EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSONIG00000020296 (Gene tree)
Gene ID: 100695818
Gene Symbol: si:dkey-13a21.4
Alias: -
Full Name: si:dkey-13a21.4
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Minus strand
Length: 7014 bases
Position: chrGL831152.1:3116168-3123181
Accession: ZDB-GENE-040724-163
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000025574	MMR_HSR1	PF01926.23	7.7e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000025595	-	615	-	ENSONIP00000025574	204 (aa)	-	I3KWS8
ENSONIT00000025594	-	585	-	ENSONIP00000025573	194 (aa)	-	I3KWS7

Gene Model

Click here to download ENSONIG00000020296's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000020296's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSONIG00000020296	si:dkey-13a21.4	80	33.735	ENSONIG00000009008	dnajc27	62	33.735
ENSONIG00000020296	si:dkey-13a21.4	63	37.209	ENSONIG00000016776	RAB17	68	37.795
ENSONIG00000020296	si:dkey-13a21.4	85	34.857	ENSONIG00000000558	-	80	34.857
ENSONIG00000020296	si:dkey-13a21.4	96	36.946	ENSONIG00000006715	-	85	36.946
ENSONIG00000020296	si:dkey-13a21.4	77	39.873	ENSONIG00000015990	rab35b	76	39.873
ENSONIG00000020296	si:dkey-13a21.4	72	39.189	ENSONIG00000011542	-	89	39.189
ENSONIG00000020296	si:dkey-13a21.4	96	33.831	ENSONIG00000004394	rab6a	94	33.831
ENSONIG00000020296	si:dkey-13a21.4	96	33.831	ENSONIG00000009886	rab6bb	94	33.831
ENSONIG00000020296	si:dkey-13a21.4	77	36.250	ENSONIG00000008545	RAB39B	74	36.250
ENSONIG00000020296	si:dkey-13a21.4	63	34.109	ENSONIG00000014885	rabl2	55	34.109
ENSONIG00000020296	si:dkey-13a21.4	82	37.500	ENSONIG00000009443	si:dkey-16l2.16	97	33.333
ENSONIG00000020296	si:dkey-13a21.4	91	39.247	ENSONIG00000005708	rab30	90	39.247
ENSONIG00000020296	si:dkey-13a21.4	96	34.328	ENSONIG00000002774	RAB41	92	34.328
ENSONIG00000020296	si:dkey-13a21.4	82	53.846	ENSONIG00000020581	rab9b	83	53.846
ENSONIG00000020296	si:dkey-13a21.4	94	31.068	ENSONIG00000005519	rab34b	80	31.068
ENSONIG00000020296	si:dkey-13a21.4	73	38.667	ENSONIG00000011559	rab33ba	61	38.667
ENSONIG00000020296	si:dkey-13a21.4	81	34.940	ENSONIG00000002284	rab25b	78	34.940
ENSONIG00000020296	si:dkey-13a21.4	81	37.209	ENSONIG00000014892	RAB29	81	37.209
ENSONIG00000020296	si:dkey-13a21.4	96	34.286	ENSONIG00000003367	-	99	34.286
ENSONIG00000020296	si:dkey-13a21.4	81	35.542	ENSONIG00000002410	rab25a	77	35.542
ENSONIG00000020296	si:dkey-13a21.4	99	34.158	ENSONIG00000009749	rab23	83	34.158
ENSONIG00000020296	si:dkey-13a21.4	96	35.294	ENSONIG00000015828	rab33a	71	35.294
ENSONIG00000020296	si:dkey-13a21.4	74	31.788	ENSONIG00000009978	si:cabz01085950.1	73	31.788
ENSONIG00000020296	si:dkey-13a21.4	80	34.756	ENSONIG00000001113	rab5c	73	34.756
ENSONIG00000020296	si:dkey-13a21.4	100	51.429	ENSONIG00000020336	RAB7A	100	51.429
ENSONIG00000020296	si:dkey-13a21.4	80	30.120	ENSONIG00000021230	-	78	30.120
ENSONIG00000020296	si:dkey-13a21.4	77	31.707	ENSONIG00000004448	si:ch73-116o1.2	75	31.707
ENSONIG00000020296	si:dkey-13a21.4	77	35.625	ENSONIG00000002535	rab11ba	71	35.625
ENSONIG00000020296	si:dkey-13a21.4	88	37.989	ENSONIG00000018673	rab18b	86	37.989
ENSONIG00000020296	si:dkey-13a21.4	88	33.333	ENSONIG00000013175	rab34a	68	33.333
ENSONIG00000020296	si:dkey-13a21.4	84	36.723	ENSONIG00000003725	rab18a	85	36.723
ENSONIG00000020296	si:dkey-13a21.4	96	48.241	ENSONIG00000020675	rab9a	95	48.241
ENSONIG00000020296	si:dkey-13a21.4	82	37.059	ENSONIG00000018469	rab12	68	37.059
ENSONIG00000020296	si:dkey-13a21.4	82	32.941	ENSONIG00000016851	-	76	32.941
ENSONIG00000020296	si:dkey-13a21.4	71	30.345	ENSONIG00000014717	kras	81	30.769
ENSONIG00000020296	si:dkey-13a21.4	86	33.898	ENSONIG00000005781	rab15	81	33.898
ENSONIG00000020296	si:dkey-13a21.4	79	38.889	ENSONIG00000006819	-	77	38.889
ENSONIG00000020296	si:dkey-13a21.4	79	37.654	ENSONIG00000002065	rab1ba	77	37.654
ENSONIG00000020296	si:dkey-13a21.4	95	35.052	ENSONIG00000006876	rab22a	97	35.052
ENSONIG00000020296	si:dkey-13a21.4	80	34.731	ENSONIG00000010435	rab11bb	74	34.731
ENSONIG00000020296	si:dkey-13a21.4	97	51.244	ENSONIG00000019036	-	97	51.244
ENSONIG00000020296	si:dkey-13a21.4	96	30.392	ENSONIG00000015072	RAB11A	93	30.392
ENSONIG00000020296	si:dkey-13a21.4	86	38.418	ENSONIG00000006340	rab13	86	38.418
ENSONIG00000020296	si:dkey-13a21.4	79	36.810	ENSONIG00000016622	rab2a	75	36.810
ENSONIG00000020296	si:dkey-13a21.4	86	32.768	ENSONIG00000012069	RAB15	82	32.768
ENSONIG00000020296	si:dkey-13a21.4	77	34.177	ENSONIG00000002281	rab11al	71	34.177
ENSONIG00000020296	si:dkey-13a21.4	87	34.637	ENSONIG00000002425	rab5aa	81	34.637
ENSONIG00000020296	si:dkey-13a21.4	80	53.049	ENSONIG00000020945	-	81	53.049
ENSONIG00000020296	si:dkey-13a21.4	80	34.756	ENSONIG00000016279	-	72	34.756
ENSONIG00000020296	si:dkey-13a21.4	85	34.286	ENSONIG00000014099	rab14	80	34.286
ENSONIG00000020296	si:dkey-13a21.4	77	36.420	ENSONIG00000006997	-	73	36.420
ENSONIG00000020296	si:dkey-13a21.4	77	35.625	ENSONIG00000002544	-	71	35.625
ENSONIG00000020296	si:dkey-13a21.4	72	31.293	ENSONIG00000007797	rras	76	32.075

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000020296	si:dkey-13a21.4	100	90.686	ENSACIG00000011024	si:dkey-13a21.4	100	90.686	Amphilophus_citrinellus
ENSONIG00000020296	si:dkey-13a21.4	100	86.275	ENSAOCG00000020491	si:dkey-13a21.4	100	86.275	Amphiprion_ocellaris
ENSONIG00000020296	si:dkey-13a21.4	100	86.275	ENSAPEG00000023338	si:dkey-13a21.4	92	86.275	Amphiprion_percula
ENSONIG00000020296	si:dkey-13a21.4	100	83.333	ENSATEG00000014958	si:dkey-13a21.4	100	83.333	Anabas_testudineus
ENSONIG00000020296	si:dkey-13a21.4	96	51.282	ENSACAG00000012345	-	97	51.282	Anolis_carolinensis
ENSONIG00000020296	si:dkey-13a21.4	100	98.039	ENSACLG00000021109	si:dkey-13a21.4	99	98.039	Astatotilapia_calliptera
ENSONIG00000020296	si:dkey-13a21.4	100	53.738	ENSAMXG00000032663	si:dkey-13a21.4	99	53.738	Astyanax_mexicanus
ENSONIG00000020296	si:dkey-13a21.4	89	58.152	WBGene00004271	rab-7	100	52.857	Caenorhabditis_elegans
ENSONIG00000020296	si:dkey-13a21.4	100	85.294	ENSCVAG00000001150	si:dkey-13a21.4	100	85.294	Cyprinodon_variegatus
ENSONIG00000020296	si:dkey-13a21.4	96	62.564	ENSDARG00000026098	si:dkey-13a21.4	95	62.564	Danio_rerio
ENSONIG00000020296	si:dkey-13a21.4	87	52.222	ENSDNOG00000043559	-	96	49.495	Dasypus_novemcinctus
ENSONIG00000020296	si:dkey-13a21.4	100	82.927	ENSFHEG00000002502	si:dkey-13a21.4	100	82.927	Fundulus_heteroclitus
ENSONIG00000020296	si:dkey-13a21.4	100	82.353	ENSGAFG00000020102	si:dkey-13a21.4	100	82.353	Gambusia_affinis
ENSONIG00000020296	si:dkey-13a21.4	100	98.529	ENSHBUG00000014023	si:dkey-13a21.4	99	98.529	Haplochromis_burtoni
ENSONIG00000020296	si:dkey-13a21.4	86	78.977	ENSKMAG00000021039	si:dkey-13a21.4	74	78.977	Kryptolebias_marmoratus
ENSONIG00000020296	si:dkey-13a21.4	100	84.804	ENSLBEG00000018180	si:dkey-13a21.4	100	84.804	Labrus_bergylta
ENSONIG00000020296	si:dkey-13a21.4	100	60.680	ENSLOCG00000014749	si:dkey-13a21.4	100	60.680	Lepisosteus_oculatus
ENSONIG00000020296	si:dkey-13a21.4	86	52.571	ENSLAFG00000028984	-	85	52.571	Loxodonta_africana
ENSONIG00000020296	si:dkey-13a21.4	100	85.784	ENSMAMG00000021095	si:dkey-13a21.4	100	85.784	Mastacembelus_armatus
ENSONIG00000020296	si:dkey-13a21.4	100	97.549	ENSMZEG00005010220	si:dkey-13a21.4	99	97.549	Maylandia_zebra
ENSONIG00000020296	si:dkey-13a21.4	99	97.537	ENSNBRG00000023214	si:dkey-13a21.4	99	97.537	Neolamprologus_brichardi
ENSONIG00000020296	si:dkey-13a21.4	100	80.392	ENSORLG00000025098	si:dkey-13a21.4	100	80.392	Oryzias_latipes
ENSONIG00000020296	si:dkey-13a21.4	100	79.902	ENSORLG00020019465	si:dkey-13a21.4	100	79.902	Oryzias_latipes_hni
ENSONIG00000020296	si:dkey-13a21.4	100	80.392	ENSORLG00015015121	si:dkey-13a21.4	100	80.392	Oryzias_latipes_hsok
ENSONIG00000020296	si:dkey-13a21.4	96	63.452	ENSPKIG00000008691	si:dkey-13a21.4	96	63.452	Paramormyrops_kingsleyae
ENSONIG00000020296	si:dkey-13a21.4	99	78.607	ENSPMGG00000023170	si:dkey-13a21.4	96	78.607	Periophthalmus_magnuspinnatus
ENSONIG00000020296	si:dkey-13a21.4	100	82.843	ENSPFOG00000015409	si:dkey-13a21.4	100	82.843	Poecilia_formosa
ENSONIG00000020296	si:dkey-13a21.4	100	82.843	ENSPLAG00000019688	si:dkey-13a21.4	100	82.843	Poecilia_latipinna
ENSONIG00000020296	si:dkey-13a21.4	100	82.843	ENSPMEG00000019159	si:dkey-13a21.4	100	82.843	Poecilia_mexicana
ENSONIG00000020296	si:dkey-13a21.4	100	82.353	ENSPREG00000022241	si:dkey-13a21.4	100	82.353	Poecilia_reticulata
ENSONIG00000020296	si:dkey-13a21.4	100	98.039	ENSPNYG00000018613	si:dkey-13a21.4	99	98.039	Pundamilia_nyererei
ENSONIG00000020296	si:dkey-13a21.4	100	45.238	YML001W	YPT7	100	45.238	Saccharomyces_cerevisiae
ENSONIG00000020296	si:dkey-13a21.4	96	63.776	ENSSFOG00015009566	si:dkey-13a21.4	96	63.776	Scleropages_formosus
ENSONIG00000020296	si:dkey-13a21.4	98	84.925	ENSSMAG00000013945	si:dkey-13a21.4	97	84.925	Scophthalmus_maximus
ENSONIG00000020296	si:dkey-13a21.4	100	90.196	ENSSDUG00000019738	si:dkey-13a21.4	100	90.196	Seriola_dumerili
ENSONIG00000020296	si:dkey-13a21.4	100	89.706	ENSSLDG00000011597	si:dkey-13a21.4	100	89.706	Seriola_lalandi_dorsalis
ENSONIG00000020296	si:dkey-13a21.4	96	50.769	ENSXETG00000014257	mgc75872	97	50.769	Xenopus_tropicalis