	Periophthalmus_magnuspinnatus
ENSONIG00000019452	-	94	72.384	ENSPMGG00000007743	-	98	67.403	Periophthalmus_magnuspinnatus
ENSONIG00000019452	-	94	83.680	ENSPEMG00000010491	Msi1	95	83.680	Peromyscus_maniculatus_bairdii
ENSONIG00000019452	-	100	89.560	ENSPFOG00000013113	MSI1	100	89.560	Poecilia_formosa
ENSONIG00000019452	-	100	94.231	ENSPFOG00000008319	-	86	94.231	Poecilia_formosa
ENSONIG00000019452	-	100	89.560	ENSPLAG00000014025	-	100	89.560	Poecilia_latipinna
ENSONIG00000019452	-	100	94.231	ENSPLAG00000012431	-	97	94.231	Poecilia_latipinna
ENSONIG00000019452	-	100	89.560	ENSPMEG00000012796	MSI1	100	89.560	Poecilia_mexicana
ENSONIG00000019452	-	100	93.681	ENSPMEG00000007025	-	86	93.681	Poecilia_mexicana
ENSONIG00000019452	-	98	84.034	ENSPREG00000021416	-	98	84.034	Poecilia_reticulata
ENSONIG00000019452	-	77	81.250	ENSPREG00000014574	-	100	81.250	Poecilia_reticulata
ENSONIG00000019452	-	100	82.692	ENSPPYG00000005027	MSI1	100	82.692	Pongo_abelii
ENSONIG00000019452	-	94	69.231	ENSPCAG00000002300	MSI1	100	69.231	Procavia_capensis
ENSONIG00000019452	-	100	83.516	ENSPCOG00000017341	MSI1	100	83.516	Propithecus_coquereli
ENSONIG00000019452	-	94	68.902	ENSPVAG00000002225	MSI1	100	68.902	Pteropus_vampyrus
ENSONIG00000019452	-	100	89.286	ENSPNYG00000002529	-	100	89.286	Pundamilia_nyererei
ENSONIG00000019452	-	100	96.154	ENSPNYG00000004379	MSI1	100	96.154	Pundamilia_nyererei
ENSONIG00000019452	-	100	86.264	ENSPNAG00000019337	msi1	100	86.264	Pygocentrus_nattereri
ENSONIG00000019452	-	94	85.209	ENSRNOG00000001156	Msi1	100	85.209	Rattus_norvegicus
ENSONIG00000019452	-	94	85.531	ENSRBIG00000036889	MSI1	100	85.531	Rhinopithecus_bieti
ENSONIG00000019452	-	94	84.848	ENSRROG00000041076	MSI1	93	84.848	Rhinopithecus_roxellana
ENSONIG00000019452	-	94	85.673	ENSSBOG00000030259	MSI1	99	85.673	Saimiri_boliviensis_boliviensis
ENSONIG00000019452	-	94	75.490	ENSSHAG00000006834	MSI1	100	75.490	Sarcophilus_harrisii
ENSONIG00000019452	-	94	91.813	ENSSFOG00015014964	-	95	91.813	Scleropages_formosus
ENSONIG00000019452	-	94	90.058	ENSSFOG00015005350	MSI1	96	90.058	Scleropages_formosus
ENSONIG00000019452	-	94	92.000	ENSSMAG00000009156	-	73	90.278	Scophthalmus_maximus
ENSONIG00000019452	-	94	84.498	ENSSMAG00000018824	MSI1	97	84.498	Scophthalmus_maximus
ENSONIG00000019452	-	100	95.604	ENSSDUG00000022697	-	100	95.604	Seriola_dumerili
ENSONIG00000019452	-	100	89.560	ENSSDUG00000001027	MSI1	100	89.560	Seriola_dumerili
ENSONIG00000019452	-	100	89.560	ENSSLDG00000016832	MSI1	100	89.560	Seriola_lalandi_dorsalis
ENSONIG00000019452	-	100	83.242	ENSSLDG00000018706	-	100	83.198	Seriola_lalandi_dorsalis
ENSONIG00000019452	-	100	83.791	ENSSPUG00000015741	MSI1	100	83.791	Sphenodon_punctatus
ENSONIG00000019452	-	52	80.247	ENSSPAG00000015573	zgc:110796	82	80.247	Stegastes_partitus
ENSONIG00000019452	-	94	95.308	ENSSPAG00000013098	-	100	95.308	Stegastes_partitus
ENSONIG00000019452	-	77	65.333	ENSSPAG00000014085	-	100	70.089	Stegastes_partitus
ENSONIG00000019452	-	100	83.242	ENSSSCG00000029365	MSI1	100	85.209	Sus_scrofa
ENSONIG00000019452	-	94	86.377	ENSTGUG00000009534	MSI1	100	86.377	Taeniopygia_guttata
ENSONIG00000019452	-	81	86.463	ENSTRUG00000016249	MSI1	100	77.903	Takifugu_rubripes
ENSONIG00000019452	-	94	74.848	ENSTRUG00000015636	-	79	74.242	Takifugu_rubripes
ENSONIG00000019452	-	96	65.659	ENSTNIG00000019814	-	97	65.659	Tetraodon_nigroviridis
ENSONIG00000019452	-	100	84.469	ENSTNIG00000011469	MSI1	100	84.469	Tetraodon_nigroviridis
ENSONIG00000019452	-	94	75.824	ENSTBEG00000007182	MSI1	100	75.824	Tupaia_belangeri
ENSONIG00000019452	-	94	72.222	ENSTTRG00000005663	MSI1	100	72.222	Tursiops_truncatus
ENSONIG00000019452	-	68	87.037	ENSUAMG00000015514	MSI1	94	87.037	Ursus_americanus
ENSONIG00000019452	-	94	82.410	ENSUMAG00000006176	MSI1	88	82.410	Ursus_maritimus
ENSONIG00000019452	-	94	85.106	ENSVVUG00000020993	MSI1	100	84.384	Vulpes_vulpes
ENSONIG00000019452	-	100	81.148	ENSXETG00000012216	msi1	100	81.522	Xenopus_tropicalis
ENSONIG00000019452	-	94	76.316	ENSXCOG00000017605	MSI1	89	76.316	Xiphophorus_couchianus
ENSONIG00000019452	-	100	89.560	ENSXMAG00000027103	MSI1	100	77.898	Xiphophorus_maculatus
ENSONIG00000019452	-	100	93.956	ENSXMAG00000018237	-	100	93.956	Xiphophorus_maculatus