EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSONIG00000019715 (Gene tree)
Gene ID: 100701153
Gene Symbol: xrcc6
Alias: -
Full Name: X-ray repair cross complementing 6
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Plus strand
Length: 6723 bases
Position: chrGL831136.1:5147376-5154098
Accession: 100701153
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000024815	SAP	PF02037.27	7.1e-09	1	1
ENSONIP00000024816	SAP	PF02037.27	7.5e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000024837	-	2545	-	ENSONIP00000024816	610 (aa)	XP_003438750	I3KUM0
ENSONIT00000024836	-	1872	-	ENSONIP00000024815	624 (aa)	-	I3KUL9

Gene Model

Click here to download ENSONIG00000019715's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000019715's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000019715	xrcc6	99	56.908	ENSG00000196419	XRCC6	99	56.743	Homo_sapiens
ENSONIG00000019715	xrcc6	99	87.500	ENSAPOG00000012704	xrcc6	99	87.500	Acanthochromis_polyacanthus
ENSONIG00000019715	xrcc6	100	91.148	ENSACIG00000021277	xrcc6	100	91.148	Amphilophus_citrinellus
ENSONIG00000019715	xrcc6	100	87.377	ENSAOCG00000021344	xrcc6	100	87.377	Amphiprion_ocellaris
ENSONIG00000019715	xrcc6	100	87.541	ENSAPEG00000020712	xrcc6	100	87.541	Amphiprion_percula
ENSONIG00000019715	xrcc6	100	88.689	ENSATEG00000007119	xrcc6	100	88.689	Anabas_testudineus
ENSONIG00000019715	xrcc6	89	61.355	ENSAPLG00000004469	XRCC6	98	61.355	Anas_platyrhynchos
ENSONIG00000019715	xrcc6	99	50.489	ENSANAG00000035230	-	99	50.245	Aotus_nancymaae
ENSONIG00000019715	xrcc6	99	50.656	ENSANAG00000020017	-	99	50.328	Aotus_nancymaae
ENSONIG00000019715	xrcc6	99	56.908	ENSANAG00000018684	XRCC6	98	58.088	Aotus_nancymaae
ENSONIG00000019715	xrcc6	99	48.208	ENSANAG00000023445	-	99	48.208	Aotus_nancymaae
ENSONIG00000019715	xrcc6	100	97.377	ENSACLG00000018608	xrcc6	100	97.377	Astatotilapia_calliptera
ENSONIG00000019715	xrcc6	99	77.961	ENSAMXG00000007545	xrcc6	99	77.961	Astyanax_mexicanus
ENSONIG00000019715	xrcc6	99	56.908	ENSCJAG00000045512	XRCC6	99	56.908	Callithrix_jacchus
ENSONIG00000019715	xrcc6	99	55.757	ENSTSYG00000011348	XRCC6	99	55.302	Carlito_syrichta
ENSONIG00000019715	xrcc6	99	47.377	ENSCCAG00000037663	-	97	47.705	Cebus_capucinus
ENSONIG00000019715	xrcc6	92	55.280	ENSCCAG00000030468	-	99	55.385	Cebus_capucinus
ENSONIG00000019715	xrcc6	99	53.344	ENSCCAG00000030041	-	95	53.344	Cebus_capucinus
ENSONIG00000019715	xrcc6	99	46.166	ENSCCAG00000035711	-	99	45.915	Cebus_capucinus
ENSONIG00000019715	xrcc6	99	56.908	ENSCATG00000042366	XRCC6	99	56.743	Cercocebus_atys
ENSONIG00000019715	xrcc6	99	56.837	ENSCLAG00000016669	XRCC6	99	56.837	Chinchilla_lanigera
ENSONIG00000019715	xrcc6	99	56.908	ENSCSAG00000005784	XRCC6	99	56.743	Chlorocebus_sabaeus
ENSONIG00000019715	xrcc6	99	59.308	ENSCPBG00000020535	XRCC6	99	59.308	Chrysemys_picta_bellii
ENSONIG00000019715	xrcc6	99	34.754	ENSCING00000000633	-	95	35.284	Ciona_intestinalis
ENSONIG00000019715	xrcc6	99	56.908	ENSCANG00000031032	XRCC6	99	56.743	Colobus_angolensis_palliatus
ENSONIG00000019715	xrcc6	99	52.970	ENSCGRG00001019029	Xrcc6	99	52.970	Cricetulus_griseus_chok1gshd
ENSONIG00000019715	xrcc6	99	57.096	ENSCGRG00000001528	Xrcc6	99	57.096	Cricetulus_griseus_crigri
ENSONIG00000019715	xrcc6	100	80.000	ENSCSEG00000020434	xrcc6	100	80.000	Cynoglossus_semilaevis
ENSONIG00000019715	xrcc6	100	85.410	ENSCVAG00000002189	xrcc6	100	85.410	Cyprinodon_variegatus
ENSONIG00000019715	xrcc6	99	75.369	ENSDARG00000071551	xrcc6	99	75.205	Danio_rerio
ENSONIG00000019715	xrcc6	77	52.927	ENSETEG00000015333	-	77	52.927	Echinops_telfairi
ENSONIG00000019715	xrcc6	99	55.392	ENSEASG00005001514	XRCC6	99	55.719	Equus_asinus_asinus
ENSONIG00000019715	xrcc6	99	55.848	ENSECAG00000017563	XRCC6	99	55.654	Equus_caballus
ENSONIG00000019715	xrcc6	99	76.480	ENSELUG00000020301	xrcc6	99	76.480	Esox_lucius
ENSONIG00000019715	xrcc6	99	59.411	ENSFALG00000011908	XRCC6	96	59.574	Ficedula_albicollis
ENSONIG00000019715	xrcc6	100	86.393	ENSFHEG00000016833	xrcc6	100	86.393	Fundulus_heteroclitus
ENSONIG00000019715	xrcc6	99	68.567	ENSGMOG00000013524	xrcc6	100	68.567	Gadus_morhua
ENSONIG00000019715	xrcc6	95	66.667	ENSGALG00000011932	XRCC6	99	59.314	Gallus_gallus
ENSONIG00000019715	xrcc6	100	83.279	ENSGAFG00000008130	xrcc6	100	83.279	Gambusia_affinis
ENSONIG00000019715	xrcc6	99	83.361	ENSGACG00000004868	xrcc6	99	83.361	Gasterosteus_aculeatus
ENSONIG00000019715	xrcc6	99	59.143	ENSGAGG00000017518	XRCC6	99	59.143	Gopherus_agassizii
ENSONIG00000019715	xrcc6	99	56.908	ENSGGOG00000015885	XRCC6	99	56.743	Gorilla_gorilla
ENSONIG00000019715	xrcc6	93	97.703	ENSHBUG00000023281	xrcc6	100	97.703	Haplochromis_burtoni
ENSONIG00000019715	xrcc6	99	55.776	ENSHGLG00000018078	XRCC6	99	55.611	Heterocephalus_glaber_female
ENSONIG00000019715	xrcc6	99	55.776	ENSHGLG00100011264	XRCC6	99	55.611	Heterocephalus_glaber_male
ENSONIG00000019715	xrcc6	99	80.263	ENSHCOG00000009821	xrcc6	99	80.263	Hippocampus_comes
ENSONIG00000019715	xrcc6	99	75.164	ENSIPUG00000000767	xrcc6	99	75.164	Ictalurus_punctatus
ENSONIG00000019715	xrcc6	99	56.507	ENSSTOG00000009490	XRCC6	99	56.046	Ictidomys_tridecemlineatus
ENSONIG00000019715	xrcc6	99	51.713	ENSJJAG00000017136	Xrcc6	99	52.529	Jaculus_jaculus
ENSONIG00000019715	xrcc6	99	85.855	ENSKMAG00000002141	xrcc6	99	85.855	Kryptolebias_marmoratus
ENSONIG00000019715	xrcc6	99	86.020	ENSLBEG00000002691	xrcc6	99	86.020	Labrus_bergylta
ENSONIG00000019715	xrcc6	83	67.347	ENSLOCG00000011533	xrcc6	98	67.347	Lepisosteus_oculatus
ENSONIG00000019715	xrcc6	99	56.908	ENSMFAG00000003352	XRCC6	99	56.743	Macaca_fascicularis
ENSONIG00000019715	xrcc6	99	56.908	ENSMMUG00000001856	XRCC6	99	56.743	Macaca_mulatta
ENSONIG00000019715	xrcc6	99	56.908	ENSMNEG00000035076	XRCC6	99	56.743	Macaca_nemestrina
ENSONIG00000019715	xrcc6	99	56.908	ENSMLEG00000019869	XRCC6	99	56.743	Mandrillus_leucophaeus
ENSONIG00000019715	xrcc6	100	85.270	ENSMAMG00000003368	xrcc6	100	85.270	Mastacembelus_armatus
ENSONIG00000019715	xrcc6	96	84.300	ENSMAMG00000003405	xrcc6	97	84.418	Mastacembelus_armatus
ENSONIG00000019715	xrcc6	100	97.213	ENSMZEG00005028080	xrcc6	100	97.213	Maylandia_zebra
ENSONIG00000019715	xrcc6	99	59.706	ENSMGAG00000012146	XRCC6	99	59.740	Meleagris_gallopavo
ENSONIG00000019715	xrcc6	99	57.096	ENSMAUG00000017340	Xrcc6	99	57.096	Mesocricetus_auratus
ENSONIG00000019715	xrcc6	99	56.766	ENSMOCG00000015717	Xrcc6	99	56.931	Microtus_ochrogaster
ENSONIG00000019715	xrcc6	100	83.770	ENSMMOG00000003536	xrcc6	99	83.770	Mola_mola
ENSONIG00000019715	xrcc6	100	86.557	ENSMALG00000013912	xrcc6	95	86.557	Monopterus_albus
ENSONIG00000019715	xrcc6	99	53.607	MGP_CAROLIEiJ_G0020067	Xrcc6	99	53.607	Mus_caroli
ENSONIG00000019715	xrcc6	99	57.541	ENSMUSG00000022471	Xrcc6	99	59.696	Mus_musculus
ENSONIG00000019715	xrcc6	99	57.377	MGP_PahariEiJ_G0020069	Xrcc6	99	57.377	Mus_pahari
ENSONIG00000019715	xrcc6	96	58.120	MGP_SPRETEiJ_G0020967	Xrcc6	99	58.048	Mus_spretus
ENSONIG00000019715	xrcc6	99	56.507	ENSNGAG00000013750	Xrcc6	99	56.271	Nannospalax_galili
ENSONIG00000019715	xrcc6	100	97.213	ENSNBRG00000004125	xrcc6	100	97.213	Neolamprologus_brichardi
ENSONIG00000019715	xrcc6	96	57.094	ENSOPRG00000002386	XRCC6	99	57.094	Ochotona_princeps
ENSONIG00000019715	xrcc6	99	55.974	ENSODEG00000015847	XRCC6	99	55.974	Octodon_degus
ENSONIG00000019715	xrcc6	68	58.738	ENSOANG00000011328	XRCC6	99	58.738	Ornithorhynchus_anatinus
ENSONIG00000019715	xrcc6	99	56.178	ENSOCUG00000006948	XRCC6	99	56.343	Oryctolagus_cuniculus
ENSONIG00000019715	xrcc6	100	84.779	ENSORLG00020007820	xrcc6	100	84.779	Oryzias_latipes_hni
ENSONIG00000019715	xrcc6	100	84.452	ENSORLG00015006406	xrcc6	100	84.452	Oryzias_latipes_hsok
ENSONIG00000019715	xrcc6	100	85.434	ENSOMEG00000008998	xrcc6	100	85.434	Oryzias_melastigma
ENSONIG00000019715	xrcc6	99	55.882	ENSOGAG00000008821	XRCC6	99	55.719	Otolemur_garnettii
ENSONIG00000019715	xrcc6	90	57.790	ENSPPAG00000037167	XRCC6	99	57.790	Pan_paniscus
ENSONIG00000019715	xrcc6	99	56.908	ENSPTRG00000045824	XRCC6	99	57.877	Pan_troglodytes
ENSONIG00000019715	xrcc6	99	56.908	ENSPTRG00000022548	XRCC6	99	57.877	Pan_troglodytes
ENSONIG00000019715	xrcc6	99	56.743	ENSPANG00000001252	XRCC6	99	58.798	Papio_anubis
ENSONIG00000019715	xrcc6	99	72.039	ENSPKIG00000003974	xrcc6	99	72.039	Paramormyrops_kingsleyae
ENSONIG00000019715	xrcc6	99	81.229	ENSPMGG00000014220	xrcc6	100	81.063	Periophthalmus_magnuspinnatus
ENSONIG00000019715	xrcc6	99	56.766	ENSPEMG00000023446	Xrcc6	99	56.766	Peromyscus_maniculatus_bairdii
ENSONIG00000019715	xrcc6	99	58.155	ENSPCIG00000026409	XRCC6	99	58.155	Phascolarctos_cinereus
ENSONIG00000019715	xrcc6	100	85.410	ENSPFOG00000017173	xrcc6	100	85.410	Poecilia_formosa
ENSONIG00000019715	xrcc6	100	84.918	ENSPLAG00000000562	xrcc6	100	84.918	Poecilia_latipinna
ENSONIG00000019715	xrcc6	100	85.246	ENSPMEG00000018478	xrcc6	100	85.246	Poecilia_mexicana
ENSONIG00000019715	xrcc6	100	84.967	ENSPREG00000020957	xrcc6	94	83.981	Poecilia_reticulata
ENSONIG00000019715	xrcc6	99	51.151	ENSPPYG00000011876	XRCC6	99	50.571	Pongo_abelii
ENSONIG00000019715	xrcc6	99	56.766	ENSPVAG00000001168	XRCC6	99	56.766	Pteropus_vampyrus
ENSONIG00000019715	xrcc6	100	97.049	ENSPNYG00000003815	xrcc6	100	92.356	Pundamilia_nyererei
ENSONIG00000019715	xrcc6	99	56.721	ENSRNOG00000006392	Xrcc6	99	56.885	Rattus_norvegicus
ENSONIG00000019715	xrcc6	99	52.796	ENSRBIG00000039794	XRCC6	99	53.859	Rhinopithecus_bieti
ENSONIG00000019715	xrcc6	99	56.908	ENSRROG00000030297	XRCC6	99	56.743	Rhinopithecus_roxellana
ENSONIG00000019715	xrcc6	66	52.346	ENSSBOG00000024724	-	98	52.346	Saimiri_boliviensis_boliviensis
ENSONIG00000019715	xrcc6	99	57.237	ENSSHAG00000010790	XRCC6	99	57.237	Sarcophilus_harrisii
ENSONIG00000019715	xrcc6	99	73.849	ENSSFOG00015014409	xrcc6	99	73.849	Scleropages_formosus
ENSONIG00000019715	xrcc6	100	87.541	ENSSMAG00000006496	xrcc6	100	87.541	Scophthalmus_maximus
ENSONIG00000019715	xrcc6	100	87.705	ENSSDUG00000007542	xrcc6	100	87.705	Seriola_dumerili
ENSONIG00000019715	xrcc6	100	87.049	ENSSLDG00000009974	xrcc6	100	87.049	Seriola_lalandi_dorsalis
ENSONIG00000019715	xrcc6	99	58.882	ENSSPUG00000012086	XRCC6	99	58.717	Sphenodon_punctatus
ENSONIG00000019715	xrcc6	100	87.049	ENSSPAG00000015199	xrcc6	100	87.049	Stegastes_partitus
ENSONIG00000019715	xrcc6	95	60.929	ENSTGUG00000009852	-	94	60.929	Taeniopygia_guttata
ENSONIG00000019715	xrcc6	99	79.770	ENSTRUG00000017070	xrcc6	99	80.099	Takifugu_rubripes
ENSONIG00000019715	xrcc6	96	79.526	ENSTNIG00000012947	xrcc6	99	79.526	Tetraodon_nigroviridis
ENSONIG00000019715	xrcc6	95	53.103	ENSTBEG00000011736	XRCC6	99	53.103	Tupaia_belangeri
ENSONIG00000019715	xrcc6	98	47.386	ENSTTRG00000006749	XRCC6	99	47.712	Tursiops_truncatus
ENSONIG00000019715	xrcc6	100	85.246	ENSXMAG00000009691	xrcc6	100	85.246	Xiphophorus_maculatus