EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSONIG00000019583 (Gene tree)
Gene ID: 100695830
Gene Symbol: srsf5a
Alias: -
Full Name: serine and arginine rich splicing factor 5
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Plus strand
Length: 5415 bases
Position: chrGL831171.1:3906057-3911471
Accession: 100695830
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000024653	RRM_1	PF00076.22	2.5e-33	1	2
ENSONIP00000024653	RRM_1	PF00076.22	2.5e-33	2	2
ENSONIP00000024653	RRM_3	PF08777.11	1.1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000024674	-	2608	-	ENSONIP00000024653	294 (aa)	XP_005477531	I3KU57

Gene Model

Click here to download ENSONIG00000019583's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000019583's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSONIG00000019583	srsf5a	60	43.956	ENSONIG00000004860	-	67	43.407
ENSONIG00000019583	srsf5a	63	63.243	ENSONIG00000013730	srsf4	69	56.786
ENSONIG00000019583	srsf5a	61	41.622	ENSONIG00000013974	srsf9	68	42.703
ENSONIG00000019583	srsf5a	60	41.758	ENSONIG00000013160	-	66	42.857
ENSONIG00000019583	srsf5a	63	63.978	ENSONIG00000020247	-	72	53.125
ENSONIG00000019583	srsf5a	60	47.253	ENSONIG00000004857	-	69	49.451
ENSONIG00000019583	srsf5a	98	54.483	ENSONIG00000001925	-	51	63.243
ENSONIG00000019583	srsf5a	90	58.929	ENSONIG00000005759	srsf5b	63	70.745

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000019583	srsf5a	100	88.372	ENSAPOG00000017395	srsf5a	78	92.827	Acanthochromis_polyacanthus
ENSONIG00000019583	srsf5a	81	92.017	ENSACIG00000011892	srsf5a	96	95.588	Amphilophus_citrinellus
ENSONIG00000019583	srsf5a	81	87.552	ENSAOCG00000014967	srsf5a	80	91.286	Amphiprion_ocellaris
ENSONIG00000019583	srsf5a	81	87.552	ENSAPEG00000009297	srsf5a	80	91.286	Amphiprion_percula
ENSONIG00000019583	srsf5a	91	92.135	ENSATEG00000000198	srsf5a	82	94.515	Anabas_testudineus
ENSONIG00000019583	srsf5a	64	74.346	ENSAPLG00000002469	-	70	73.298	Anas_platyrhynchos
ENSONIG00000019583	srsf5a	64	75.661	ENSACAG00000029015	-	68	74.211	Anolis_carolinensis
ENSONIG00000019583	srsf5a	100	99.324	ENSACLG00000027166	srsf5a	100	99.324	Astatotilapia_calliptera
ENSONIG00000019583	srsf5a	64	85.128	ENSAMXG00000030476	srsf5a	67	84.127	Astyanax_mexicanus
ENSONIG00000019583	srsf5a	64	77.368	ENSCPBG00000021518	-	70	76.316	Chrysemys_picta_bellii
ENSONIG00000019583	srsf5a	64	57.653	ENSCSAVG00000011376	-	78	57.653	Ciona_savignyi
ENSONIG00000019583	srsf5a	81	93.004	ENSCSEG00000008109	srsf5a	77	92.946	Cynoglossus_semilaevis
ENSONIG00000019583	srsf5a	80	83.951	ENSCVAG00000016982	srsf5a	96	83.459	Cyprinodon_variegatus
ENSONIG00000019583	srsf5a	84	71.984	ENSDARG00000029818	srsf5a	100	81.159	Danio_rerio
ENSONIG00000019583	srsf5a	64	76.355	ENSELUG00000020439	srsf5a	62	81.538	Esox_lucius
ENSONIG00000019583	srsf5a	64	74.074	ENSFALG00000005098	-	64	73.545	Ficedula_albicollis
ENSONIG00000019583	srsf5a	82	81.395	ENSFHEG00000003955	srsf5a	97	79.310	Fundulus_heteroclitus
ENSONIG00000019583	srsf5a	64	85.185	ENSGMOG00000000869	srsf5a	94	85.185	Gadus_morhua
ENSONIG00000019583	srsf5a	64	73.545	ENSGALG00000033259	SRSF5A	63	72.487	Gallus_gallus
ENSONIG00000019583	srsf5a	82	72.691	ENSGAFG00000018237	srsf5a	78	61.776	Gambusia_affinis
ENSONIG00000019583	srsf5a	64	77.368	ENSGAGG00000007312	-	70	76.316	Gopherus_agassizii
ENSONIG00000019583	srsf5a	100	99.322	ENSHBUG00000014048	srsf5a	100	99.322	Haplochromis_burtoni
ENSONIG00000019583	srsf5a	64	88.889	ENSHCOG00000017557	srsf5a	62	88.360	Hippocampus_comes
ENSONIG00000019583	srsf5a	64	86.842	ENSIPUG00000003439	srsf5a	69	86.842	Ictalurus_punctatus
ENSONIG00000019583	srsf5a	86	77.736	ENSKMAG00000014937	srsf5a	71	82.845	Kryptolebias_marmoratus
ENSONIG00000019583	srsf5a	64	91.795	ENSLBEG00000017153	srsf5a	74	92.308	Labrus_bergylta
ENSONIG00000019583	srsf5a	64	81.481	ENSLACG00000017874	-	70	79.894	Latimeria_chalumnae
ENSONIG00000019583	srsf5a	64	82.051	ENSLOCG00000014075	srsf5a	61	83.598	Lepisosteus_oculatus
ENSONIG00000019583	srsf5a	100	87.075	ENSMAMG00000000192	srsf5a	82	87.764	Mastacembelus_armatus
ENSONIG00000019583	srsf5a	100	99.661	ENSMZEG00005010485	srsf5a	100	99.661	Maylandia_zebra
ENSONIG00000019583	srsf5a	73	71.296	ENSMGAG00000011888	-	96	72.515	Meleagris_gallopavo
ENSONIG00000019583	srsf5a	100	88.119	ENSMMOG00000009793	srsf5a	78	91.561	Mola_mola
ENSONIG00000019583	srsf5a	100	81.293	ENSMALG00000021194	srsf5a	79	81.013	Monopterus_albus
ENSONIG00000019583	srsf5a	100	100.000	ENSNBRG00000000771	srsf5a	100	100.000	Neolamprologus_brichardi
ENSONIG00000019583	srsf5a	80	86.920	ENSORLG00000009268	srsf5a	83	85.232	Oryzias_latipes
ENSONIG00000019583	srsf5a	80	86.920	ENSORLG00020003281	srsf5	83	85.232	Oryzias_latipes_hni
ENSONIG00000019583	srsf5a	80	86.920	ENSORLG00015023075	srsf5	83	85.232	Oryzias_latipes_hsok
ENSONIG00000019583	srsf5a	80	86.017	ENSOMEG00000000628	srsf5a	83	85.232	Oryzias_melastigma
ENSONIG00000019583	srsf5a	64	82.653	ENSPKIG00000002054	srsf5a	68	84.127	Paramormyrops_kingsleyae
ENSONIG00000019583	srsf5a	64	76.842	ENSPSIG00000008238	-	69	73.684	Pelodiscus_sinensis
ENSONIG00000019583	srsf5a	82	66.932	ENSPMGG00000020125	srsf5a	55	80.423	Periophthalmus_magnuspinnatus
ENSONIG00000019583	srsf5a	82	82.745	ENSPFOG00000022993	srsf5a	78	82.329	Poecilia_formosa
ENSONIG00000019583	srsf5a	82	82.677	ENSPLAG00000005508	srsf5a	77	82.258	Poecilia_latipinna
ENSONIG00000019583	srsf5a	82	83.137	ENSPMEG00000016339	srsf5a	78	82.731	Poecilia_mexicana
ENSONIG00000019583	srsf5a	82	82.812	ENSPREG00000018091	srsf5a	79	82.400	Poecilia_reticulata
ENSONIG00000019583	srsf5a	100	99.661	ENSPNYG00000021245	srsf5a	100	99.661	Pundamilia_nyererei
ENSONIG00000019583	srsf5a	94	63.481	ENSPNAG00000021333	srsf5a	66	84.127	Pygocentrus_nattereri
ENSONIG00000019583	srsf5a	64	82.143	ENSSFOG00015008377	srsf5	66	84.656	Scleropages_formosus
ENSONIG00000019583	srsf5a	100	82.258	ENSSMAG00000010899	srsf5a	83	87.747	Scophthalmus_maximus
ENSONIG00000019583	srsf5a	91	88.476	ENSSDUG00000006103	srsf5a	80	91.561	Seriola_dumerili
ENSONIG00000019583	srsf5a	100	88.552	ENSSLDG00000004146	srsf5a	79	91.983	Seriola_lalandi_dorsalis
ENSONIG00000019583	srsf5a	64	73.158	ENSSPUG00000002052	-	68	72.105	Sphenodon_punctatus
ENSONIG00000019583	srsf5a	81	91.561	ENSSPAG00000002821	srsf5a	80	91.983	Stegastes_partitus
ENSONIG00000019583	srsf5a	64	74.603	ENSTGUG00000011492	-	68	71.958	Taeniopygia_guttata
ENSONIG00000019583	srsf5a	100	90.909	ENSTRUG00000022908	srsf5a	81	92.500	Takifugu_rubripes
ENSONIG00000019583	srsf5a	99	62.290	ENSXETG00000017937	srsf5a	72	79.474	Xenopus_tropicalis
ENSONIG00000019583	srsf5a	82	82.072	ENSXCOG00000015338	srsf5a	78	82.857	Xiphophorus_couchianus
ENSONIG00000019583	srsf5a	82	83.137	ENSXMAG00000012823	srsf5a	61	88.083	Xiphophorus_maculatus