EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSONIG00000020264 (Gene tree)
Gene ID: 100696872
Gene Symbol: shq1
Alias: -
Full Name: SHQ1%2C H/ACA ribonucleoprotein assembly factor
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Plus strand
Length: 41078 bases
Position: chrGL831152.1:1854849-1895926
Accession: ZDB-GENE-070112-1412
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000025533	SHQ1	PF04925.15	2.4e-66	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000025554	-	1803	-	ENSONIP00000025533	601 (aa)	-	I3KWN7

Gene Model

Click here to download ENSONIG00000020264's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000020264's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000020264	shq1	68	61.391	ENSG00000144736	SHQ1	96	68.750	Homo_sapiens
ENSONIG00000020264	shq1	100	78.689	ENSAPOG00000000397	shq1	99	78.197	Acanthochromis_polyacanthus
ENSONIG00000020264	shq1	92	50.874	ENSAMEG00000015140	SHQ1	76	59.954	Ailuropoda_melanoleuca
ENSONIG00000020264	shq1	100	85.572	ENSACIG00000021249	shq1	99	85.075	Amphilophus_citrinellus
ENSONIG00000020264	shq1	100	79.119	ENSAOCG00000023311	shq1	99	78.793	Amphiprion_ocellaris
ENSONIG00000020264	shq1	100	79.146	ENSAPEG00000021686	shq1	99	78.818	Amphiprion_percula
ENSONIG00000020264	shq1	99	74.172	ENSATEG00000008475	shq1	99	73.675	Anabas_testudineus
ENSONIG00000020264	shq1	73	57.111	ENSAPLG00000013926	SHQ1	87	57.684	Anas_platyrhynchos
ENSONIG00000020264	shq1	70	61.717	ENSACAG00000014809	SHQ1	66	61.435	Anolis_carolinensis
ENSONIG00000020264	shq1	78	41.578	ENSANAG00000030500	-	74	43.448	Aotus_nancymaae
ENSONIG00000020264	shq1	79	57.557	ENSANAG00000029241	SHQ1	76	60.090	Aotus_nancymaae
ENSONIG00000020264	shq1	100	97.671	ENSACLG00000023077	shq1	96	97.671	Astatotilapia_calliptera
ENSONIG00000020264	shq1	71	64.637	ENSAMXG00000043822	shq1	75	64.908	Astyanax_mexicanus
ENSONIG00000020264	shq1	68	60.911	ENSCJAG00000015131	SHQ1	76	60.090	Callithrix_jacchus
ENSONIG00000020264	shq1	65	60.150	ENSCAFG00000006434	SHQ1	76	59.865	Canis_familiaris
ENSONIG00000020264	shq1	65	60.401	ENSCAFG00020016743	SHQ1	76	60.090	Canis_lupus_dingo
ENSONIG00000020264	shq1	94	52.226	ENSCHIG00000012271	SHQ1	69	60.811	Capra_hircus
ENSONIG00000020264	shq1	68	57.385	ENSTSYG00000014439	SHQ1	77	56.659	Carlito_syrichta
ENSONIG00000020264	shq1	86	47.399	ENSCAPG00000009343	SHQ1	71	54.593	Cavia_aperea
ENSONIG00000020264	shq1	94	49.660	ENSCPOG00000011443	SHQ1	74	59.725	Cavia_porcellus
ENSONIG00000020264	shq1	78	43.404	ENSCCAG00000036087	-	74	44.804	Cebus_capucinus
ENSONIG00000020264	shq1	68	52.885	ENSCCAG00000027080	SHQ1	75	52.584	Cebus_capucinus
ENSONIG00000020264	shq1	68	62.110	ENSCATG00000041238	SHQ1	76	61.211	Cercocebus_atys
ENSONIG00000020264	shq1	94	51.890	ENSCLAG00000004206	SHQ1	76	59.641	Chinchilla_lanigera
ENSONIG00000020264	shq1	53	60.061	ENSCSAG00000011514	SHQ1	72	59.104	Chlorocebus_sabaeus
ENSONIG00000020264	shq1	99	49.597	ENSCPBG00000006441	SHQ1	71	59.729	Chrysemys_picta_bellii
ENSONIG00000020264	shq1	65	42.785	ENSCING00000008013	-	97	40.950	Ciona_intestinalis
ENSONIG00000020264	shq1	65	40.561	ENSCSAVG00000002332	-	99	40.000	Ciona_savignyi
ENSONIG00000020264	shq1	79	56.478	ENSCANG00000039295	SHQ1	77	60.762	Colobus_angolensis_palliatus
ENSONIG00000020264	shq1	73	58.744	ENSCGRG00001012583	Shq1	78	57.978	Cricetulus_griseus_chok1gshd
ENSONIG00000020264	shq1	73	58.744	ENSCGRG00000009849	Shq1	78	57.978	Cricetulus_griseus_crigri
ENSONIG00000020264	shq1	99	70.772	ENSCSEG00000007829	shq1	98	70.772	Cynoglossus_semilaevis
ENSONIG00000020264	shq1	99	70.854	ENSCVAG00000020049	shq1	99	71.357	Cyprinodon_variegatus
ENSONIG00000020264	shq1	98	54.050	ENSDARG00000058522	shq1	98	53.065	Danio_rerio
ENSONIG00000020264	shq1	92	52.189	ENSDNOG00000033937	SHQ1	75	60.731	Dasypus_novemcinctus
ENSONIG00000020264	shq1	68	54.436	ENSETEG00000005766	SHQ1	76	53.425	Echinops_telfairi
ENSONIG00000020264	shq1	61	47.594	ENSEBUG00000005445	shq1	79	48.295	Eptatretus_burgeri
ENSONIG00000020264	shq1	73	60.356	ENSEASG00005002237	SHQ1	76	60.674	Equus_asinus_asinus
ENSONIG00000020264	shq1	73	60.356	ENSECAG00000015673	SHQ1	75	60.674	Equus_caballus
ENSONIG00000020264	shq1	72	60.948	ENSEEUG00000010568	SHQ1	76	61.036	Erinaceus_europaeus
ENSONIG00000020264	shq1	98	61.616	ENSELUG00000003476	shq1	99	60.920	Esox_lucius
ENSONIG00000020264	shq1	78	57.469	ENSFCAG00000012781	SHQ1	77	60.360	Felis_catus
ENSONIG00000020264	shq1	99	49.375	ENSFALG00000013428	SHQ1	72	62.500	Ficedula_albicollis
ENSONIG00000020264	shq1	68	59.712	ENSFDAG00000005595	SHQ1	67	59.361	Fukomys_damarensis
ENSONIG00000020264	shq1	98	70.707	ENSFHEG00000017552	shq1	100	70.539	Fundulus_heteroclitus
ENSONIG00000020264	shq1	65	76.093	ENSGMOG00000007350	shq1	100	75.578	Gadus_morhua
ENSONIG00000020264	shq1	99	48.788	ENSGALG00000007798	SHQ1	71	59.862	Gallus_gallus
ENSONIG00000020264	shq1	65	80.206	ENSGACG00000011797	shq1	100	79.949	Gasterosteus_aculeatus
ENSONIG00000020264	shq1	68	61.391	ENSGGOG00000034818	SHQ1	76	60.538	Gorilla_gorilla
ENSONIG00000020264	shq1	100	97.671	ENSHBUG00000010857	shq1	99	97.671	Haplochromis_burtoni
ENSONIG00000020264	shq1	92	49.141	ENSHGLG00000003637	SHQ1	68	59.589	Heterocephalus_glaber_female
ENSONIG00000020264	shq1	92	49.310	ENSHGLG00100011957	SHQ1	68	59.589	Heterocephalus_glaber_male
ENSONIG00000020264	shq1	99	64.154	ENSHCOG00000010799	shq1	99	63.652	Hippocampus_comes
ENSONIG00000020264	shq1	94	56.063	ENSIPUG00000001247	shq1	76	66.667	Ictalurus_punctatus
ENSONIG00000020264	shq1	68	59.427	ENSSTOG00000010043	SHQ1	81	57.623	Ictidomys_tridecemlineatus
ENSONIG00000020264	shq1	68	60.577	ENSJJAG00000017611	Shq1	76	60.183	Jaculus_jaculus
ENSONIG00000020264	shq1	100	71.854	ENSKMAG00000004457	shq1	99	71.523	Kryptolebias_marmoratus
ENSONIG00000020264	shq1	72	63.492	ENSLACG00000014243	SHQ1	66	63.492	Latimeria_chalumnae
ENSONIG00000020264	shq1	99	55.906	ENSLOCG00000009970	shq1	99	55.906	Lepisosteus_oculatus
ENSONIG00000020264	shq1	68	61.871	ENSMFAG00000039148	SHQ1	76	60.987	Macaca_fascicularis
ENSONIG00000020264	shq1	68	43.029	ENSMFAG00000037396	-	74	42.986	Macaca_fascicularis
ENSONIG00000020264	shq1	60	60.976	ENSMMUG00000009571	SHQ1	71	60.050	Macaca_mulatta
ENSONIG00000020264	shq1	68	42.959	ENSMMUG00000021761	-	74	42.986	Macaca_mulatta
ENSONIG00000020264	shq1	68	61.871	ENSMNEG00000032667	SHQ1	76	60.987	Macaca_nemestrina
ENSONIG00000020264	shq1	68	61.871	ENSMLEG00000038493	SHQ1	76	60.987	Mandrillus_leucophaeus
ENSONIG00000020264	shq1	99	76.183	ENSMAMG00000023432	shq1	95	75.530	Mastacembelus_armatus
ENSONIG00000020264	shq1	100	97.504	ENSMZEG00005008649	shq1	99	97.504	Maylandia_zebra
ENSONIG00000020264	shq1	99	49.837	ENSMGAG00000009640	SHQ1	72	59.954	Meleagris_gallopavo
ENSONIG00000020264	shq1	73	58.969	ENSMAUG00000022030	Shq1	78	58.202	Mesocricetus_auratus
ENSONIG00000020264	shq1	77	56.780	ENSMICG00000009224	SHQ1	76	59.641	Microcebus_murinus
ENSONIG00000020264	shq1	78	57.796	ENSMOCG00000017836	Shq1	78	58.296	Microtus_ochrogaster
ENSONIG00000020264	shq1	99	70.117	ENSMMOG00000010569	shq1	99	69.783	Mola_mola
ENSONIG00000020264	shq1	78	56.122	ENSMODG00000003926	SHQ1	78	59.361	Monodelphis_domestica
ENSONIG00000020264	shq1	99	74.542	ENSMALG00000008870	shq1	99	74.210	Monopterus_albus
ENSONIG00000020264	shq1	78	56.458	MGP_CAROLIEiJ_G0028689	Shq1	78	57.753	Mus_caroli
ENSONIG00000020264	shq1	78	56.250	ENSMUSG00000035378	Shq1	78	57.753	Mus_musculus
ENSONIG00000020264	shq1	74	57.489	MGP_PahariEiJ_G0022440	Shq1	78	57.848	Mus_pahari
ENSONIG00000020264	shq1	78	56.250	MGP_SPRETEiJ_G0029717	Shq1	78	57.753	Mus_spretus
ENSONIG00000020264	shq1	92	50.260	ENSMPUG00000017006	SHQ1	75	59.551	Mustela_putorius_furo
ENSONIG00000020264	shq1	87	50.187	ENSMLUG00000013539	SHQ1	74	59.231	Myotis_lucifugus
ENSONIG00000020264	shq1	78	49.367	ENSNGAG00000023317	Shq1	77	52.500	Nannospalax_galili
ENSONIG00000020264	shq1	85	96.875	ENSNBRG00000024004	shq1	99	96.875	Neolamprologus_brichardi
ENSONIG00000020264	shq1	79	57.085	ENSNLEG00000002731	SHQ1	76	60.762	Nomascus_leucogenys
ENSONIG00000020264	shq1	68	54.630	ENSMEUG00000009350	-	70	54.630	Notamacropus_eugenii
ENSONIG00000020264	shq1	74	58.462	ENSODEG00000009192	SHQ1	81	59.417	Octodon_degus
ENSONIG00000020264	shq1	95	51.695	ENSOCUG00000016695	SHQ1	76	60.762	Oryctolagus_cuniculus
ENSONIG00000020264	shq1	99	65.327	ENSORLG00000023538	shq1	99	64.489	Oryzias_latipes
ENSONIG00000020264	shq1	99	66.050	ENSORLG00020003697	shq1	99	65.210	Oryzias_latipes_hni
ENSONIG00000020264	shq1	99	64.657	ENSORLG00015021040	shq1	99	63.987	Oryzias_latipes_hsok
ENSONIG00000020264	shq1	99	66.054	ENSOMEG00000001225	shq1	99	65.385	Oryzias_melastigma
ENSONIG00000020264	shq1	78	56.965	ENSOGAG00000003898	SHQ1	78	59.688	Otolemur_garnettii
ENSONIG00000020264	shq1	68	60.859	ENSOARG00000009547	SHQ1	76	60.090	Ovis_aries
ENSONIG00000020264	shq1	68	61.631	ENSPPAG00000027714	SHQ1	76	60.762	Pan_paniscus
ENSONIG00000020264	shq1	79	42.029	ENSPPAG00000043263	-	73	43.448	Pan_paniscus
ENSONIG00000020264	shq1	78	57.676	ENSPPRG00000004769	SHQ1	76	60.360	Panthera_pardus
ENSONIG00000020264	shq1	78	54.717	ENSPTIG00000011478	SHQ1	75	57.078	Panthera_tigris_altaica
ENSONIG00000020264	shq1	79	41.079	ENSPTRG00000048303	-	73	42.396	Pan_troglodytes
ENSONIG00000020264	shq1	68	61.631	ENSPTRG00000015106	SHQ1	76	60.762	Pan_troglodytes
ENSONIG00000020264	shq1	68	61.058	ENSPANG00000002881	SHQ1	76	61.211	Papio_anubis
ENSONIG00000020264	shq1	99	55.776	ENSPKIG00000021517	shq1	75	67.667	Paramormyrops_kingsleyae
ENSONIG00000020264	shq1	72	60.091	ENSPSIG00000005536	SHQ1	72	60.722	Pelodiscus_sinensis
ENSONIG00000020264	shq1	98	62.415	ENSPMGG00000008838	shq1	100	61.307	Periophthalmus_magnuspinnatus
ENSONIG00000020264	shq1	65	60.500	ENSPEMG00000000251	Shq1	76	58.352	Peromyscus_maniculatus_bairdii
ENSONIG00000020264	shq1	72	58.503	ENSPMAG00000005372	shq1	99	58.050	Petromyzon_marinus
ENSONIG00000020264	shq1	92	67.928	ENSPFOG00000003118	shq1	99	68.525	Poecilia_formosa
ENSONIG00000020264	shq1	77	66.595	ENSPMEG00000011076	shq1	98	66.749	Poecilia_mexicana
ENSONIG00000020264	shq1	83	67.131	ENSPREG00000000591	shq1	92	67.197	Poecilia_reticulata
ENSONIG00000020264	shq1	79	56.907	ENSPPYG00000013717	SHQ1	76	60.538	Pongo_abelii
ENSONIG00000020264	shq1	68	61.190	ENSPCAG00000009035	SHQ1	77	60.538	Procavia_capensis
ENSONIG00000020264	shq1	68	61.631	ENSPCOG00000008415	SHQ1	76	60.762	Propithecus_coquereli
ENSONIG00000020264	shq1	92	51.211	ENSPVAG00000017392	SHQ1	77	60.225	Pteropus_vampyrus
ENSONIG00000020264	shq1	100	97.671	ENSPNYG00000003878	shq1	99	97.671	Pundamilia_nyererei
ENSONIG00000020264	shq1	98	57.541	ENSPNAG00000026840	shq1	99	57.374	Pygocentrus_nattereri
ENSONIG00000020264	shq1	73	58.929	ENSRNOG00000005433	Shq1	73	58.202	Rattus_norvegicus
ENSONIG00000020264	shq1	79	54.825	ENSRBIG00000026280	SHQ1	76	59.226	Rhinopithecus_bieti
ENSONIG00000020264	shq1	79	56.883	ENSRROG00000034126	SHQ1	77	61.435	Rhinopithecus_roxellana
ENSONIG00000020264	shq1	68	54.567	ENSSBOG00000021038	SHQ1	74	53.933	Saimiri_boliviensis_boliviensis
ENSONIG00000020264	shq1	71	60.502	ENSSHAG00000015077	SHQ1	77	60.271	Sarcophilus_harrisii
ENSONIG00000020264	shq1	99	59.228	ENSSFOG00015016241	shq1	78	71.860	Scleropages_formosus
ENSONIG00000020264	shq1	99	74.627	ENSSMAG00000016151	shq1	99	73.964	Scophthalmus_maximus
ENSONIG00000020264	shq1	99	75.908	ENSSDUG00000011986	shq1	99	76.238	Seriola_dumerili
ENSONIG00000020264	shq1	99	75.041	ENSSLDG00000013908	shq1	99	75.207	Seriola_lalandi_dorsalis
ENSONIG00000020264	shq1	56	58.309	ENSSARG00000007119	SHQ1	77	50.452	Sorex_araneus
ENSONIG00000020264	shq1	85	47.874	ENSSPUG00000011526	-	65	59.544	Sphenodon_punctatus
ENSONIG00000020264	shq1	92	52.743	ENSSSCG00000011518	SHQ1	76	60.407	Sus_scrofa
ENSONIG00000020264	shq1	68	62.381	ENSTGUG00000009933	SHQ1	76	61.659	Taeniopygia_guttata
ENSONIG00000020264	shq1	99	65.657	ENSTRUG00000009446	shq1	99	66.835	Takifugu_rubripes
ENSONIG00000020264	shq1	77	69.658	ENSTNIG00000007354	shq1	96	72.936	Tetraodon_nigroviridis
ENSONIG00000020264	shq1	72	59.594	ENSTTRG00000005320	SHQ1	76	59.685	Tursiops_truncatus
ENSONIG00000020264	shq1	94	50.607	ENSUMAG00000024031	SHQ1	76	59.404	Ursus_maritimus
ENSONIG00000020264	shq1	69	49.885	ENSVPAG00000004880	SHQ1	59	60.635	Vicugna_pacos
ENSONIG00000020264	shq1	65	60.150	ENSVVUG00000013906	SHQ1	76	59.551	Vulpes_vulpes
ENSONIG00000020264	shq1	99	47.974	ENSXETG00000032215	shq1	99	48.544	Xenopus_tropicalis