EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSONIG00000019627 (Gene tree)
Gene ID: 100693928
Gene Symbol: -
Alias: -
Full Name: RNA-binding protein with serine-rich domain 1
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Plus strand
Length: 7481 bases
Position: chrGL831136.1:3098236-3105716
Accession: 100693928
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000024711	RRM_1	PF00076.22	7.1e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000024732	-	1440	-	ENSONIP00000024711	276 (aa)	XP_005448044	I3KUB5

Gene Model

Click here to download ENSONIG00000019627's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000019627's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000019627	-	85	71.784	ENSG00000205937	RNPS1	66	84.706	Homo_sapiens
ENSONIG00000019627	-	83	73.593	ENSAPOG00000017310	RNPS1	74	63.478	Acanthochromis_polyacanthus
ENSONIG00000019627	-	93	96.899	ENSACIG00000020701	RNPS1	99	96.899	Amphilophus_citrinellus
ENSONIG00000019627	-	83	89.035	ENSAPEG00000019263	-	78	78.070	Amphiprion_percula
ENSONIG00000019627	-	83	66.524	ENSATEG00000024267	RNPS1	83	63.203	Anabas_testudineus
ENSONIG00000019627	-	84	52.720	ENSAPLG00000006231	RNPS1	53	77.391	Anas_platyrhynchos
ENSONIG00000019627	-	85	71.369	ENSANAG00000028802	RNPS1	85	64.315	Aotus_nancymaae
ENSONIG00000019627	-	76	69.444	ENSANAG00000029802	-	83	61.111	Aotus_nancymaae
ENSONIG00000019627	-	83	66.667	ENSACLG00000025942	RNPS1	82	62.009	Astatotilapia_calliptera
ENSONIG00000019627	-	88	99.177	ENSACLG00000021537	-	92	99.177	Astatotilapia_calliptera
ENSONIG00000019627	-	83	77.056	ENSAMXG00000006330	-	81	73.500	Astyanax_mexicanus
ENSONIG00000019627	-	76	70.968	ENSBTAG00000009969	RNPS1	71	61.927	Bos_taurus
ENSONIG00000019627	-	85	71.784	ENSCJAG00000014969	RNPS1	90	58.605	Callithrix_jacchus
ENSONIG00000019627	-	84	71.667	ENSCAFG00020026159	RNPS1	86	59.901	Canis_lupus_dingo
ENSONIG00000019627	-	72	69.268	ENSCHIG00000014621	-	69	59.709	Capra_hircus
ENSONIG00000019627	-	85	71.784	ENSTSYG00000001629	RNPS1	55	80.870	Carlito_syrichta
ENSONIG00000019627	-	76	68.807	ENSTSYG00000031848	-	89	59.545	Carlito_syrichta
ENSONIG00000019627	-	85	71.369	ENSCCAG00000034480	RNPS1	78	59.113	Cebus_capucinus
ENSONIG00000019627	-	85	71.784	ENSCATG00000013756	RNPS1	88	58.257	Cercocebus_atys
ENSONIG00000019627	-	95	66.914	ENSCATG00000042361	-	56	77.391	Cercocebus_atys
ENSONIG00000019627	-	85	71.784	ENSCLAG00000015546	RNPS1	78	63.750	Chinchilla_lanigera
ENSONIG00000019627	-	97	72.263	ENSCSAG00000005219	-	81	63.485	Chlorocebus_sabaeus
ENSONIG00000019627	-	84	70.417	ENSCHOG00000004866	RNPS1	78	63.025	Choloepus_hoffmanni
ENSONIG00000019627	-	85	71.784	ENSCANG00000041307	RNPS1	79	60.294	Colobus_angolensis_palliatus
ENSONIG00000019627	-	77	70.776	ENSCGRG00000014021	Rnps1	71	61.927	Cricetulus_griseus_crigri
ENSONIG00000019627	-	83	86.404	ENSCSEG00000000402	RNPS1	76	78.070	Cynoglossus_semilaevis
ENSONIG00000019627	-	78	71.429	ENSCVAG00000010868	RNPS1	77	66.820	Cyprinodon_variegatus
ENSONIG00000019627	-	85	71.369	ENSDORG00000001755	Rnps1	85	64.315	Dipodomys_ordii
ENSONIG00000019627	-	74	67.453	ENSECAG00000023288	RNPS1	76	58.491	Equus_caballus
ENSONIG00000019627	-	85	71.369	ENSFCAG00000007690	RNPS1	80	59.709	Felis_catus
ENSONIG00000019627	-	78	66.514	ENSFHEG00000011705	RNPS1	69	61.084	Fundulus_heteroclitus
ENSONIG00000019627	-	78	68.203	ENSGAFG00000005457	RNPS1	77	64.055	Gambusia_affinis
ENSONIG00000019627	-	83	78.603	ENSGACG00000005641	-	82	73.362	Gasterosteus_aculeatus
ENSONIG00000019627	-	85	71.784	ENSGGOG00000014275	RNPS1	86	60.000	Gorilla_gorilla
ENSONIG00000019627	-	73	68.750	ENSGGOG00000026421	-	79	59.135	Gorilla_gorilla
ENSONIG00000019627	-	83	66.234	ENSHBUG00000002494	RNPS1	82	61.572	Haplochromis_burtoni
ENSONIG00000019627	-	99	99.273	ENSHBUG00000017337	-	99	99.273	Haplochromis_burtoni
ENSONIG00000019627	-	83	62.288	ENSIPUG00000011746	rnps1	91	62.447	Ictalurus_punctatus
ENSONIG00000019627	-	83	72.414	ENSKMAG00000009135	RNPS1	82	68.103	Kryptolebias_marmoratus
ENSONIG00000019627	-	85	71.784	ENSMFAG00000042142	RNPS1	79	60.294	Macaca_fascicularis
ENSONIG00000019627	-	71	69.608	ENSMMUG00000019238	-	79	60.294	Macaca_mulatta
ENSONIG00000019627	-	85	71.784	ENSMLEG00000036928	RNPS1	79	60.294	Mandrillus_leucophaeus
ENSONIG00000019627	-	83	66.094	ENSMAMG00000021609	-	83	65.665	Mastacembelus_armatus
ENSONIG00000019627	-	83	92.105	ENSMAMG00000021148	-	81	92.105	Mastacembelus_armatus
ENSONIG00000019627	-	83	66.667	ENSMZEG00005012742	RNPS1	82	62.009	Maylandia_zebra
ENSONIG00000019627	-	100	99.275	ENSMZEG00005006256	-	100	99.275	Maylandia_zebra
ENSONIG00000019627	-	76	68.349	ENSMGAG00000010042	RNPS1	90	59.633	Meleagris_gallopavo
ENSONIG00000019627	-	85	71.369	ENSMICG00000031543	RNPS1	55	80.870	Microcebus_murinus
ENSONIG00000019627	-	76	74.762	ENSMMOG00000010863	RNPS1	76	74.762	Mola_mola
ENSONIG00000019627	-	86	78.992	ENSMMOG00000004680	-	77	77.064	Mola_mola
ENSONIG00000019627	-	84	71.369	ENSMODG00000015891	RNPS1	78	70.539	Monodelphis_domestica
ENSONIG00000019627	-	76	75.120	ENSNBRG00000023437	RNPS1	75	75.120	Neolamprologus_brichardi
ENSONIG00000019627	-	88	99.180	ENSNBRG00000014540	-	90	99.180	Neolamprologus_brichardi
ENSONIG00000019627	-	88	70.400	ENSNLEG00000009243	RNPS1	88	61.644	Nomascus_leucogenys
ENSONIG00000019627	-	84	72.083	ENSMEUG00000008882	RNPS1	78	64.167	Notamacropus_eugenii
ENSONIG00000019627	-	83	68.559	ENSORLG00000008033	RNPS1	82	68.559	Oryzias_latipes
ENSONIG00000019627	-	83	69.298	ENSORLG00020020207	RNPS1	82	69.298	Oryzias_latipes_hni
ENSONIG00000019627	-	83	68.860	ENSORLG00015000305	-	82	68.860	Oryzias_latipes_hsok
ENSONIG00000019627	-	84	71.667	ENSOARG00000018056	-	67	63.750	Ovis_aries
ENSONIG00000019627	-	87	68.145	ENSPPAG00000011845	RNPS1	80	56.250	Pan_paniscus
ENSONIG00000019627	-	72	68.780	ENSPPAG00000037836	-	86	59.512	Pan_paniscus
ENSONIG00000019627	-	85	71.369	ENSPPRG00000011255	RNPS1	80	59.709	Panthera_pardus
ENSONIG00000019627	-	55	69.536	ENSPTIG00000015643	RNPS1	61	80.870	Panthera_tigris_altaica
ENSONIG00000019627	-	73	68.750	ENSPTRG00000046326	-	81	59.615	Pan_troglodytes
ENSONIG00000019627	-	85	71.369	ENSPTRG00000031310	RNPS1	79	59.804	Pan_troglodytes
ENSONIG00000019627	-	85	71.784	ENSPANG00000015748	RNPS1	79	60.294	Papio_anubis
ENSONIG00000019627	-	55	70.861	ENSPCIG00000016114	-	56	79.130	Phascolarctos_cinereus
ENSONIG00000019627	-	78	69.124	ENSPFOG00000009978	RNPS1	76	65.421	Poecilia_formosa
ENSONIG00000019627	-	78	69.124	ENSPLAG00000009343	RNPS1	76	65.421	Poecilia_latipinna
ENSONIG00000019627	-	78	69.124	ENSPMEG00000008552	RNPS1	76	65.421	Poecilia_mexicana
ENSONIG00000019627	-	78	69.124	ENSPREG00000001843	RNPS1	76	65.421	Poecilia_reticulata
ENSONIG00000019627	-	85	71.369	ENSPCOG00000005478	RNPS1	82	59.804	Propithecus_coquereli
ENSONIG00000019627	-	83	66.667	ENSPNYG00000000585	RNPS1	82	62.009	Pundamilia_nyererei
ENSONIG00000019627	-	83	63.445	ENSPNAG00000017784	-	83	63.445	Pygocentrus_nattereri
ENSONIG00000019627	-	85	65.823	ENSRNOG00000027239	AABR07037800.1	78	66.102	Rattus_norvegicus
ENSONIG00000019627	-	85	71.784	ENSRBIG00000038965	-	88	63.750	Rhinopithecus_bieti
ENSONIG00000019627	-	85	71.784	ENSRROG00000041252	RNPS1	85	63.900	Rhinopithecus_roxellana
ENSONIG00000019627	-	85	71.784	ENSSBOG00000027927	RNPS1	79	60.099	Saimiri_boliviensis_boliviensis
ENSONIG00000019627	-	83	78.017	ENSSFOG00015019341	-	73	67.811	Scleropages_formosus
ENSONIG00000019627	-	83	64.255	ENSTRUG00000008602	RNPS1	83	60.086	Takifugu_rubripes
ENSONIG00000019627	-	83	64.957	ENSTNIG00000009753	RNPS1	81	60.345	Tetraodon_nigroviridis
ENSONIG00000019627	-	88	72.289	ENSTBEG00000009098	RNPS1	88	63.750	Tupaia_belangeri
ENSONIG00000019627	-	84	71.667	ENSUAMG00000004462	RNPS1	88	63.750	Ursus_americanus
ENSONIG00000019627	-	80	68.398	ENSXETG00000024439	rnps1	71	62.727	Xenopus_tropicalis
ENSONIG00000019627	-	83	70.259	ENSXMAG00000004827	RNPS1	82	66.379	Xiphophorus_maculatus