EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSONIG00000020289 (Gene tree)
Gene ID: -
Gene Symbol: mbd1b
Alias: -
Full Name: methyl-CpG binding domain protein 1b
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Minus strand
Length: 12831 bases
Position: chrGL831152.1:3025034-3037864
Accession: ZDB-GENE-030131-6318
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000025566	MBD	PF01429.19	5.5e-14	1	1
ENSONIP00000025565	MBD	PF01429.19	8e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000025586	-	4942	-	ENSONIP00000025565	840 (aa)	-	I3KWR9
ENSONIT00000025587	-	2334	-	ENSONIP00000025566	778 (aa)	-	I3KWS0

Gene Model

Click here to download ENSONIG00000020289's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000020289's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000020289	mbd1b	99	74.675	ENSAPOG00000012810	mbd1b	99	74.675	Acanthochromis_polyacanthus
ENSONIG00000020289	mbd1b	99	68.298	ENSACIG00000010590	mbd1b	99	68.648	Amphilophus_citrinellus
ENSONIG00000020289	mbd1b	99	76.185	ENSAOCG00000020272	mbd1b	99	76.185	Amphiprion_ocellaris
ENSONIG00000020289	mbd1b	99	76.303	ENSAPEG00000023230	mbd1b	99	76.303	Amphiprion_percula
ENSONIG00000020289	mbd1b	99	73.036	ENSATEG00000009608	mbd1b	99	73.388	Anabas_testudineus
ENSONIG00000020289	mbd1b	99	96.663	ENSACLG00000021383	mbd1b	100	96.663	Astatotilapia_calliptera
ENSONIG00000020289	mbd1b	52	35.922	ENSBTAG00000003801	MBD1	60	36.782	Bos_taurus
ENSONIG00000020289	mbd1b	52	35.922	ENSCHIG00000021134	MBD1	59	36.364	Capra_hircus
ENSONIG00000020289	mbd1b	55	32.609	ENSCPOG00000001671	MBD1	63	31.605	Cavia_porcellus
ENSONIG00000020289	mbd1b	50	31.707	ENSCATG00000029959	MBD1	65	37.500	Cercocebus_atys
ENSONIG00000020289	mbd1b	98	58.851	ENSCSEG00000009082	mbd1b	94	62.328	Cynoglossus_semilaevis
ENSONIG00000020289	mbd1b	99	64.024	ENSCVAG00000001167	mbd1b	99	63.669	Cyprinodon_variegatus
ENSONIG00000020289	mbd1b	99	38.499	ENSDARG00000025699	mbd1b	91	34.820	Danio_rerio
ENSONIG00000020289	mbd1b	51	32.176	ENSEASG00005003857	MBD1	61	32.821	Equus_asinus_asinus
ENSONIG00000020289	mbd1b	98	46.126	ENSELUG00000004375	mbd1b	99	43.373	Esox_lucius
ENSONIG00000020289	mbd1b	52	33.486	ENSFCAG00000015730	MBD1	60	33.499	Felis_catus
ENSONIG00000020289	mbd1b	95	65.457	ENSFHEG00000020120	mbd1b	91	67.635	Fundulus_heteroclitus
ENSONIG00000020289	mbd1b	98	61.856	ENSGAFG00000008975	mbd1b	90	66.578	Gambusia_affinis
ENSONIG00000020289	mbd1b	86	51.719	ENSGACG00000012106	-	99	54.345	Gasterosteus_aculeatus
ENSONIG00000020289	mbd1b	99	96.544	ENSHBUG00000014270	mbd1b	100	96.544	Haplochromis_burtoni
ENSONIG00000020289	mbd1b	99	56.138	ENSHCOG00000009952	mbd1b	99	55.781	Hippocampus_comes
ENSONIG00000020289	mbd1b	99	37.985	ENSIPUG00000015243	-	95	37.235	Ictalurus_punctatus
ENSONIG00000020289	mbd1b	96	65.037	ENSKMAG00000020760	mbd1b	99	64.235	Kryptolebias_marmoratus
ENSONIG00000020289	mbd1b	68	37.888	ENSLACG00000002414	-	80	37.888	Latimeria_chalumnae
ENSONIG00000020289	mbd1b	50	32.235	ENSLAFG00000031328	MBD1	63	32.048	Loxodonta_africana
ENSONIG00000020289	mbd1b	51	55.385	ENSMFAG00000026335	MBD1	65	36.905	Macaca_fascicularis
ENSONIG00000020289	mbd1b	51	55.385	ENSMNEG00000038822	MBD1	65	36.905	Macaca_nemestrina
ENSONIG00000020289	mbd1b	50	31.463	ENSMLEG00000043121	MBD1	65	36.905	Mandrillus_leucophaeus
ENSONIG00000020289	mbd1b	80	70.458	ENSMAMG00000023341	-	95	71.166	Mastacembelus_armatus
ENSONIG00000020289	mbd1b	99	96.782	ENSMZEG00005010421	mbd1b	100	96.782	Maylandia_zebra
ENSONIG00000020289	mbd1b	52	50.633	ENSMICG00000006414	MBD1	65	35.393	Microcebus_murinus
ENSONIG00000020289	mbd1b	83	95.833	ENSMMOG00000011607	mbd1b	84	95.833	Mola_mola
ENSONIG00000020289	mbd1b	99	73.443	ENSMALG00000007808	mbd1b	99	72.738	Monopterus_albus
ENSONIG00000020289	mbd1b	51	30.310	MGP_PahariEiJ_G0019128	Mbd1	59	37.195	Mus_pahari
ENSONIG00000020289	mbd1b	99	66.042	ENSORLG00000029390	mbd1b	99	66.042	Oryzias_latipes
ENSONIG00000020289	mbd1b	99	65.808	ENSORLG00020000575	mbd1b	99	65.808	Oryzias_latipes_hni
ENSONIG00000020289	mbd1b	99	65.965	ENSORLG00015014812	mbd1b	99	65.497	Oryzias_latipes_hsok
ENSONIG00000020289	mbd1b	99	64.802	ENSOMEG00000023660	mbd1b	99	64.569	Oryzias_melastigma
ENSONIG00000020289	mbd1b	52	33.487	ENSPPRG00000021387	MBD1	66	36.782	Panthera_pardus
ENSONIG00000020289	mbd1b	52	33.025	ENSPTIG00000021231	MBD1	59	36.782	Panthera_tigris_altaica
ENSONIG00000020289	mbd1b	50	31.463	ENSPANG00000010867	MBD1	65	36.905	Papio_anubis
ENSONIG00000020289	mbd1b	98	62.182	ENSPFOG00000007511	mbd1b	99	62.909	Poecilia_formosa
ENSONIG00000020289	mbd1b	98	62.667	ENSPLAG00000021258	mbd1b	99	62.909	Poecilia_latipinna
ENSONIG00000020289	mbd1b	98	61.548	ENSPMEG00000024145	mbd1b	99	62.954	Poecilia_mexicana
ENSONIG00000020289	mbd1b	98	61.261	ENSPREG00000021805	mbd1b	90	66.268	Poecilia_reticulata
ENSONIG00000020289	mbd1b	52	34.783	ENSPCOG00000012450	MBD1	65	36.310	Propithecus_coquereli
ENSONIG00000020289	mbd1b	98	37.791	ENSPNAG00000018075	mbd1b	92	38.143	Pygocentrus_nattereri
ENSONIG00000020289	mbd1b	100	35.367	ENSSFOG00015008591	-	85	36.883	Scleropages_formosus
ENSONIG00000020289	mbd1b	93	73.067	ENSSMAG00000014640	mbd1b	82	75.130	Scophthalmus_maximus
ENSONIG00000020289	mbd1b	99	72.379	ENSSDUG00000012996	mbd1b	99	73.619	Seriola_dumerili
ENSONIG00000020289	mbd1b	69	88.387	ENSSLDG00000012422	mbd1b	79	88.387	Seriola_lalandi_dorsalis
ENSONIG00000020289	mbd1b	99	78.597	ENSSPAG00000021447	mbd1b	99	78.597	Stegastes_partitus
ENSONIG00000020289	mbd1b	99	64.192	ENSTRUG00000013422	mbd1b	99	64.192	Takifugu_rubripes
ENSONIG00000020289	mbd1b	70	66.917	ENSTNIG00000007326	-	73	66.917	Tetraodon_nigroviridis
ENSONIG00000020289	mbd1b	50	37.561	ENSUMAG00000002947	MBD1	59	36.686	Ursus_maritimus
ENSONIG00000020289	mbd1b	99	61.566	ENSXMAG00000005628	mbd1b	89	65.691	Xiphophorus_maculatus